Cow genome map

Conread name: mE4-MI-P-E4-aik-h-12-1-UM.s1

Conread position: 2-163
Cow position: chr22:14430365-14430526 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 4-168
Cow position: chr22:14468192-14468356 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-163
Cow position: chr22:14430286-14430442 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 78

Conread position: 7-167
Cow position: chr22:14430790-14430946 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 136, 0

Conread position: 8-161
Cow position: chr22:14468111-14468265 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 7, 96

Conread position: 10-164
Cow position: chr22:46654068-46654222 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 75

Conread position: 11-163
Cow position: chr22:14430122-14430274 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 11-164
Cow position: chr22:14430206-14430359 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 13-162
Cow position: chr22:14430460-14430609 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 17-163
Cow position: chr22:46654159-46654305 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 91

Conread position: 17-163
Cow position: chr22:46654327-46654473 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 91

Conread position: 17-167
Cow position: chr22:11641256-11641406 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 107
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 19-164
Cow position: chr22:12399696-12399551 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 59, 82

Conread position: 19-164
Cow position: chr22:14429878-14430023 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 25-167
Cow position: chr22:14468045-14468187 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 31-164
Cow position: chr22:14429806-14429939 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 64

Conread position: 31-164
Cow position: chr22:46654257-46654390 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 54

Conread position: 177-441
Cow position: chr22:14430663-14430926 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 41

Conread position: 177-461
Cow position: chr22:12431731-12431448 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 188
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 55

Conread position: 177-488
Cow position: chr22:14430579-14430889 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 39, 63

Conread position: 177-615
Cow position: chr22:12499383-12499832 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 292
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 34

Conread position: 180-542
Cow position: chr22:14429910-14430274 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 40

Conread position: 182-455
Cow position: chr22:11701199-11701471 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 177
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 136, 50

Conread position: 182-542
Cow position: chr22:14468157-14468519 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 58

Conread position: 182-547
Cow position: chr22:11666545-11666912 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 238
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 39

Conread position: 182-552
Cow position: chr22:14430416-14430788 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 239
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 123, 37

Conread position: 182-558
Cow position: chr22:12475955-12475576 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 254
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 46, 38

Conread position: 183-464
Cow position: chr22:12458593-12458313 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 203, 28

Conread position: 183-542
Cow position: chr22:14442143-14442504 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 59

Conread position: 183-615
Cow position: chr22:14468326-14468759 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 289
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 59

Conread position: 184-426
Cow position: chr22:12475533-12475292 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 39

Conread position: 184-545
Cow position: chr22:14429830-14430193 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 27

Conread position: 184-546
Cow position: chr22:14430250-14430614 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 34, 40

Conread position: 184-558
Cow position: chr22:14430082-14430458 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 36

Conread position: 192-455
Cow position: chr22:12430960-12430698 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 28

Conread position: 193-550
Cow position: chr22:14468000-14468359 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 192, 31

Conread position: 220-459
Cow position: chr22:12431017-12430778 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 68, 89

Conread position: 224-540
Cow position: chr22:46654068-46654387 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 211
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 82, 71

Conread position: 226-541
Cow position: chr22:12385355-12385039 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 206
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 70, 17

Conread position: 231-542
Cow position: chr22:14442024-14442336 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 209
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 80, 8

Conread position: 232-459
Cow position: chr22:46654328-46654555 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 64, 90

Conread position: 232-540
Cow position: chr22:12399613-12399302 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 210
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 72, 85

Conread position: 232-541
Cow position: chr22:12399193-12398881 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 75, 82

Conread position: 232-545
Cow position: chr22:12431593-12431277 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 86

Conread position: 233-478
Cow position: chr22:12475569-12475324 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 76

Conread position: 233-543
Cow position: chr22:12399360-12399047 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 63, 84

Conread position: 239-558
Cow position: chr22:14429800-14430122 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 70

Conread position: 240-542
Cow position: chr22:12458369-12458064 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 196
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 67

Conread position: 244-540
Cow position: chr22:46654256-46654555 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 62, 51

Conread position: 244-542
Cow position: chr22:12499281-12499582 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 64, 74

Show alignments to all cow chromosomes.