Cow genome map
| Conread name: | mE4-MI-P-E4-aik-h-12-1-UM.s1 |
| Conread position: | 11-168 |
| Cow position: | chrX:12627912-12628069 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-171 |
| Cow position: | chrX:12627493-12627653 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 75, 94 |
| Conread position: | 14-157 |
| Cow position: | chrX:12627663-12627806 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-167 |
| Cow position: | chrX:12627329-12627482 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-161 |
| Cow position: | chrX:25309951-25310095 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 177-461 |
| Cow position: | chrX:29045252-29044969 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 177-542 |
| Cow position: | chrX:25325579-25325212 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 114, 36 |
| Conread position: | 177-555 |
| Cow position: | chrX:29045084-29044704 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 32 |
| Conread position: | 180-541 |
| Cow position: | chrX:12627617-12627979 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 47 |
| Conread position: | 184-459 |
| Cow position: | chrX:12627788-12628062 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 31, 37 |
| Conread position: | 186-543 |
| Cow position: | chrX:12627288-12627646 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 37 |
| Conread position: | 191-461 |
| Cow position: | chrX:25324557-25324288 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 191-542 |
| Cow position: | chrX:25324977-25324624 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 191-544 |
| Cow position: | chrX:25310080-25310435 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 310, 20 |
| Conread position: | 217-462 |
| Cow position: | chrX:29045696-29045451 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 79, 89 |
| Conread position: | 220-542 |
| Cow position: | chrX:25310190-25310517 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 13, 79 |
| Conread position: | 223-542 |
| Cow position: | chrX:25325448-25325128 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 226-540 |
| Cow position: | chrX:25309696-25310011 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 70, 10 |
| Conread position: | 232-459 |
| Cow position: | chrX:25309952-25310179 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 233-466 |
| Cow position: | chrX:25325272-25325039 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 233-559 |
| Cow position: | chrX:25310037-25310367 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 84 |
Show alignments to all cow chromosomes.