Cow genome map
| Conread name: | mE6-MI-P-E6-ace-g-06-1-UM.s1 |
| Conread position: | 3-241 |
| Cow position: | chr10:25564847-25564599 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 3-329 |
| Cow position: | chr10:37770783-37771118 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-543 |
| Cow position: | chr10:23440744-23440193 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 340 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 192 |
| Conread position: | 3-583 |
| Cow position: | chr10:31538081-31538661 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 111 |
| Conread position: | 3-627 |
| Cow position: | chr10:62408433-62407789 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 406 |
| Conread position: | 3-669 |
| Cow position: | chr10:8326880-8326223 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 154 |
| Conread position: | 3-672 |
| Cow position: | chr10:14335430-14334750 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 210 |
| Conread position: | 3-672 |
| Cow position: | chr10:16925948-16926628 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 273 |
| Conread position: | 3-672 |
| Cow position: | chr10:29846234-29845549 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 205 |
| Conread position: | 3-672 |
| Cow position: | chr10:38344943-38344261 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 193 |
| Conread position: | 3-672 |
| Cow position: | chr10:66899945-66899270 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 3-673 |
| Cow position: | chr10:38538086-38537401 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 406 |
| Conread position: | 3-675 |
| Cow position: | chr10:21487333-21488019 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 405 |
| Conread position: | 3-677 |
| Cow position: | chr10:8290395-8291083 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 6 |
| Conread position: | 3-679 |
| Cow position: | chr10:22101650-22102344 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 3-681 |
| Cow position: | chr10:19512022-19512698 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 400 |
| Conread position: | 3-681 |
| Cow position: | chr10:39040884-39040199 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 3-683 |
| Cow position: | chr10:2120596-2119907 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 398 |
| Conread position: | 3-683 |
| Cow position: | chr10:11821178-11821862 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 5 |
| Conread position: | 3-683 |
| Cow position: | chr10:24977348-24976660 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 397 |
| Conread position: | 3-683 |
| Cow position: | chr10:30685097-30684400 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 244 |
| Conread position: | 3-683 |
| Cow position: | chr10:57989576-57988886 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 402 |
| Conread position: | 4-673 |
| Cow position: | chr10:41877329-41878017 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 284 |
| Conread position: | 4-678 |
| Cow position: | chr10:7281676-7280986 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 405 |
| Conread position: | 5-683 |
| Cow position: | chr10:40151829-40151136 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 176 |
| Conread position: | 8-633 |
| Cow position: | chr10:21883214-21883850 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 398 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 8-681 |
| Cow position: | chr10:38545487-38544811 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 18-680 |
| Cow position: | chr10:26597046-26597719 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 30-679 |
| Cow position: | chr10:29102136-29101492 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 155 |
| Conread position: | 41-681 |
| Cow position: | chr10:50135015-50135675 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 68-672 |
| Cow position: | chr10:124876-125490 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 333 |
| Conread position: | 69-677 |
| Cow position: | chr10:280123-279504 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 327 |
| Conread position: | 78-672 |
| Cow position: | chr10:19544871-19544280 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 37 |
| Conread position: | 78-679 |
| Cow position: | chr10:42110909-42111528 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 6 |
| Conread position: | 78-679 |
| Cow position: | chr10:42749346-42749930 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 43 |
| Conread position: | 79-619 |
| Cow position: | chr10:60314228-60314764 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 338 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 8, 198 |
| Conread position: | 93-562 |
| Cow position: | chr10:33347857-33348335 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 95 |
| Conread position: | 106-354 |
| Cow position: | chr10:32316156-32315916 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 108-658 |
| Cow position: | chr10:51210476-51211027 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 341 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 125, 23 |
| Conread position: | 118-429 |
| Cow position: | chr10:20370574-20370268 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 98, 53 |
| Conread position: | 150-640 |
| Cow position: | chr10:29632200-29631700 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 7 |
| Conread position: | 209-672 |
| Cow position: | chr10:29723427-29722955 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 296 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 152, 15 |
| Conread position: | 222-628 |
| Cow position: | chr10:16477404-16477801 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 280 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 123, 43 |
| Conread position: | 267-683 |
| Cow position: | chr10:57556652-57556230 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 124 |
| Conread position: | 295-671 |
| Cow position: | chr10:1378222-1378605 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 305-670 |
| Cow position: | chr10:14862428-14862782 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 170, 34 |
| Conread position: | 308-681 |
| Cow position: | chr10:39779390-39779014 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 88 |
| Conread position: | 321-672 |
| Cow position: | chr10:32701477-32701823 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 15 |
| Conread position: | 385-678 |
| Cow position: | chr10:28982855-28982557 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 385-682 |
| Cow position: | chr10:47083962-47083660 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 12, 55 |
| Conread position: | 386-628 |
| Cow position: | chr10:22303677-22303436 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 410-673 |
| Cow position: | chr10:20370244-20369978 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 414-671 |
| Cow position: | chr10:57501656-57501918 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 427-683 |
| Cow position: | chr10:29110292-29110035 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 104 |
| Conread position: | 477-671 |
| Cow position: | chr10:17433246-17433450 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 477-681 |
| Cow position: | chr10:42752029-42752238 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 480-674 |
| Cow position: | chr10:38849209-38849402 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 141, 48 |
| Conread position: | 493-675 |
| Cow position: | chr10:51844278-51844094 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 131 |
| Conread position: | 494-680 |
| Cow position: | chr10:58097099-58096910 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 173 |
| Conread position: | 495-682 |
| Cow position: | chr10:64145849-64146036 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 109 |
| Conread position: | 501-679 |
| Cow position: | chr10:39439290-39439458 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 131, 31 |
Show alignments to all cow chromosomes.