Cow genome map
| Conread name: | mE6-MI-P-E6-ace-g-06-1-UM.s1 |
| Conread position: | 2-672 |
| Cow position: | chr14:17001065-17000380 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 128 |
| Conread position: | 2-677 |
| Cow position: | chr14:45081042-45081733 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 3-135 |
| Cow position: | chr14:16919692-16919554 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 3-489 |
| Cow position: | chr14:45302954-45302480 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 3-497 |
| Cow position: | chr14:43557969-43558474 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 385 |
| Conread position: | 3-559 |
| Cow position: | chr14:13303019-13303587 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 252 |
| Conread position: | 3-607 |
| Cow position: | chr14:45161095-45161706 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 283 |
| Conread position: | 3-610 |
| Cow position: | chr14:41475104-41475733 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 391 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 109 |
| Conread position: | 3-642 |
| Cow position: | chr14:44256982-44256327 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 3-666 |
| Cow position: | chr14:45206308-45206985 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 145 |
| Conread position: | 3-670 |
| Cow position: | chr14:13778952-13779617 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 3-670 |
| Cow position: | chr14:45189773-45189100 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 114 |
| Conread position: | 3-671 |
| Cow position: | chr14:5511820-5512502 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 208 |
| Conread position: | 3-671 |
| Cow position: | chr14:12743074-12742389 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 390 |
| Conread position: | 3-671 |
| Cow position: | chr14:48254305-48253633 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 395 |
| Conread position: | 3-671 |
| Cow position: | chr14:48825291-48825965 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 228 |
| Conread position: | 3-673 |
| Cow position: | chr14:22031424-22030766 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 209 |
| Conread position: | 3-674 |
| Cow position: | chr14:5529060-5529752 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 3-677 |
| Cow position: | chr14:13864084-13863412 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 18 |
| Conread position: | 3-677 |
| Cow position: | chr14:16273298-16272612 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 3-677 |
| Cow position: | chr14:19328272-19327583 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 228 |
| Conread position: | 3-678 |
| Cow position: | chr14:7472365-7473042 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 3-680 |
| Cow position: | chr14:13621141-13620463 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 3-680 |
| Cow position: | chr14:44287253-44286564 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 317 |
| Conread position: | 3-680 |
| Cow position: | chr14:44377806-44378485 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 3-681 |
| Cow position: | chr14:20782454-20783146 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 198 |
| Conread position: | 3-681 |
| Cow position: | chr14:47641721-47642398 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 169 |
| Conread position: | 3-682 |
| Cow position: | chr14:11154168-11153469 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 403 |
| Conread position: | 3-683 |
| Cow position: | chr14:33237037-33237715 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 96 |
| Conread position: | 5-177 |
| Cow position: | chr14:45834144-45834324 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 8-680 |
| Cow position: | chr14:44551890-44552566 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 295 |
| Conread position: | 8-680 |
| Cow position: | chr14:44581369-44582040 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 18-682 |
| Cow position: | chr14:12610470-12611139 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 17 |
| Conread position: | 56-681 |
| Cow position: | chr14:44226454-44227088 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 12 |
| Conread position: | 68-671 |
| Cow position: | chr14:32446863-32447471 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 335 |
| Conread position: | 68-672 |
| Cow position: | chr14:15276162-15275554 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 48 |
| Conread position: | 78-681 |
| Cow position: | chr14:38147093-38147697 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 94-672 |
| Cow position: | chr14:33401783-33402364 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 306 |
| Conread position: | 112-672 |
| Cow position: | chr14:190074-190647 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 290 |
| Conread position: | 144-673 |
| Cow position: | chr14:12899245-12899776 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 255 |
| Conread position: | 149-651 |
| Cow position: | chr14:16344003-16343489 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 49 |
| Conread position: | 153-672 |
| Cow position: | chr14:16919559-16919038 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 8 |
| Conread position: | 174-682 |
| Cow position: | chr14:17760694-17760191 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 99 |
| Conread position: | 184-683 |
| Cow position: | chr14:35385888-35385384 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 212 |
| Conread position: | 188-680 |
| Cow position: | chr14:44288964-44288468 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 124 |
| Conread position: | 192-683 |
| Cow position: | chr14:37455854-37455375 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 110 |
| Conread position: | 211-682 |
| Cow position: | chr14:44131112-44131574 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 176 |
| Conread position: | 228-683 |
| Cow position: | chr14:2294504-2294965 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 163 |
| Conread position: | 247-683 |
| Cow position: | chr14:44676372-44676806 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 123 |
| Conread position: | 252-683 |
| Cow position: | chr14:48602071-48601650 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 21 |
| Conread position: | 265-680 |
| Cow position: | chr14:11561749-11561342 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 70 |
| Conread position: | 288-682 |
| Cow position: | chr14:45711426-45711033 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 108 |
| Conread position: | 295-682 |
| Cow position: | chr14:37224487-37224880 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 101 |
| Conread position: | 297-675 |
| Cow position: | chr14:47655606-47655985 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 48, 99 |
| Conread position: | 299-672 |
| Cow position: | chr14:9100418-9100041 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 305-683 |
| Cow position: | chr14:40341362-40341742 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 306-672 |
| Cow position: | chr14:35365943-35365579 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 40, 53 |
| Conread position: | 315-682 |
| Cow position: | chr14:38531139-38530770 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 340-662 |
| Cow position: | chr14:46465669-46465990 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 191, 38 |
| Conread position: | 340-683 |
| Cow position: | chr14:44689401-44689746 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 53 |
| Conread position: | 377-663 |
| Cow position: | chr14:30735363-30735647 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 78, 40 |
| Conread position: | 378-681 |
| Cow position: | chr14:13461972-13462269 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 59 |
| Conread position: | 382-678 |
| Cow position: | chr14:50111176-50111474 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 56 |
| Conread position: | 386-681 |
| Cow position: | chr14:48404577-48404282 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 393-683 |
| Cow position: | chr14:13273999-13274290 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 82, 44 |
| Conread position: | 401-683 |
| Cow position: | chr14:29775811-29775526 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 28 |
| Conread position: | 404-680 |
| Cow position: | chr14:50138972-50139250 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 412-662 |
| Cow position: | chr14:5074383-5074636 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 63, 25 |
| Conread position: | 418-683 |
| Cow position: | chr14:34776643-34776909 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 454-683 |
| Cow position: | chr14:9514832-9514592 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 455-643 |
| Cow position: | chr14:50393597-50393405 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 481-672 |
| Cow position: | chr14:37413259-37413064 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 50, 94 |
| Conread position: | 494-682 |
| Cow position: | chr14:49046102-49046292 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 495-679 |
| Cow position: | chr14:43558737-43558924 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 31, 111 |
Show alignments to all cow chromosomes.