Cow genome map
Conread name: | mE6-MI-P-E6-ace-g-06-1-UM.s1 |
Conread position: | 3-306 |
Cow position: | chr15:35753598-35753278 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 3-378 |
Cow position: | chr15:6623093-6623472 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 266 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 18, 117 |
Conread position: | 3-457 |
Cow position: | chr15:7549399-7549859 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 55 |
Conread position: | 3-603 |
Cow position: | chr15:328426-329031 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 233 |
Conread position: | 3-616 |
Cow position: | chr15:7934325-7934953 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 59 |
Conread position: | 3-630 |
Cow position: | chr15:7965967-7965307 (view UCSC Genome Browser custom track) |
Alignm length: | 664 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 117 |
Conread position: | 3-660 |
Cow position: | chr15:14582352-14581690 (view UCSC Genome Browser custom track) |
Alignm length: | 673 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 38 |
Conread position: | 3-662 |
Cow position: | chr15:4812601-4813271 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 484 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 148 |
Conread position: | 3-669 |
Cow position: | chr15:3261335-3260640 (view UCSC Genome Browser custom track) |
Alignm length: | 701 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 203 |
Conread position: | 3-671 |
Cow position: | chr15:19738054-19737369 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 525 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 404 |
Conread position: | 3-672 |
Cow position: | chr15:2076647-2077339 (view UCSC Genome Browser custom track) |
Alignm length: | 696 |
Alignm identity: | 517 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 402 |
Conread position: | 3-672 |
Cow position: | chr15:4671429-4672116 (view UCSC Genome Browser custom track) |
Alignm length: | 696 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 285 |
Conread position: | 3-672 |
Cow position: | chr15:4961645-4962318 (view UCSC Genome Browser custom track) |
Alignm length: | 695 |
Alignm identity: | 499 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 39 |
Conread position: | 3-672 |
Cow position: | chr15:24295093-24295779 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 379 |
Conread position: | 3-673 |
Cow position: | chr15:18576713-18577393 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 524 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 398 |
Conread position: | 3-673 |
Cow position: | chr15:32494388-32493705 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 517 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 403 |
Conread position: | 3-673 |
Cow position: | chr15:35647668-35646990 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 295 |
Conread position: | 3-673 |
Cow position: | chr15:44069919-44070609 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 516 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 405 |
Conread position: | 3-674 |
Cow position: | chr15:18267994-18267296 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 401 |
Conread position: | 3-674 |
Cow position: | chr15:28490148-28489464 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 501 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 196 |
Conread position: | 3-674 |
Cow position: | chr15:31358885-31359560 (view UCSC Genome Browser custom track) |
Alignm length: | 684 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 228 |
Conread position: | 3-675 |
Cow position: | chr15:6078756-6079433 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 18 |
Conread position: | 3-675 |
Cow position: | chr15:21665747-21665062 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 228 |
Conread position: | 3-677 |
Cow position: | chr15:1237684-1238365 (view UCSC Genome Browser custom track) |
Alignm length: | 695 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 125 |
Conread position: | 3-678 |
Cow position: | chr15:8750425-8751090 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 499 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 39 |
Conread position: | 3-679 |
Cow position: | chr15:10888614-10889302 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 18 |
Conread position: | 3-679 |
Cow position: | chr15:44828793-44829490 (view UCSC Genome Browser custom track) |
Alignm length: | 700 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 407 |
Conread position: | 3-680 |
Cow position: | chr15:6471925-6471238 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 399 |
Conread position: | 3-681 |
Cow position: | chr15:444600-445297 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 517 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 142 |
Conread position: | 3-681 |
Cow position: | chr15:6155954-6155252 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 522 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 410 |
Conread position: | 3-681 |
Cow position: | chr15:7544880-7545556 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 94 |
Conread position: | 3-681 |
Cow position: | chr15:8099487-8100160 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 62 |
Conread position: | 3-682 |
Cow position: | chr15:315861-315168 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 136 |
Conread position: | 3-682 |
Cow position: | chr15:524862-524168 (view UCSC Genome Browser custom track) |
Alignm length: | 701 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 387 |
Conread position: | 3-682 |
Cow position: | chr15:4196455-4197153 (view UCSC Genome Browser custom track) |
Alignm length: | 704 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 401 |
Conread position: | 3-682 |
Cow position: | chr15:4922149-4922840 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 291 |
Conread position: | 3-682 |
Cow position: | chr15:5980355-5981037 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 513 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 318 |
Conread position: | 3-682 |
Cow position: | chr15:7837243-7837942 (view UCSC Genome Browser custom track) |
Alignm length: | 703 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 211 |
Conread position: | 3-683 |
Cow position: | chr15:2762682-2763352 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 452 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 38 |
Conread position: | 3-683 |
Cow position: | chr15:3888870-3889570 (view UCSC Genome Browser custom track) |
Alignm length: | 709 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 121 |
Conread position: | 3-683 |
Cow position: | chr15:7234298-7234949 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 482 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 167 |
Conread position: | 3-683 |
Cow position: | chr15:9429940-9430625 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 399 |
Conread position: | 3-683 |
Cow position: | chr15:15347120-15346421 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 529 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 56 |
Conread position: | 3-683 |
Cow position: | chr15:36626296-36625579 (view UCSC Genome Browser custom track) |
Alignm length: | 727 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 351 |
Conread position: | 4-682 |
Cow position: | chr15:32720743-32720054 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 509 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 274 |
Conread position: | 6-682 |
Cow position: | chr15:17080206-17079509 (view UCSC Genome Browser custom track) |
Alignm length: | 708 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 199 |
Conread position: | 8-529 |
Cow position: | chr15:19817971-19818501 (view UCSC Genome Browser custom track) |
Alignm length: | 542 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 139 |
Conread position: | 10-683 |
Cow position: | chr15:20356895-20356228 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 445 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 155 |
Conread position: | 18-683 |
Cow position: | chr15:4651378-4652047 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 70 |
Conread position: | 23-681 |
Cow position: | chr15:21449719-21450360 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 464 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 53 |
Conread position: | 29-627 |
Cow position: | chr15:47772180-47772783 (view UCSC Genome Browser custom track) |
Alignm length: | 617 |
Alignm identity: | 386 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 11, 49 |
Conread position: | 37-680 |
Cow position: | chr15:32693609-32694254 (view UCSC Genome Browser custom track) |
Alignm length: | 664 |
Alignm identity: | 459 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 141 |
Conread position: | 45-670 |
Cow position: | chr15:53137178-53136541 (view UCSC Genome Browser custom track) |
Alignm length: | 642 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 357 |
Conread position: | 79-674 |
Cow position: | chr15:8057376-8057970 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 5 |
Conread position: | 81-539 |
Cow position: | chr15:24717175-24717634 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 42 |
Conread position: | 86-529 |
Cow position: | chr15:34367601-34367157 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 277 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 107, 51 |
Conread position: | 102-673 |
Cow position: | chr15:1782323-1782918 (view UCSC Genome Browser custom track) |
Alignm length: | 600 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 294 |
Conread position: | 130-529 |
Cow position: | chr15:31862425-31862027 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 148 |
Conread position: | 148-682 |
Cow position: | chr15:6592476-6591924 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 12 |
Conread position: | 165-681 |
Cow position: | chr15:8811856-8811334 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 176 |
Conread position: | 177-681 |
Cow position: | chr15:17218084-17217568 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 98 |
Conread position: | 181-669 |
Cow position: | chr15:9003940-9003443 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 184 |
Conread position: | 199-671 |
Cow position: | chr15:9739169-9738706 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 318 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 22, 77 |
Conread position: | 228-662 |
Cow position: | chr15:9912920-9913365 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 167 |
Conread position: | 263-662 |
Cow position: | chr15:4765441-4765849 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 66 |
Conread position: | 291-681 |
Cow position: | chr15:2214605-2214206 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 272 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 48, 153 |
Conread position: | 295-672 |
Cow position: | chr15:4386058-4386441 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 101 |
Conread position: | 295-672 |
Cow position: | chr15:35753017-35752637 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 95 |
Conread position: | 304-619 |
Cow position: | chr15:1300492-1300179 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 26 |
Conread position: | 307-562 |
Cow position: | chr15:32516153-32515899 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 178 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 64, 81 |
Conread position: | 311-682 |
Cow position: | chr15:51217918-51218296 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 85 |
Conread position: | 340-682 |
Cow position: | chr15:36668086-36668439 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 10 |
Conread position: | 340-683 |
Cow position: | chr15:2016917-2017259 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 235 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 52, 16 |
Conread position: | 395-668 |
Cow position: | chr15:2925708-2925987 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 199 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 50, 42 |
Conread position: | 395-683 |
Cow position: | chr15:17293478-17293754 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 208 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 80, 42 |
Conread position: | 396-659 |
Cow position: | chr15:53313169-53313431 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 177 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 56, 14 |
Conread position: | 402-644 |
Cow position: | chr15:51715339-51715580 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 176 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 72, 19 |
Conread position: | 402-678 |
Cow position: | chr15:51675128-51675405 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 205 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 73, 19 |
Conread position: | 404-680 |
Cow position: | chr15:32204024-32204300 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 192 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 11, 31 |
Conread position: | 414-635 |
Cow position: | chr15:6485007-6485232 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 156 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 56, 29 |
Conread position: | 421-682 |
Cow position: | chr15:2902046-2901785 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 192 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 54, 18 |
Conread position: | 437-682 |
Cow position: | chr15:6623659-6623903 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 169 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 38, 94 |
Conread position: | 454-680 |
Cow position: | chr15:13391610-13391377 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 167 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 21, 123 |
Conread position: | 459-657 |
Cow position: | chr15:21948784-21948580 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 144 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 475-681 |
Cow position: | chr15:43619700-43619907 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 145 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 484-681 |
Cow position: | chr15:35736279-35736479 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 148 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 47, 183 |
Conread position: | 496-680 |
Cow position: | chr15:1764829-1765007 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 139 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 513-683 |
Cow position: | chr15:38981244-38981417 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 128 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 18, 154 |
Conread position: | 530-683 |
Cow position: | chr15:6386803-6386650 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 91, 29 |
Show alignments to all cow chromosomes.