Cow genome map
| Conread name: | mE6-MI-P-E6-ace-g-06-1-UM.s1 |
| Conread position: | 2-671 |
| Cow position: | chr19:439000-438316 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 3-473 |
| Cow position: | chr19:172653-173129 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 3-473 |
| Cow position: | chr19:5729271-5729748 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 406 |
| Conread position: | 3-477 |
| Cow position: | chr19:7488754-7489238 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 401 |
| Conread position: | 3-491 |
| Cow position: | chr19:168165-167661 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 401 |
| Conread position: | 3-622 |
| Cow position: | chr19:27052074-27051437 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 228 |
| Conread position: | 3-670 |
| Cow position: | chr19:39390950-39391630 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 99 |
| Conread position: | 3-671 |
| Cow position: | chr19:33873868-33874548 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 107 |
| Conread position: | 3-672 |
| Cow position: | chr19:28581219-28580540 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 229 |
| Conread position: | 3-674 |
| Cow position: | chr19:341661-342345 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 3-680 |
| Cow position: | chr19:4386053-4386752 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 409 |
| Conread position: | 3-681 |
| Cow position: | chr19:2273944-2273252 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 260 |
| Conread position: | 3-682 |
| Cow position: | chr19:3138378-3139064 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 177 |
| Conread position: | 3-682 |
| Cow position: | chr19:39185104-39184405 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 407 |
| Conread position: | 3-682 |
| Cow position: | chr19:40851996-40851317 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 120 |
| Conread position: | 3-683 |
| Cow position: | chr19:162658-162024 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 67 |
| Conread position: | 3-683 |
| Cow position: | chr19:893166-892490 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 177 |
| Conread position: | 4-681 |
| Cow position: | chr19:75810-75128 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 289 |
| Conread position: | 5-683 |
| Cow position: | chr19:204400-205115 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 401 |
| Conread position: | 8-675 |
| Cow position: | chr19:33942051-33942733 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 12-616 |
| Cow position: | chr19:32203593-32204211 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 149 |
| Conread position: | 47-681 |
| Cow position: | chr19:12773602-12774247 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 69 |
| Conread position: | 81-679 |
| Cow position: | chr19:5653165-5652592 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 370 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 280, 28 |
| Conread position: | 98-682 |
| Cow position: | chr19:28406165-28405573 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 209-683 |
| Cow position: | chr19:347668-347197 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 211-683 |
| Cow position: | chr19:50723202-50723686 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 275-657 |
| Cow position: | chr19:9707412-9707024 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 124 |
| Conread position: | 304-683 |
| Cow position: | chr19:190124-190515 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 41, 92 |
| Conread position: | 306-678 |
| Cow position: | chr19:136038-135662 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 25, 87 |
| Conread position: | 307-682 |
| Cow position: | chr19:28594303-28594684 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 344-672 |
| Cow position: | chr19:5028278-5027946 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 51, 43 |
| Conread position: | 387-676 |
| Cow position: | chr19:7489180-7489473 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 405-683 |
| Cow position: | chr19:1588361-1588080 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 457-680 |
| Cow position: | chr19:11522262-11522034 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 212 |
| Conread position: | 462-683 |
| Cow position: | chr19:173141-173372 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 13, 201 |
| Conread position: | 468-671 |
| Cow position: | chr19:5729787-5729992 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 15, 158 |
| Conread position: | 475-660 |
| Cow position: | chr19:39667817-39667636 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 44, 82 |
| Conread position: | 502-658 |
| Cow position: | chr19:1490076-1489919 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 102 |
| Conread position: | 523-681 |
| Cow position: | chr19:28366990-28367147 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 109, 5 |
Show alignments to all cow chromosomes.