Cow genome map
| Conread name: | mE6-MI-P-E6-ace-g-06-1-UM.s1 |
| Conread position: | 3-189 |
| Cow position: | chr2:50983345-50983152 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-293 |
| Cow position: | chr2:28642934-28642642 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 93 |
| Conread position: | 3-297 |
| Cow position: | chr2:28650348-28650042 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-497 |
| Cow position: | chr2:198908-198402 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 286 |
| Conread position: | 3-503 |
| Cow position: | chr2:28620147-28619638 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 167 |
| Conread position: | 3-583 |
| Cow position: | chr2:42332970-42332400 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 3-596 |
| Cow position: | chr2:5813501-5812915 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 184 |
| Conread position: | 3-625 |
| Cow position: | chr2:14777940-14777332 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 223 |
| Conread position: | 3-645 |
| Cow position: | chr2:36053112-36052470 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 3-662 |
| Cow position: | chr2:57335073-57335752 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 401 |
| Conread position: | 3-663 |
| Cow position: | chr2:49604817-49605499 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 261 |
| Conread position: | 3-663 |
| Cow position: | chr2:65938568-65937896 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 277 |
| Conread position: | 3-671 |
| Cow position: | chr2:10268776-10268097 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 177 |
| Conread position: | 3-672 |
| Cow position: | chr2:8118420-8119106 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 404 |
| Conread position: | 3-672 |
| Cow position: | chr2:10186349-10185661 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 106 |
| Conread position: | 3-672 |
| Cow position: | chr2:13045822-13045149 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 228 |
| Conread position: | 3-672 |
| Cow position: | chr2:28793136-28793815 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 229 |
| Conread position: | 3-672 |
| Cow position: | chr2:36030454-36029806 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 3-672 |
| Cow position: | chr2:50077483-50078164 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 216 |
| Conread position: | 3-672 |
| Cow position: | chr2:53329637-53330326 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 403 |
| Conread position: | 3-672 |
| Cow position: | chr2:80293070-80292396 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 228 |
| Conread position: | 3-675 |
| Cow position: | chr2:19011224-19011915 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 254 |
| Conread position: | 3-678 |
| Cow position: | chr2:10611749-10611070 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 83 |
| Conread position: | 3-678 |
| Cow position: | chr2:10732887-10732201 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 188 |
| Conread position: | 3-678 |
| Cow position: | chr2:16900133-16900823 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 402 |
| Conread position: | 3-678 |
| Cow position: | chr2:31297675-31298355 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 405 |
| Conread position: | 3-681 |
| Cow position: | chr2:12224430-12223738 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 339 |
| Conread position: | 3-681 |
| Cow position: | chr2:24146743-24147437 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 59 |
| Conread position: | 3-682 |
| Cow position: | chr2:282809-282115 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 401 |
| Conread position: | 3-682 |
| Cow position: | chr2:5485093-5484425 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 195 |
| Conread position: | 3-682 |
| Cow position: | chr2:14823000-14823659 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 3-682 |
| Cow position: | chr2:36980259-36980954 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 203 |
| Conread position: | 3-682 |
| Cow position: | chr2:74857119-74857794 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 3-683 |
| Cow position: | chr2:11159243-11158543 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 380 |
| Conread position: | 3-683 |
| Cow position: | chr2:44991413-44990728 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 3-683 |
| Cow position: | chr2:52616347-52617048 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 402 |
| Conread position: | 4-674 |
| Cow position: | chr2:47603367-47602701 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 209 |
| Conread position: | 8-672 |
| Cow position: | chr2:41172553-41173232 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 383 |
| Conread position: | 8-683 |
| Cow position: | chr2:5870470-5869809 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 167 |
| Conread position: | 20-672 |
| Cow position: | chr2:38373308-38373946 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 415 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 21, 54 |
| Conread position: | 30-676 |
| Cow position: | chr2:32066171-32065511 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 173 |
| Conread position: | 42-532 |
| Cow position: | chr2:767514-767057 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 341 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 27, 65 |
| Conread position: | 53-604 |
| Cow position: | chr2:26070953-26070392 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 355 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 84 |
| Conread position: | 55-678 |
| Cow position: | chr2:20029356-20029986 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 405 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 154, 13 |
| Conread position: | 66-615 |
| Cow position: | chr2:25888640-25888087 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 331 |
| Conread position: | 66-681 |
| Cow position: | chr2:78742526-78743165 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 35 |
| Conread position: | 70-671 |
| Cow position: | chr2:16075559-16074944 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 72 |
| Conread position: | 79-680 |
| Cow position: | chr2:66308147-66307536 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 318 |
| Conread position: | 84-682 |
| Cow position: | chr2:1690944-1691551 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 114 |
| Conread position: | 92-681 |
| Cow position: | chr2:3834984-3834388 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 186 |
| Conread position: | 95-672 |
| Cow position: | chr2:34051149-34051731 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 42 |
| Conread position: | 100-672 |
| Cow position: | chr2:29030127-29030698 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 44 |
| Conread position: | 106-672 |
| Cow position: | chr2:41150614-41151168 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 138 |
| Conread position: | 116-676 |
| Cow position: | chr2:47810845-47811412 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 283 |
| Conread position: | 124-683 |
| Cow position: | chr2:51617269-51617823 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 74 |
| Conread position: | 152-681 |
| Cow position: | chr2:73193152-73193676 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 156-680 |
| Cow position: | chr2:12480029-12479502 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 158-658 |
| Cow position: | chr2:31900052-31899541 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 178-683 |
| Cow position: | chr2:1113307-1113814 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 213 |
| Conread position: | 198-433 |
| Cow position: | chr2:20920326-20920100 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 141, 20 |
| Conread position: | 224-674 |
| Cow position: | chr2:6961638-6962083 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 49 |
| Conread position: | 230-683 |
| Cow position: | chr2:37789809-37789348 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 321 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 115, 60 |
| Conread position: | 232-680 |
| Cow position: | chr2:32655788-32656230 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 163 |
| Conread position: | 290-598 |
| Cow position: | chr2:50983116-50982808 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 295-671 |
| Cow position: | chr2:24924744-24925129 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 101 |
| Conread position: | 295-672 |
| Cow position: | chr2:28649416-28649034 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 101 |
| Conread position: | 298-675 |
| Cow position: | chr2:28640662-28640286 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 98 |
| Conread position: | 306-675 |
| Cow position: | chr2:78762846-78763225 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 335-594 |
| Cow position: | chr2:72598036-72598289 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 62, 38 |
| Conread position: | 340-662 |
| Cow position: | chr2:5904088-5903763 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 52 |
| Conread position: | 340-670 |
| Cow position: | chr2:45964886-45964554 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 51 |
| Conread position: | 340-672 |
| Cow position: | chr2:13482435-13482088 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 135, 48 |
| Conread position: | 340-672 |
| Cow position: | chr2:53554195-53554519 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 53 |
| Conread position: | 340-673 |
| Cow position: | chr2:42670475-42670140 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 48 |
| Conread position: | 340-674 |
| Cow position: | chr2:52062775-52063111 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 52 |
| Conread position: | 341-674 |
| Cow position: | chr2:62794579-62794903 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 184, 46 |
| Conread position: | 386-682 |
| Cow position: | chr2:81257447-81257746 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 392-678 |
| Cow position: | chr2:55483847-55483574 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 226, 45 |
| Conread position: | 414-671 |
| Cow position: | chr2:64769389-64769131 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 437-673 |
| Cow position: | chr2:20902018-20901781 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 145 |
| Conread position: | 437-683 |
| Cow position: | chr2:53662034-53662283 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 443-682 |
| Cow position: | chr2:20919817-20919571 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 32, 228 |
| Conread position: | 463-678 |
| Cow position: | chr2:63291616-63291397 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 480-680 |
| Cow position: | chr2:52352416-52352616 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 493-682 |
| Cow position: | chr2:16282735-16282921 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 547-681 |
| Cow position: | chr2:247432-247301 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
Show alignments to all cow chromosomes.