Cow genome map
| Conread name: | mE6-MI-P-E6-ace-g-06-1-UM.s1 |
| Conread position: | 2-672 |
| Cow position: | chr20:23469268-23468580 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 406 |
| Conread position: | 3-302 |
| Cow position: | chr20:8003827-8003518 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 57 |
| Conread position: | 3-326 |
| Cow position: | chr20:28161169-28161506 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-355 |
| Cow position: | chr20:12438362-12437996 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 124 |
| Conread position: | 3-562 |
| Cow position: | chr20:22697667-22698230 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 3-563 |
| Cow position: | chr20:18324776-18324215 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 116 |
| Conread position: | 3-578 |
| Cow position: | chr20:30684719-30685307 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 301 |
| Conread position: | 3-604 |
| Cow position: | chr20:8992825-8992202 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 284 |
| Conread position: | 3-635 |
| Cow position: | chr20:21914726-21915365 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 212 |
| Conread position: | 3-671 |
| Cow position: | chr20:13763303-13763987 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 401 |
| Conread position: | 3-671 |
| Cow position: | chr20:23799284-23799965 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 3-672 |
| Cow position: | chr20:15292406-15293084 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 368 |
| Conread position: | 3-673 |
| Cow position: | chr20:18314914-18314265 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 3-681 |
| Cow position: | chr20:29948900-29949596 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 404 |
| Conread position: | 3-682 |
| Cow position: | chr20:8215917-8216607 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 3-682 |
| Cow position: | chr20:15097478-15096788 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 149 |
| Conread position: | 3-682 |
| Cow position: | chr20:19438331-19439008 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 113 |
| Conread position: | 3-683 |
| Cow position: | chr20:823159-823853 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 280 |
| Conread position: | 3-683 |
| Cow position: | chr20:5535336-5536026 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 298 |
| Conread position: | 3-683 |
| Cow position: | chr20:28565198-28564496 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 409 |
| Conread position: | 3-683 |
| Cow position: | chr20:35124894-35125587 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 285 |
| Conread position: | 4-682 |
| Cow position: | chr20:27869596-27870296 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 408 |
| Conread position: | 51-672 |
| Cow position: | chr20:12568968-12569604 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 355 |
| Conread position: | 66-681 |
| Cow position: | chr20:14870480-14869864 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 122 |
| Conread position: | 70-586 |
| Cow position: | chr20:9128250-9127730 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 317 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 139, 92 |
| Conread position: | 94-672 |
| Cow position: | chr20:13434091-13433521 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 277 |
| Conread position: | 105-683 |
| Cow position: | chr20:24616352-24615774 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 147 |
| Conread position: | 111-683 |
| Cow position: | chr20:19355292-19355861 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 79 |
| Conread position: | 119-672 |
| Cow position: | chr20:17661557-17660991 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 282 |
| Conread position: | 193-662 |
| Cow position: | chr20:37442712-37442236 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 216 |
| Conread position: | 261-676 |
| Cow position: | chr20:21394599-21395014 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 38 |
| Conread position: | 287-683 |
| Cow position: | chr20:10102004-10101612 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 294-682 |
| Cow position: | chr20:15066183-15066573 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 114 |
| Conread position: | 295-671 |
| Cow position: | chr20:25850128-25849740 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 101 |
| Conread position: | 304-675 |
| Cow position: | chr20:28161528-28161905 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 92 |
| Conread position: | 341-671 |
| Cow position: | chr20:7083657-7083328 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 134, 51 |
| Conread position: | 344-671 |
| Cow position: | chr20:31498336-31498014 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 131, 44 |
| Conread position: | 386-673 |
| Cow position: | chr20:12437915-12437626 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 52 |
| Conread position: | 403-657 |
| Cow position: | chr20:872152-871904 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 128, 34 |
| Conread position: | 404-683 |
| Cow position: | chr20:3678630-3678360 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 127, 33 |
| Conread position: | 424-609 |
| Cow position: | chr20:42906028-42906219 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 15 |
Show alignments to all cow chromosomes.