Cow genome map
| Conread name: | mE6-MI-P-E6-ace-g-06-1-UM.s1 |
| Conread position: | 2-674 |
| Cow position: | chr22:6502791-6502114 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 137 |
| Conread position: | 3-508 |
| Cow position: | chr22:3306057-3305553 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 228 |
| Conread position: | 3-572 |
| Cow position: | chr22:34599749-34600306 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 107 |
| Conread position: | 3-618 |
| Cow position: | chr22:27284370-27284997 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 3-628 |
| Cow position: | chr22:24536089-24536709 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 3-660 |
| Cow position: | chr22:31334693-31334022 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 228 |
| Conread position: | 3-671 |
| Cow position: | chr22:27309439-27308753 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 404 |
| Conread position: | 3-671 |
| Cow position: | chr22:34168675-34169363 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 406 |
| Conread position: | 3-672 |
| Cow position: | chr22:44934321-44934994 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 405 |
| Conread position: | 3-673 |
| Cow position: | chr22:15313611-15312926 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 146 |
| Conread position: | 3-674 |
| Cow position: | chr22:1520670-1519996 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 70 |
| Conread position: | 3-674 |
| Cow position: | chr22:10909495-10908810 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 280 |
| Conread position: | 3-676 |
| Cow position: | chr22:19143347-19142663 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 250 |
| Conread position: | 3-680 |
| Cow position: | chr22:35907049-35906357 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 168 |
| Conread position: | 3-680 |
| Cow position: | chr22:42991516-42992208 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 406 |
| Conread position: | 3-681 |
| Cow position: | chr22:24950434-24951134 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 401 |
| Conread position: | 3-681 |
| Cow position: | chr22:31313684-31314380 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 191 |
| Conread position: | 3-681 |
| Cow position: | chr22:44396787-44397479 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 398 |
| Conread position: | 3-682 |
| Cow position: | chr22:20240504-20239807 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 3-682 |
| Cow position: | chr22:44369287-44368581 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 116 |
| Conread position: | 3-683 |
| Cow position: | chr22:560360-559673 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 142 |
| Conread position: | 3-683 |
| Cow position: | chr22:6021001-6021698 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 197 |
| Conread position: | 3-683 |
| Cow position: | chr22:11032095-11032782 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 3-683 |
| Cow position: | chr22:18816041-18815344 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 409 |
| Conread position: | 3-683 |
| Cow position: | chr22:36861189-36860500 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 402 |
| Conread position: | 3-683 |
| Cow position: | chr22:39469178-39468484 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 228 |
| Conread position: | 4-682 |
| Cow position: | chr22:37072732-37072049 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 4-683 |
| Cow position: | chr22:12731330-12730647 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 240 |
| Conread position: | 24-657 |
| Cow position: | chr22:13674432-13673800 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 412 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 30-637 |
| Cow position: | chr22:36269602-36270207 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 35-672 |
| Cow position: | chr22:21589713-21590362 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 44-647 |
| Cow position: | chr22:8135725-8135119 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 47-683 |
| Cow position: | chr22:36184141-36184794 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 359 |
| Conread position: | 81-682 |
| Cow position: | chr22:44491457-44492067 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 181 |
| Conread position: | 82-679 |
| Cow position: | chr22:44457480-44458085 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 213 |
| Conread position: | 87-671 |
| Cow position: | chr22:2395563-2394975 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 28 |
| Conread position: | 151-680 |
| Cow position: | chr22:38175600-38176128 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 340 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 80, 124 |
| Conread position: | 193-672 |
| Cow position: | chr22:6332262-6332734 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 25 |
| Conread position: | 198-540 |
| Cow position: | chr22:36129454-36129807 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 203 |
| Conread position: | 222-680 |
| Cow position: | chr22:1322789-1323240 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 15 |
| Conread position: | 227-681 |
| Cow position: | chr22:522819-522361 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 25 |
| Conread position: | 238-659 |
| Cow position: | chr22:6142792-6142375 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 128 |
| Conread position: | 296-683 |
| Cow position: | chr22:36551596-36551214 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 296-683 |
| Cow position: | chr22:44351019-44350626 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 100 |
| Conread position: | 298-662 |
| Cow position: | chr22:23862270-23861906 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 72 |
| Conread position: | 304-673 |
| Cow position: | chr22:37293019-37292640 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 92 |
| Conread position: | 304-683 |
| Cow position: | chr22:291044-290667 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 316-670 |
| Cow position: | chr22:8737648-8737306 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 72 |
| Conread position: | 340-673 |
| Cow position: | chr22:41418608-41418289 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 340-681 |
| Cow position: | chr22:17327764-17327422 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 53 |
| Conread position: | 395-610 |
| Cow position: | chr22:5312125-5312336 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 136, 42 |
| Conread position: | 423-681 |
| Cow position: | chr22:37140673-37140931 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 424-677 |
| Cow position: | chr22:1281958-1281702 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 474-672 |
| Cow position: | chr22:17571976-17571775 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 195 |
| Conread position: | 478-676 |
| Cow position: | chr22:36276448-36276651 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 573-683 |
| Cow position: | chr22:40370376-40370486 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 93 |
Show alignments to all cow chromosomes.