Cow genome map
| Conread name: | mE6-MI-P-E6-ace-g-06-1-UM.s1 |
| Conread position: | 3-257 |
| Cow position: | chr23:17785984-17785717 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-291 |
| Cow position: | chr23:14965407-14965106 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-308 |
| Cow position: | chr23:2794891-2794576 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 154 |
| Conread position: | 3-315 |
| Cow position: | chr23:20302549-20302864 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 170 |
| Conread position: | 3-327 |
| Cow position: | chr23:16616501-16616165 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 300 |
| Conread position: | 3-338 |
| Cow position: | chr23:2757939-2758287 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 188 |
| Conread position: | 3-345 |
| Cow position: | chr23:3014738-3015092 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 314 |
| Conread position: | 3-448 |
| Cow position: | chr23:31447153-31447612 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 401 |
| Conread position: | 3-512 |
| Cow position: | chr23:23830304-23830823 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 3-619 |
| Cow position: | chr23:14948397-14947779 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 325 |
| Conread position: | 3-628 |
| Cow position: | chr23:4360167-4360788 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 3-638 |
| Cow position: | chr23:28913738-28914386 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 124 |
| Conread position: | 3-668 |
| Cow position: | chr23:28217628-28218307 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 401 |
| Conread position: | 3-672 |
| Cow position: | chr23:4640279-4639600 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 3-672 |
| Cow position: | chr23:29451972-29451320 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 3-673 |
| Cow position: | chr23:4817360-4818045 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 179 |
| Conread position: | 3-673 |
| Cow position: | chr23:4889017-4889710 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 3-673 |
| Cow position: | chr23:15177415-15178098 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 398 |
| Conread position: | 3-673 |
| Cow position: | chr23:15219555-15218877 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 3-673 |
| Cow position: | chr23:36031031-36030352 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 401 |
| Conread position: | 3-674 |
| Cow position: | chr23:4510422-4511080 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 147 |
| Conread position: | 3-676 |
| Cow position: | chr23:2716733-2717412 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 403 |
| Conread position: | 3-679 |
| Cow position: | chr23:19489886-19490567 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 230 |
| Conread position: | 3-681 |
| Cow position: | chr23:2341433-2342113 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 305 |
| Conread position: | 3-682 |
| Cow position: | chr23:2312901-2312207 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 282 |
| Conread position: | 3-683 |
| Cow position: | chr23:16615092-16614400 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 3-683 |
| Cow position: | chr23:20155871-20155183 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 337 |
| Conread position: | 3-683 |
| Cow position: | chr23:27399844-27400543 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 406 |
| Conread position: | 4-679 |
| Cow position: | chr23:19950248-19949568 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 230 |
| Conread position: | 8-337 |
| Cow position: | chr23:1024674-1024327 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 342 |
| Conread position: | 21-452 |
| Cow position: | chr23:28077730-28078168 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 88 |
| Conread position: | 21-550 |
| Cow position: | chr23:28108019-28108554 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 149 |
| Conread position: | 21-674 |
| Cow position: | chr23:27970897-27971556 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 369 |
| Conread position: | 21-683 |
| Cow position: | chr23:28025026-28025695 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 381 |
| Conread position: | 27-678 |
| Cow position: | chr23:28368156-28367502 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 376 |
| Conread position: | 41-373 |
| Cow position: | chr23:966956-966614 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 245 |
| Conread position: | 106-670 |
| Cow position: | chr23:3880626-3880063 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 284 |
| Conread position: | 130-680 |
| Cow position: | chr23:2026608-2026047 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 272 |
| Conread position: | 209-676 |
| Cow position: | chr23:22146742-22146272 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 67 |
| Conread position: | 211-672 |
| Cow position: | chr23:15526122-15526593 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 189 |
| Conread position: | 227-672 |
| Cow position: | chr23:11779361-11779808 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 169 |
| Conread position: | 295-453 |
| Cow position: | chr23:14964832-14964672 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 101 |
| Conread position: | 304-649 |
| Cow position: | chr23:7336772-7337124 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 88 |
| Conread position: | 304-663 |
| Cow position: | chr23:14778509-14778151 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 254 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 39, 77 |
| Conread position: | 314-680 |
| Cow position: | chr23:16498566-16498205 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 340-677 |
| Cow position: | chr23:1023263-1022948 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 63, 47 |
| Conread position: | 385-672 |
| Cow position: | chr23:7369279-7369548 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 385-683 |
| Cow position: | chr23:965763-965460 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 286 |
| Conread position: | 386-653 |
| Cow position: | chr23:15042008-15041739 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 393-669 |
| Cow position: | chr23:2781227-2780943 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 82, 44 |
| Conread position: | 393-673 |
| Cow position: | chr23:2758629-2758913 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 50 |
| Conread position: | 393-673 |
| Cow position: | chr23:26837363-26837641 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 397-672 |
| Cow position: | chr23:2576171-2576450 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 40 |
| Conread position: | 410-672 |
| Cow position: | chr23:25683177-25682917 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 436-683 |
| Cow position: | chr23:38581522-38581760 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 41 |
| Conread position: | 438-672 |
| Cow position: | chr23:14964258-14964022 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 37, 230 |
| Conread position: | 446-673 |
| Cow position: | chr23:5873785-5873554 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 29, 131 |
| Conread position: | 459-678 |
| Cow position: | chr23:29402913-29402688 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 461-673 |
| Cow position: | chr23:8286839-8287054 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 19, 136 |
| Conread position: | 463-671 |
| Cow position: | chr23:948980-948773 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 465-682 |
| Cow position: | chr23:1956715-1956930 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 10, 141 |
| Conread position: | 499-681 |
| Cow position: | chr23:26159878-26159692 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 507-670 |
| Cow position: | chr23:13511966-13512134 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
Show alignments to all cow chromosomes.