Cow genome map

Conread name: mE6-MI-P-E6-ace-g-06-1-UM.s1

Conread position: 3-210
Cow position: chr27:27663286-27663501 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 0

Conread position: 3-260
Cow position: chr27:15277724-15277455 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 115

Conread position: 3-372
Cow position: chr27:15046514-15046896 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 262

Conread position: 3-473
Cow position: chr27:893552-894036 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 406

Conread position: 3-645
Cow position: chr27:25804559-25803899 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 18

Conread position: 3-670
Cow position: chr27:26555323-26554649 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 276

Conread position: 3-671
Cow position: chr27:15037247-15036569 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 266

Conread position: 3-671
Cow position: chr27:28078788-28079459 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 59

Conread position: 3-672
Cow position: chr27:1209696-1210381 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 120

Conread position: 3-672
Cow position: chr27:5911206-5911894 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 407

Conread position: 3-679
Cow position: chr27:14460112-14459418 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 407

Conread position: 3-681
Cow position: chr27:9992858-9992164 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 405

Conread position: 3-681
Cow position: chr27:16034056-16033358 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 425

Conread position: 3-682
Cow position: chr27:23335508-23336195 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 401

Conread position: 3-683
Cow position: chr27:9330066-9330769 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 406

Conread position: 4-619
Cow position: chr27:15541668-15542302 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 373

Conread position: 68-683
Cow position: chr27:27196190-27195597 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 45

Conread position: 71-619
Cow position: chr27:24215231-24215771 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 118

Conread position: 149-683
Cow position: chr27:3235045-3234504 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 254

Conread position: 157-619
Cow position: chr27:22672840-22673309 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 294
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 66, 27

Conread position: 165-682
Cow position: chr27:27506650-27507188 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 285

Conread position: 180-682
Cow position: chr27:11095330-11095840 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 212

Conread position: 181-568
Cow position: chr27:21287343-21286943 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 278
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 40, 76

Conread position: 192-554
Cow position: chr27:27663512-27663875 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 31

Conread position: 340-672
Cow position: chr27:15636655-15636321 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 52

Conread position: 407-663
Cow position: chr27:16551218-16551462 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 117, 30

Conread position: 420-672
Cow position: chr27:13898097-13898347 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 55, 17

Conread position: 557-674
Cow position: chr27:27663909-27664026 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 75, 109

Show alignments to all cow chromosomes.