Cow genome map
Conread name: | mE6-MI-P-E6-ace-g-06-1-UM.s1 |
Conread position: | 3-165 |
Cow position: | chr4:33493902-33494072 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 134 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 3-312 |
Cow position: | chr4:17926177-17925855 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 320 |
Conread position: | 3-333 |
Cow position: | chr4:44725162-44725504 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 18 |
Conread position: | 3-374 |
Cow position: | chr4:50980296-50980668 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 238 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 19, 67 |
Conread position: | 3-657 |
Cow position: | chr4:46664593-46665260 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 516 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 404 |
Conread position: | 3-671 |
Cow position: | chr4:43881186-43881863 (view UCSC Genome Browser custom track) |
Alignm length: | 687 |
Alignm identity: | 516 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 225 |
Conread position: | 3-672 |
Cow position: | chr4:6490287-6489605 (view UCSC Genome Browser custom track) |
Alignm length: | 690 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 120 |
Conread position: | 3-672 |
Cow position: | chr4:18516973-18517657 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 94 |
Conread position: | 3-672 |
Cow position: | chr4:25599424-25598741 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 405 |
Conread position: | 3-672 |
Cow position: | chr4:33072750-33072062 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 406 |
Conread position: | 3-672 |
Cow position: | chr4:43319569-43318884 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 400 |
Conread position: | 3-673 |
Cow position: | chr4:36896445-36897132 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 527 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 273 |
Conread position: | 3-676 |
Cow position: | chr4:32212238-32212932 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 404 |
Conread position: | 3-677 |
Cow position: | chr4:34184443-34183777 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 500 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 120 |
Conread position: | 3-678 |
Cow position: | chr4:57984058-57984743 (view UCSC Genome Browser custom track) |
Alignm length: | 699 |
Alignm identity: | 522 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 389 |
Conread position: | 3-680 |
Cow position: | chr4:13493386-13494085 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 62 |
Conread position: | 3-680 |
Cow position: | chr4:31669349-31670040 (view UCSC Genome Browser custom track) |
Alignm length: | 696 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 403 |
Conread position: | 3-682 |
Cow position: | chr4:18424454-18423757 (view UCSC Genome Browser custom track) |
Alignm length: | 706 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 293 |
Conread position: | 3-682 |
Cow position: | chr4:48026474-48027168 (view UCSC Genome Browser custom track) |
Alignm length: | 702 |
Alignm identity: | 525 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 294 |
Conread position: | 5-671 |
Cow position: | chr4:18190478-18191152 (view UCSC Genome Browser custom track) |
Alignm length: | 692 |
Alignm identity: | 507 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 279 |
Conread position: | 5-674 |
Cow position: | chr4:31565225-31564548 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 166 |
Conread position: | 5-676 |
Cow position: | chr4:12241138-12240461 (view UCSC Genome Browser custom track) |
Alignm length: | 696 |
Alignm identity: | 496 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 205 |
Conread position: | 18-605 |
Cow position: | chr4:61694422-61693848 (view UCSC Genome Browser custom track) |
Alignm length: | 601 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 89 |
Conread position: | 50-628 |
Cow position: | chr4:29531753-29531170 (view UCSC Genome Browser custom track) |
Alignm length: | 593 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 116 |
Conread position: | 60-679 |
Cow position: | chr4:27301309-27300710 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 439 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 279, 8 |
Conread position: | 68-559 |
Cow position: | chr4:17587516-17587034 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 325 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 155, 45 |
Conread position: | 69-675 |
Cow position: | chr4:44925362-44924759 (view UCSC Genome Browser custom track) |
Alignm length: | 624 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 35 |
Conread position: | 74-672 |
Cow position: | chr4:39271231-39270644 (view UCSC Genome Browser custom track) |
Alignm length: | 616 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 37 |
Conread position: | 76-681 |
Cow position: | chr4:33595721-33596303 (view UCSC Genome Browser custom track) |
Alignm length: | 610 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 11 |
Conread position: | 81-672 |
Cow position: | chr4:41332869-41333459 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 193 |
Conread position: | 105-608 |
Cow position: | chr4:61108504-61107994 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 338 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 118, 72 |
Conread position: | 152-434 |
Cow position: | chr4:9103504-9103792 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 191 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 39, 243 |
Conread position: | 157-672 |
Cow position: | chr4:603252-603775 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 234 |
Conread position: | 164-600 |
Cow position: | chr4:58689847-58689405 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 108 |
Conread position: | 165-625 |
Cow position: | chr4:64854021-64853551 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 101 |
Conread position: | 177-681 |
Cow position: | chr4:12587590-12588097 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 218 |
Conread position: | 222-682 |
Cow position: | chr4:10881852-10882315 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 55 |
Conread position: | 265-676 |
Cow position: | chr4:28831906-28832321 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 61 |
Conread position: | 292-544 |
Cow position: | chr4:494208-493952 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 179 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 53, 89 |
Conread position: | 295-682 |
Cow position: | chr4:17925583-17925196 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 96 |
Conread position: | 304-672 |
Cow position: | chr4:47254542-47254174 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 260 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 39, 91 |
Conread position: | 306-677 |
Cow position: | chr4:11110887-11110502 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 369 |
Conread position: | 340-671 |
Cow position: | chr4:67681616-67681949 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 52 |
Conread position: | 340-672 |
Cow position: | chr4:16360336-16360673 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 52 |
Conread position: | 340-680 |
Cow position: | chr4:1049836-1049498 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 57 |
Conread position: | 340-683 |
Cow position: | chr4:6206021-6206363 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 38 |
Conread position: | 342-672 |
Cow position: | chr4:44726023-44726353 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 50 |
Conread position: | 344-675 |
Cow position: | chr4:22473781-22474109 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 232 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 5, 44 |
Conread position: | 352-672 |
Cow position: | chr4:16639047-16639369 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 40 |
Conread position: | 402-671 |
Cow position: | chr4:3132115-3131846 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 185 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 78, 27 |
Conread position: | 409-683 |
Cow position: | chr4:19006065-19005786 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 28 |
Conread position: | 424-673 |
Cow position: | chr4:45298579-45298326 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 186 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 51, 13 |
Conread position: | 453-673 |
Cow position: | chr4:33494125-33494350 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 170 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 462-677 |
Cow position: | chr4:49716219-49716430 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 156 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 13, 153 |
Conread position: | 480-682 |
Cow position: | chr4:51042728-51042522 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 156 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 51, 188 |
Conread position: | 486-675 |
Cow position: | chr4:41958983-41959176 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 137 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 525-620 |
Cow position: | chr4:45048549-45048454 (view UCSC Genome Browser custom track) |
Alignm length: | 96 |
Alignm identity: | 81 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.