Cow genome map
| Conread name: | mE6-MI-P-E6-ace-g-06-1-UM.s1 |
| Conread position: | 3-264 |
| Cow position: | chr7:3234286-3234016 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 158 |
| Conread position: | 3-272 |
| Cow position: | chr7:34149502-34149784 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-338 |
| Cow position: | chr7:446227-445884 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 176 |
| Conread position: | 3-531 |
| Cow position: | chr7:32728104-32727573 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 112 |
| Conread position: | 3-618 |
| Cow position: | chr7:41875865-41875247 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 185 |
| Conread position: | 3-626 |
| Cow position: | chr7:24057840-24058483 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 54 |
| Conread position: | 3-671 |
| Cow position: | chr7:8144841-8144149 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 186 |
| Conread position: | 3-671 |
| Cow position: | chr7:39792158-39792854 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 302 |
| Conread position: | 3-672 |
| Cow position: | chr7:10431015-10430338 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 3-672 |
| Cow position: | chr7:34486318-34487001 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 289 |
| Conread position: | 3-673 |
| Cow position: | chr7:33405838-33405157 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 399 |
| Conread position: | 3-674 |
| Cow position: | chr7:1372244-1371559 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 229 |
| Conread position: | 3-675 |
| Cow position: | chr7:24808054-24807369 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 407 |
| Conread position: | 3-675 |
| Cow position: | chr7:48634838-48635512 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 15 |
| Conread position: | 3-676 |
| Cow position: | chr7:994920-995604 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 262 |
| Conread position: | 3-676 |
| Cow position: | chr7:21234608-21233923 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 228 |
| Conread position: | 3-676 |
| Cow position: | chr7:63386137-63386818 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 3-677 |
| Cow position: | chr7:45948748-45948053 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 3-680 |
| Cow position: | chr7:46901677-46900987 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 3-681 |
| Cow position: | chr7:58993994-58994688 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 115 |
| Conread position: | 3-681 |
| Cow position: | chr7:59679251-59679941 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 154 |
| Conread position: | 3-682 |
| Cow position: | chr7:16475-15778 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 3-682 |
| Cow position: | chr7:21127259-21126567 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 252 |
| Conread position: | 3-682 |
| Cow position: | chr7:67799254-67799918 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 3-683 |
| Cow position: | chr7:525374-526072 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 3-683 |
| Cow position: | chr7:11446953-11447655 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 407 |
| Conread position: | 3-683 |
| Cow position: | chr7:14139197-14138500 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 401 |
| Conread position: | 3-683 |
| Cow position: | chr7:55537517-55536832 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 401 |
| Conread position: | 3-683 |
| Cow position: | chr7:68480958-68481642 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 169 |
| Conread position: | 4-682 |
| Cow position: | chr7:21929545-21930232 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 408 |
| Conread position: | 7-682 |
| Cow position: | chr7:51014676-51015362 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 232 |
| Conread position: | 12-680 |
| Cow position: | chr7:38397223-38397908 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 160 |
| Conread position: | 30-658 |
| Cow position: | chr7:53365300-53364668 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 30-681 |
| Cow position: | chr7:65458741-65458092 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 423 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 49, 253 |
| Conread position: | 39-679 |
| Cow position: | chr7:27787073-27787724 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 103 |
| Conread position: | 62-672 |
| Cow position: | chr7:27584249-27583635 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 15 |
| Conread position: | 81-678 |
| Cow position: | chr7:54643993-54643396 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 125-683 |
| Cow position: | chr7:15810949-15810364 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 176-683 |
| Cow position: | chr7:53407208-53407705 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 342 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 44, 188 |
| Conread position: | 185-680 |
| Cow position: | chr7:61578042-61578548 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 216 |
| Conread position: | 212-596 |
| Cow position: | chr7:59683809-59684190 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 11 |
| Conread position: | 222-654 |
| Cow position: | chr7:41532398-41531967 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 253, 133 |
| Conread position: | 226-614 |
| Cow position: | chr7:59138292-59138684 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 272 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 12, 68 |
| Conread position: | 245-663 |
| Cow position: | chr7:27349029-27348599 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 74, 145 |
| Conread position: | 266-673 |
| Cow position: | chr7:13533237-13532817 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 183 |
| Conread position: | 280-679 |
| Cow position: | chr7:39097793-39097414 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 281-669 |
| Cow position: | chr7:21311129-21311504 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 110 |
| Conread position: | 291-671 |
| Cow position: | chr7:67429273-67429655 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 87 |
| Conread position: | 292-669 |
| Cow position: | chr7:33759096-33759476 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 104, 86 |
| Conread position: | 304-671 |
| Cow position: | chr7:64240298-64239919 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 304-673 |
| Cow position: | chr7:5309396-5309027 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 88 |
| Conread position: | 304-682 |
| Cow position: | chr7:29369312-29368928 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 320-660 |
| Cow position: | chr7:5663293-5663628 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 77 |
| Conread position: | 338-671 |
| Cow position: | chr7:19269679-19269348 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 54 |
| Conread position: | 340-672 |
| Cow position: | chr7:1452394-1452732 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 139, 37 |
| Conread position: | 340-680 |
| Cow position: | chr7:445589-445256 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 135, 52 |
| Conread position: | 393-683 |
| Cow position: | chr7:54671279-54670977 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 82, 44 |
| Conread position: | 394-679 |
| Cow position: | chr7:3156267-3156561 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 49 |
| Conread position: | 398-683 |
| Cow position: | chr7:67675907-67676195 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 77, 38 |
| Conread position: | 399-683 |
| Cow position: | chr7:42870951-42871238 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 402-683 |
| Cow position: | chr7:30118728-30118438 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 410-681 |
| Cow position: | chr7:33332385-33332654 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 27 |
| Conread position: | 422-679 |
| Cow position: | chr7:14214536-14214272 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 436-674 |
| Cow position: | chr7:34150151-34150391 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 230 |
| Conread position: | 436-676 |
| Cow position: | chr7:20785130-20784889 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 440-683 |
| Cow position: | chr7:19989876-19990127 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 453-679 |
| Cow position: | chr7:1609779-1609552 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 78, 18 |
| Conread position: | 473-670 |
| Cow position: | chr7:68333829-68334028 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 494-680 |
| Cow position: | chr7:25251054-25251237 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 127, 32 |
| Conread position: | 495-674 |
| Cow position: | chr7:66905628-66905807 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 126, 171 |
| Conread position: | 546-677 |
| Cow position: | chr7:49829667-49829537 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 86, 119 |
Show alignments to all cow chromosomes.