Cow genome map
| Conread name: | mE6-MI-P-E6-ace-g-06-1-UM.s1 |
| Conread position: | 3-166 |
| Cow position: | chr8:61034428-61034257 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 3-328 |
| Cow position: | chr8:38390957-38391291 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-374 |
| Cow position: | chr8:42160824-42160453 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 122 |
| Conread position: | 3-384 |
| Cow position: | chr8:19330326-19330725 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-472 |
| Cow position: | chr8:12449538-12450022 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 180 |
| Conread position: | 3-628 |
| Cow position: | chr8:11969690-11969054 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 3-633 |
| Cow position: | chr8:44663092-44662466 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 204 |
| Conread position: | 3-635 |
| Cow position: | chr8:19051067-19051709 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 3-647 |
| Cow position: | chr8:49215025-49215690 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 406 |
| Conread position: | 3-669 |
| Cow position: | chr8:11762529-11763212 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 135 |
| Conread position: | 3-670 |
| Cow position: | chr8:25408314-25408998 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 205 |
| Conread position: | 3-670 |
| Cow position: | chr8:25522990-25523672 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 113 |
| Conread position: | 3-670 |
| Cow position: | chr8:30487795-30487113 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 377 |
| Conread position: | 3-671 |
| Cow position: | chr8:32318958-32318280 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 3-671 |
| Cow position: | chr8:42484503-42485188 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 409 |
| Conread position: | 3-672 |
| Cow position: | chr8:3856424-3855753 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 233 |
| Conread position: | 3-672 |
| Cow position: | chr8:5016772-5017452 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 208 |
| Conread position: | 3-672 |
| Cow position: | chr8:14928294-14927608 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 406 |
| Conread position: | 3-672 |
| Cow position: | chr8:24915751-24915063 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 406 |
| Conread position: | 3-672 |
| Cow position: | chr8:39195626-39194942 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 404 |
| Conread position: | 3-672 |
| Cow position: | chr8:47661734-47661047 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 196 |
| Conread position: | 3-672 |
| Cow position: | chr8:60060970-60061656 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 54 |
| Conread position: | 3-675 |
| Cow position: | chr8:11832288-11832985 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 412 |
| Conread position: | 3-677 |
| Cow position: | chr8:8911096-8911779 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 378 |
| Conread position: | 3-677 |
| Cow position: | chr8:17311610-17312301 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 320 |
| Conread position: | 3-677 |
| Cow position: | chr8:50288336-50287644 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 3-680 |
| Cow position: | chr8:8517999-8517301 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 283 |
| Conread position: | 3-680 |
| Cow position: | chr8:23771225-23771913 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 398 |
| Conread position: | 3-681 |
| Cow position: | chr8:11802411-11803107 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 103 |
| Conread position: | 3-681 |
| Cow position: | chr8:44243983-44243301 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 345 |
| Conread position: | 3-682 |
| Cow position: | chr8:4686986-4687685 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 407 |
| Conread position: | 3-682 |
| Cow position: | chr8:8556564-8555866 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 393 |
| Conread position: | 3-682 |
| Cow position: | chr8:9735831-9736524 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 296 |
| Conread position: | 3-682 |
| Cow position: | chr8:25776082-25775400 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 122 |
| Conread position: | 3-682 |
| Cow position: | chr8:30891731-30891033 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 401 |
| Conread position: | 3-682 |
| Cow position: | chr8:50930540-50929846 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 3-682 |
| Cow position: | chr8:50994376-50995052 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 137 |
| Conread position: | 3-683 |
| Cow position: | chr8:1319628-1320325 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 400 |
| Conread position: | 3-683 |
| Cow position: | chr8:2170788-2170090 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 247 |
| Conread position: | 3-683 |
| Cow position: | chr8:7161482-7162182 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 406 |
| Conread position: | 3-683 |
| Cow position: | chr8:8315865-8315177 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 232 |
| Conread position: | 3-683 |
| Cow position: | chr8:8401525-8400832 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 228 |
| Conread position: | 3-683 |
| Cow position: | chr8:33588965-33589660 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 402 |
| Conread position: | 3-683 |
| Cow position: | chr8:42419846-42419150 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 146 |
| Conread position: | 7-671 |
| Cow position: | chr8:14591309-14590630 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 398 |
| Conread position: | 47-679 |
| Cow position: | chr8:46050820-46051464 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 54-671 |
| Cow position: | chr8:3785286-3785908 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 384 |
| Conread position: | 63-675 |
| Cow position: | chr8:8308249-8308868 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 337 |
| Conread position: | 68-573 |
| Cow position: | chr8:9964797-9964296 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 68-644 |
| Cow position: | chr8:34108508-34109109 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 78-673 |
| Cow position: | chr8:59262251-59261645 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 329 |
| Conread position: | 91-673 |
| Cow position: | chr8:28878415-28877830 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 188 |
| Conread position: | 104-680 |
| Cow position: | chr8:45692320-45691739 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 65 |
| Conread position: | 109-670 |
| Cow position: | chr8:59141024-59141597 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 290 |
| Conread position: | 116-679 |
| Cow position: | chr8:56883219-56883784 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 88 |
| Conread position: | 149-681 |
| Cow position: | chr8:38585588-38585059 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 75 |
| Conread position: | 153-635 |
| Cow position: | chr8:35212629-35213118 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 205-660 |
| Cow position: | chr8:20136812-20136349 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 73 |
| Conread position: | 224-672 |
| Cow position: | chr8:42579765-42579306 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 50 |
| Conread position: | 306-653 |
| Cow position: | chr8:61080476-61080126 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 340-682 |
| Cow position: | chr8:38391596-38391923 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 135, 53 |
| Conread position: | 349-679 |
| Cow position: | chr8:29007591-29007919 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 373-671 |
| Cow position: | chr8:42159013-42158714 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 393-529 |
| Cow position: | chr8:46952873-46952736 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 44 |
| Conread position: | 393-672 |
| Cow position: | chr8:4785880-4785598 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 82, 44 |
| Conread position: | 393-672 |
| Cow position: | chr8:12801119-12801401 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 81, 44 |
| Conread position: | 401-674 |
| Cow position: | chr8:42468661-42468938 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 36 |
| Conread position: | 402-671 |
| Cow position: | chr8:36635500-36635232 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 402-673 |
| Cow position: | chr8:48787428-48787701 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 402-682 |
| Cow position: | chr8:41644672-41644391 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 35 |
| Conread position: | 404-681 |
| Cow position: | chr8:51666823-51666539 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 405-673 |
| Cow position: | chr8:10742664-10742396 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 28 |
| Conread position: | 436-669 |
| Cow position: | chr8:19865286-19865521 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 38, 230 |
| Conread position: | 436-672 |
| Cow position: | chr8:53430101-53430329 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 39 |
| Conread position: | 436-680 |
| Cow position: | chr8:21584262-21584511 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 39, 233 |
| Conread position: | 454-672 |
| Cow position: | chr8:58185526-58185310 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 17, 21 |
| Conread position: | 464-682 |
| Cow position: | chr8:45450364-45450588 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 11, 208 |
| Conread position: | 478-674 |
| Cow position: | chr8:32647446-32647642 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 480-677 |
| Cow position: | chr8:12450096-12450296 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 49, 189 |
| Conread position: | 486-681 |
| Cow position: | chr8:45449872-45450059 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 146, 26 |
| Conread position: | 495-683 |
| Cow position: | chr8:12801506-12801695 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 139 |
| Conread position: | 507-678 |
| Cow position: | chr8:47886994-47887166 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 129 |
| Conread position: | 510-683 |
| Cow position: | chr8:41944819-41944994 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 156 |
| Conread position: | 530-680 |
| Cow position: | chr8:47673980-47674130 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 91, 136 |
| Conread position: | 573-682 |
| Cow position: | chr8:4305221-4305331 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.