Cow genome map

Conread name: mE6-MI-P-E6-acg-d-10-1-UM.s1

Conread position: 19-215
Cow position: chr15:31086356-31086547 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 94, 66

Conread position: 20-338
Cow position: chr15:312648-312972 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 178

Conread position: 21-338
Cow position: chr15:2670149-2670461 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 95, 137

Conread position: 22-322
Cow position: chr15:1329299-1329001 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 121, 69

Conread position: 22-338
Cow position: chr15:4787652-4787970 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 174

Conread position: 22-338
Cow position: chr15:52464099-52464419 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 171

Conread position: 23-331
Cow position: chr15:39091060-39091362 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 88, 68

Conread position: 23-337
Cow position: chr15:17236738-17237043 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 93, 23

Conread position: 23-338
Cow position: chr15:1877535-1877219 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 202
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 77

Conread position: 23-338
Cow position: chr15:4629098-4629417 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 183

Conread position: 23-338
Cow position: chr15:4815691-4815388 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 59

Conread position: 23-338
Cow position: chr15:6648269-6648581 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 24

Conread position: 23-338
Cow position: chr15:16741205-16740886 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 93, 166

Conread position: 23-338
Cow position: chr15:33700652-33700334 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 62, 71

Conread position: 24-133
Cow position: chr15:50956646-50956536 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 24-165
Cow position: chr15:39407127-39407273 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 24-269
Cow position: chr15:16787498-16787749 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 92, 222

Conread position: 24-295
Cow position: chr15:22095922-22096195 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 180

Conread position: 24-337
Cow position: chr15:13076666-13076350 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 169

Conread position: 24-338
Cow position: chr15:1776308-1775990 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 182

Conread position: 24-338
Cow position: chr15:20458477-20458155 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 88, 256

Conread position: 24-338
Cow position: chr15:21911154-21911482 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 68, 79

Conread position: 24-338
Cow position: chr15:37382442-37382760 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 182

Conread position: 25-189
Cow position: chr15:4730775-4730610 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 77

Conread position: 25-229
Cow position: chr15:30811770-30811563 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 114, 180

Conread position: 25-273
Cow position: chr15:33455507-33455264 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 111

Conread position: 25-325
Cow position: chr15:794198-793898 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 63

Conread position: 25-332
Cow position: chr15:20352664-20352967 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 91, 20

Conread position: 25-338
Cow position: chr15:44613-44301 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 91, 60

Conread position: 25-338
Cow position: chr15:4642345-4642032 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 22

Conread position: 25-338
Cow position: chr15:11628547-11628231 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 91, 66

Conread position: 25-338
Cow position: chr15:33304652-33304957 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 156

Conread position: 25-338
Cow position: chr15:36619009-36619323 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 91, 251

Conread position: 25-338
Cow position: chr15:42533196-42532879 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 70

Conread position: 25-338
Cow position: chr15:42940056-42939740 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 84

Conread position: 25-338
Cow position: chr15:50344589-50344901 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 172

Conread position: 26-203
Cow position: chr15:16967827-16967645 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 26-220
Cow position: chr15:4933530-4933332 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 180

Conread position: 26-223
Cow position: chr15:6945291-6945492 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 180

Conread position: 26-232
Cow position: chr15:41793185-41793395 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 68, 59

Conread position: 26-233
Cow position: chr15:11596237-11596448 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 180

Conread position: 26-261
Cow position: chr15:52208352-52208588 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 176

Conread position: 26-265
Cow position: chr15:17773204-17773448 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 90, 180

Conread position: 26-280
Cow position: chr15:24568908-24569166 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 90, 170

Conread position: 26-299
Cow position: chr15:31768405-31768681 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-303
Cow position: chr15:7512211-7512492 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-312
Cow position: chr15:4895248-4895521 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 91, 27

Conread position: 26-316
Cow position: chr15:1082582-1082282 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 112, 262

Conread position: 26-316
Cow position: chr15:1128846-1129146 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 112, 262

Conread position: 26-320
Cow position: chr15:42727519-42727230 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 81

Conread position: 26-323
Cow position: chr15:7841464-7841163 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-336
Cow position: chr15:6550469-6550783 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-336
Cow position: chr15:17034489-17034796 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 153

Conread position: 26-337
Cow position: chr15:44073590-44073277 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr15:60762-60461 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 109

Conread position: 26-338
Cow position: chr15:363832-364141 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 137

Conread position: 26-338
Cow position: chr15:561871-561558 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr15:2015615-2015303 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 179

Conread position: 26-338
Cow position: chr15:2899113-2899430 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr15:2928403-2928088 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 128

Conread position: 26-338
Cow position: chr15:4214305-4213998 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr15:4218772-4219085 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 177

Conread position: 26-338
Cow position: chr15:4388892-4388576 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 167

Conread position: 26-338
Cow position: chr15:4713052-4712736 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position: chr15:6043744-6043453 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 90, 59

Conread position: 26-338
Cow position: chr15:6152499-6152815 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr15:6163959-6164264 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position: chr15:6488912-6488598 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 164

Conread position: 26-338
Cow position: chr15:6805858-6805541 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 167

Conread position: 26-338
Cow position: chr15:7319710-7319395 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr15:7578306-7577995 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position: chr15:9909957-9910272 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr15:10243265-10242958 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 33, 90

Conread position: 26-338
Cow position: chr15:15343963-15344274 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 131

Conread position: 26-338
Cow position: chr15:17193414-17193734 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 184

Conread position: 26-338
Cow position: chr15:18019242-18019554 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position: chr15:18579867-18579555 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 181

Conread position: 26-338
Cow position: chr15:18661631-18661316 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 169

Conread position: 26-338
Cow position: chr15:19734654-19734970 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr15:20172851-20173160 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 170

Conread position: 26-338
Cow position: chr15:20348123-20348434 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 167

Conread position: 26-338
Cow position: chr15:20413719-20413404 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr15:21532992-21533308 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position: chr15:21607919-21607604 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 166

Conread position: 26-338
Cow position: chr15:21826011-21825694 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 171

Conread position: 26-338
Cow position: chr15:22539694-22540008 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position: chr15:26933187-26932871 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 178

Conread position: 26-338
Cow position: chr15:27747373-27747691 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 172

Conread position: 26-338
Cow position: chr15:35405117-35404804 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 181

Conread position: 26-338
Cow position: chr15:35750152-35750467 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 153

Conread position: 26-338
Cow position: chr15:36622525-36622833 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 105

Conread position: 26-338
Cow position: chr15:41360147-41359832 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 225
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 86, 54

Conread position: 26-338
Cow position: chr15:47201430-47201740 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 169

Conread position: 26-338
Cow position: chr15:52867774-52867465 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 74

Conread position: 27-170
Cow position: chr15:50084955-50085101 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 27-300
Cow position: chr15:47842231-47841955 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 244

Conread position: 27-333
Cow position: chr15:8754005-8753695 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 83

Conread position: 27-337
Cow position: chr15:2080475-2080161 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 53

Conread position: 27-338
Cow position: chr15:442645-442958 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 179

Conread position: 27-338
Cow position: chr15:4925294-4924987 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 107

Conread position: 27-338
Cow position: chr15:7941561-7941249 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 179

Conread position: 27-338
Cow position: chr15:12417570-12417881 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 148

Conread position: 27-338
Cow position: chr15:18214706-18214399 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 178

Conread position: 27-338
Cow position: chr15:31357455-31357769 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 78

Conread position: 28-204
Cow position: chr15:10839110-10838928 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 28-232
Cow position: chr15:6537720-6537921 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 145

Conread position: 28-338
Cow position: chr15:7847663-7847971 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 88, 153

Conread position: 28-338
Cow position: chr15:25069351-25069665 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 178

Conread position: 28-338
Cow position: chr15:32065148-32065460 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 18

Conread position: 29-232
Cow position: chr15:33335606-33335399 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 177

Conread position: 29-232
Cow position: chr15:44576540-44576333 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 87, 177

Conread position: 29-259
Cow position: chr15:8576291-8576056 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 58

Conread position: 29-259
Cow position: chr15:9620259-9620494 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 87, 177

Conread position: 29-268
Cow position: chr15:37744195-37743958 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 56

Conread position: 29-284
Cow position: chr15:20647306-20647047 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 177

Conread position: 29-286
Cow position: chr15:6158326-6158065 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 87, 177

Conread position: 29-300
Cow position: chr15:5242912-5243180 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 110, 165

Conread position: 29-301
Cow position: chr15:20404541-20404816 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 87, 177

Conread position: 29-321
Cow position: chr15:35881-35591 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 173

Conread position: 29-321
Cow position: chr15:7271481-7271184 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 163

Conread position: 29-331
Cow position: chr15:4821929-4822233 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-337
Cow position: chr15:18264619-18264933 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 251

Conread position: 29-337
Cow position: chr15:40344109-40344417 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 152

Conread position: 29-338
Cow position: chr15:67424-67730 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 167

Conread position: 29-338
Cow position: chr15:608975-609290 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 253

Conread position: 29-338
Cow position: chr15:2644206-2644517 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 100

Conread position: 29-338
Cow position: chr15:3007697-3008009 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 58

Conread position: 29-338
Cow position: chr15:4122925-4122613 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr15:4139766-4140080 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr15:5198097-5197784 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 167

Conread position: 29-338
Cow position: chr15:5498199-5497888 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 177

Conread position: 29-338
Cow position: chr15:5640449-5640762 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 177

Conread position: 29-338
Cow position: chr15:6564034-6563722 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 87, 176

Conread position: 29-338
Cow position: chr15:6616940-6616627 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr15:7267743-7267430 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr15:11574875-11575182 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 175

Conread position: 29-338
Cow position: chr15:12439868-12439576 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 208, 54

Conread position: 29-338
Cow position: chr15:12859283-12858970 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 177

Conread position: 29-338
Cow position: chr15:13683476-13683172 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 113

Conread position: 29-338
Cow position: chr15:14578278-14578574 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 87, 52

Conread position: 29-338
Cow position: chr15:21152679-21152992 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr15:21637414-21637100 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr15:25133104-25132786 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 255

Conread position: 29-338
Cow position: chr15:25164962-25165275 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 164

Conread position: 29-338
Cow position: chr15:26591205-26591517 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 167

Conread position: 29-338
Cow position: chr15:29884180-29884482 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 70

Conread position: 29-338
Cow position: chr15:32714842-32714532 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 70

Conread position: 29-338
Cow position: chr15:33753140-33753451 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr15:36329318-36329631 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 55

Conread position: 29-338
Cow position: chr15:36355927-36356240 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 177

Conread position: 29-338
Cow position: chr15:36671303-36671005 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 29-338
Cow position: chr15:36940241-36940553 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr15:45944553-45944867 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 178

Conread position: 29-338
Cow position: chr15:48556861-48556548 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 159

Conread position: 29-338
Cow position: chr15:50151841-50151529 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr15:50308330-50308636 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 80, 180

Conread position: 30-217
Cow position: chr15:2796484-2796297 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 109, 77

Conread position: 30-220
Cow position: chr15:12991-13186 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 177

Conread position: 30-233
Cow position: chr15:36146300-36146092 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 177

Conread position: 30-263
Cow position: chr15:8937550-8937313 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 86, 15

Conread position: 30-265
Cow position: chr15:20944513-20944272 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 17, 177

Conread position: 30-289
Cow position: chr15:45211154-45210890 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 17, 177

Conread position: 30-299
Cow position: chr15:41029177-41029451 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 17, 177

Conread position: 30-323
Cow position: chr15:50142401-50142103 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position: chr15:29167-29479 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 176

Conread position: 30-338
Cow position: chr15:481720-481413 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 172

Conread position: 30-338
Cow position: chr15:1785907-1785595 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 59

Conread position: 30-338
Cow position: chr15:2533873-2533560 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position: chr15:2590538-2590233 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 55

Conread position: 30-338
Cow position: chr15:4953462-4953156 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 161

Conread position: 30-338
Cow position: chr15:16784462-16784155 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 17, 152

Conread position: 30-338
Cow position: chr15:16801416-16801103 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position: chr15:23666352-23666665 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position: chr15:25463386-25463695 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 55

Conread position: 30-338
Cow position: chr15:30045549-30045227 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 59

Conread position: 30-338
Cow position: chr15:42418802-42419117 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 68, 143

Conread position: 31-338
Cow position: chr15:2560560-2560248 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 176

Conread position: 31-338
Cow position: chr15:4689173-4688862 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 175

Conread position: 31-338
Cow position: chr15:6464206-6463902 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 61

Conread position: 31-338
Cow position: chr15:24796982-24796695 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 85, 14

Conread position: 33-314
Cow position: chr15:34140845-34141126 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 83, 163

Conread position: 33-338
Cow position: chr15:3721002-3721304 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 50, 56

Conread position: 33-338
Cow position: chr15:10736703-10736397 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 83, 60

Conread position: 33-338
Cow position: chr15:12442663-12442354 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 173

Conread position: 33-338
Cow position: chr15:28071298-28071603 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 202
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 80, 173

Conread position: 33-338
Cow position: chr15:45292456-45292148 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 173

Conread position: 34-338
Cow position: chr15:4829471-4829165 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 82, 152

Conread position: 34-338
Cow position: chr15:26388832-26389134 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 171

Conread position: 34-338
Cow position: chr15:32701601-32701902 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 82, 148

Conread position: 35-310
Cow position: chr15:6367354-6367630 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 50

Conread position: 35-338
Cow position: chr15:36423479-36423785 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 172

Conread position: 37-338
Cow position: chr15:6331249-6330950 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 12

Conread position: 45-228
Cow position: chr15:53357086-53357267 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 141

Conread position: 45-272
Cow position: chr15:29811619-29811850 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 67, 161

Conread position: 45-324
Cow position: chr15:35739357-35739083 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 71, 151

Conread position: 45-338
Cow position: chr15:3257389-3257676 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 71, 101

Conread position: 45-338
Cow position: chr15:42597126-42597423 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 42

Conread position: 46-337
Cow position: chr15:4077008-4077299 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 160

Conread position: 46-338
Cow position: chr15:31269749-31270042 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 76

Conread position: 47-192
Cow position: chr15:15740043-15739893 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 47-338
Cow position: chr15:33527445-33527730 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 53-338
Cow position: chr15:21939905-21940194 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 153

Conread position: 55-338
Cow position: chr15:25554255-25553971 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 116

Conread position: 59-282
Cow position: chr15:4874765-4874986 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 57, 70

Conread position: 59-338
Cow position: chr15:34064065-34063785 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 43

Conread position: 61-213
Cow position: chr15:33975576-33975419 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 103-338
Cow position: chr15:21831006-21830770 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 13, 103

Conread position: 103-338
Cow position: chr15:26077792-26077563 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 102

Show alignments to all cow chromosomes.