Cow genome map

Conread name: mE6-MI-P-E6-acg-d-10-1-UM.s1

Conread position: 22-247
Cow position: chr16:5352400-5352625 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 217, 179

Conread position: 22-338
Cow position: chr16:29158412-29158104 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 21

Conread position: 23-174
Cow position: chr16:46223711-46223867 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 23-183
Cow position: chr16:14722462-14722626 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 93, 146

Conread position: 23-219
Cow position: chr16:4712172-4711967 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 92, 188

Conread position: 23-233
Cow position: chr16:39457180-39456975 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 32

Conread position: 23-286
Cow position: chr16:2224150-2224419 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 57

Conread position: 23-333
Cow position: chr16:45534262-45533948 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 183

Conread position: 23-338
Cow position: chr16:5833597-5833282 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 90, 43

Conread position: 23-338
Cow position: chr16:7457186-7457501 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 179

Conread position: 23-338
Cow position: chr16:8481829-8482139 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 121

Conread position: 23-338
Cow position: chr16:26500446-26500144 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 123

Conread position: 23-338
Cow position: chr16:41804657-41804965 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 20

Conread position: 23-338
Cow position: chr16:42074098-42074418 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 258

Conread position: 24-194
Cow position: chr16:7010126-7009951 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 24-206
Cow position: chr16:24876165-24876347 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 67

Conread position: 24-224
Cow position: chr16:16237183-16237389 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 92, 75

Conread position: 24-281
Cow position: chr16:48341410-48341669 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 92, 143

Conread position: 24-297
Cow position: chr16:8871644-8871917 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 92, 161

Conread position: 24-325
Cow position: chr16:13422125-13422428 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 145

Conread position: 24-332
Cow position: chr16:28022277-28022570 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 21

Conread position: 24-338
Cow position: chr16:30052744-30052430 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 206
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 169

Conread position: 25-185
Cow position: chr16:18205026-18204861 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 25-219
Cow position: chr16:39416215-39416410 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 25-336
Cow position: chr16:53612599-53612286 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 58, 62

Conread position: 25-338
Cow position: chr16:23810318-23810002 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 164

Conread position: 25-338
Cow position: chr16:25964701-25964392 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 91, 157

Conread position: 25-338
Cow position: chr16:45609207-45608896 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 171

Conread position: 25-338
Cow position: chr16:45704000-45704313 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 63

Conread position: 25-338
Cow position: chr16:50712642-50712958 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 23

Conread position: 26-203
Cow position: chr16:42254521-42254698 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 90, 116

Conread position: 26-214
Cow position: chr16:7043135-7043327 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 90, 105

Conread position: 26-214
Cow position: chr16:19409558-19409751 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 26-229
Cow position: chr16:8367935-8368136 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 100, 62

Conread position: 26-233
Cow position: chr16:6389859-6390070 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 90, 180

Conread position: 26-238
Cow position: chr16:2963060-2963276 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 94, 170

Conread position: 26-263
Cow position: chr16:15369788-15369551 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 90, 175

Conread position: 26-271
Cow position: chr16:23403610-23403361 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 90, 58

Conread position: 26-272
Cow position: chr16:42745687-42745926 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 155

Conread position: 26-273
Cow position: chr16:51641044-51640794 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 68, 59

Conread position: 26-295
Cow position: chr16:44676151-44675877 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 165

Conread position: 26-296
Cow position: chr16:5350711-5350985 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-315
Cow position: chr16:237274-236987 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 90, 136

Conread position: 26-316
Cow position: chr16:4079165-4079454 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 59

Conread position: 26-322
Cow position: chr16:19062632-19062330 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 91, 74

Conread position: 26-331
Cow position: chr16:47017957-47018261 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 167

Conread position: 26-336
Cow position: chr16:24445249-24444924 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 62, 182

Conread position: 26-337
Cow position: chr16:600217-599907 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 172

Conread position: 26-337
Cow position: chr16:1734536-1734220 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 254

Conread position: 26-337
Cow position: chr16:2724427-2724742 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 166

Conread position: 26-337
Cow position: chr16:49515984-49516302 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 55, 256

Conread position: 26-338
Cow position: chr16:41331-41015 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 180

Conread position: 26-338
Cow position: chr16:840067-839762 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 48

Conread position: 26-338
Cow position: chr16:1563591-1563907 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:1957929-1958241 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 181

Conread position: 26-338
Cow position: chr16:2408096-2408414 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 58

Conread position: 26-338
Cow position: chr16:2480358-2480668 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 148

Conread position: 26-338
Cow position: chr16:3148242-3148555 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 171

Conread position: 26-338
Cow position: chr16:3769211-3769530 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 183

Conread position: 26-338
Cow position: chr16:4756807-4756506 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 86

Conread position: 26-338
Cow position: chr16:4972730-4973044 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 107

Conread position: 26-338
Cow position: chr16:5435622-5435306 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position: chr16:7467405-7467094 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 153

Conread position: 26-338
Cow position: chr16:8813308-8813622 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:10441035-10440720 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 19

Conread position: 26-338
Cow position: chr16:14100645-14100333 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 58

Conread position: 26-338
Cow position: chr16:14351887-14352201 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:15485584-15485272 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 59

Conread position: 26-338
Cow position: chr16:15979581-15979897 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:18694169-18694492 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 90, 17

Conread position: 26-338
Cow position: chr16:21018356-21018040 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:23249158-23249474 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:23533203-23533518 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 143

Conread position: 26-338
Cow position: chr16:24240603-24240919 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 167

Conread position: 26-338
Cow position: chr16:25344776-25344459 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 170

Conread position: 26-338
Cow position: chr16:25444673-25444358 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:25454664-25454979 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 63

Conread position: 26-338
Cow position: chr16:26666501-26666185 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:27730584-27730900 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:28206314-28206630 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:28468326-28468642 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 166

Conread position: 26-338
Cow position: chr16:29050442-29050125 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 170

Conread position: 26-338
Cow position: chr16:37445907-37446217 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 160

Conread position: 26-338
Cow position: chr16:37478064-37478379 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 166

Conread position: 26-338
Cow position: chr16:39033548-39033852 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:40293373-40293689 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 171

Conread position: 26-338
Cow position: chr16:41515931-41515613 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 182

Conread position: 26-338
Cow position: chr16:41834663-41834362 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 177

Conread position: 26-338
Cow position: chr16:43894464-43894781 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 171

Conread position: 26-338
Cow position: chr16:44049127-44049443 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 164

Conread position: 26-338
Cow position: chr16:46101822-46102136 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:46555219-46554903 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 167

Conread position: 26-338
Cow position: chr16:48411432-48411116 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:52527028-52526714 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr16:56913441-56913753 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 27-193
Cow position: chr16:44972951-44973122 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 89, 0

Conread position: 27-232
Cow position: chr16:23059291-23059500 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 89, 120

Conread position: 27-235
Cow position: chr16:49096761-49096548 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 180

Conread position: 27-322
Cow position: chr16:7541278-7540980 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 175

Conread position: 27-338
Cow position: chr16:5895229-5894926 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 109

Conread position: 27-338
Cow position: chr16:11633047-11633363 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 167

Conread position: 27-338
Cow position: chr16:25157610-25157913 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 87, 143

Conread position: 27-338
Cow position: chr16:25169023-25168718 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 30

Conread position: 27-338
Cow position: chr16:31425855-31425530 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 89, 248

Conread position: 27-338
Cow position: chr16:49142275-49142592 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 171

Conread position: 27-338
Cow position: chr16:51087579-51087265 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 179

Conread position: 27-338
Cow position: chr16:55682296-55681994 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 58

Conread position: 28-304
Cow position: chr16:23563243-23562969 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 107

Conread position: 28-309
Cow position: chr16:24147447-24147167 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 88, 172

Conread position: 28-338
Cow position: chr16:13721794-13722108 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 178

Conread position: 28-338
Cow position: chr16:14029366-14029660 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 88, 122

Conread position: 28-338
Cow position: chr16:24209604-24209917 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 15

Conread position: 28-338
Cow position: chr16:27593029-27593341 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 55

Conread position: 28-338
Cow position: chr16:47773060-47772741 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 179

Conread position: 29-201
Cow position: chr16:14757980-14757805 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 62

Conread position: 29-218
Cow position: chr16:19778143-19778337 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 53, 165

Conread position: 29-232
Cow position: chr16:35342707-35342914 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 87, 177

Conread position: 29-232
Cow position: chr16:44450737-44450529 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 87, 0

Conread position: 29-233
Cow position: chr16:20502829-20502621 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 87, 177

Conread position: 29-245
Cow position: chr16:16942510-16942289 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 87, 177

Conread position: 29-247
Cow position: chr16:13989077-13988863 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 84

Conread position: 29-265
Cow position: chr16:32118373-32118132 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 177

Conread position: 29-268
Cow position: chr16:26658759-26658515 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 87, 177

Conread position: 29-272
Cow position: chr16:23772881-23773129 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 177

Conread position: 29-317
Cow position: chr16:29539017-29539305 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 173

Conread position: 29-321
Cow position: chr16:22320492-22320773 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 180

Conread position: 29-336
Cow position: chr16:7155394-7155087 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 150

Conread position: 29-336
Cow position: chr16:49219159-49219466 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 60

Conread position: 29-338
Cow position: chr16:193144-193454 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 139

Conread position: 29-338
Cow position: chr16:2960473-2960160 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:4426884-4426572 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 167

Conread position: 29-338
Cow position: chr16:5525305-5525623 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:5665895-5665582 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:6677515-6677202 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:7303550-7303237 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:7385559-7385246 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:10372642-10372953 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 178

Conread position: 29-338
Cow position: chr16:12160489-12160799 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 167

Conread position: 29-338
Cow position: chr16:12651714-12651409 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 55

Conread position: 29-338
Cow position: chr16:14040219-14039906 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:15312075-15311764 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:16095992-16095680 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 59

Conread position: 29-338
Cow position: chr16:16149954-16150267 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:18212401-18212714 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:18650790-18651101 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 55

Conread position: 29-338
Cow position: chr16:18975662-18975349 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:19081840-19081533 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 96

Conread position: 29-338
Cow position: chr16:20204791-20204485 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 14

Conread position: 29-338
Cow position: chr16:22798910-22799223 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:24407706-24407391 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 58

Conread position: 29-338
Cow position: chr16:24615281-24615584 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 87, 157

Conread position: 29-338
Cow position: chr16:26627546-26627233 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:26990146-26990459 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:28193507-28193819 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 133

Conread position: 29-338
Cow position: chr16:41034094-41033780 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 178

Conread position: 29-338
Cow position: chr16:42211290-42210977 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:45465127-45465436 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 55

Conread position: 29-338
Cow position: chr16:47404174-47403863 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:49126915-49127209 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 23

Conread position: 29-338
Cow position: chr16:49780156-49780469 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr16:50190324-50190633 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 160

Conread position: 29-338
Cow position: chr16:54179570-54179883 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 177

Conread position: 30-174
Cow position: chr16:24229034-24228885 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 30-203
Cow position: chr16:3011907-3011733 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 53

Conread position: 30-213
Cow position: chr16:42079563-42079744 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 85, 135

Conread position: 30-214
Cow position: chr16:52952446-52952635 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 55

Conread position: 30-233
Cow position: chr16:47247866-47247658 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 177

Conread position: 30-272
Cow position: chr16:5844706-5844453 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 66, 157

Conread position: 30-333
Cow position: chr16:2232933-2233240 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 59

Conread position: 30-338
Cow position: chr16:5488665-5488352 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 167

Conread position: 30-338
Cow position: chr16:12485506-12485819 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position: chr16:15187857-15187549 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 166

Conread position: 30-338
Cow position: chr16:15904427-15904723 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 82, 172

Conread position: 30-338
Cow position: chr16:20278634-20278321 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position: chr16:24987710-24988023 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position: chr16:25075387-25075074 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position: chr16:25880110-25879797 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position: chr16:25935536-25935227 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 55

Conread position: 30-338
Cow position: chr16:27013190-27012883 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 176

Conread position: 30-338
Cow position: chr16:37925191-37925504 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 179

Conread position: 30-338
Cow position: chr16:40879386-40879073 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 31-338
Cow position: chr16:41576036-41575735 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 16, 176

Conread position: 32-187
Cow position: chr16:3027223-3027063 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 32-187
Cow position: chr16:3030481-3030641 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 32-204
Cow position: chr16:39645776-39645597 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 32-338
Cow position: chr16:18745249-18745549 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 94

Conread position: 32-338
Cow position: chr16:52856055-52856354 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 53

Conread position: 33-316
Cow position: chr16:44256346-44256628 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 207
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 61, 51

Conread position: 33-338
Cow position: chr16:15349372-15349666 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 48

Conread position: 33-338
Cow position: chr16:39616012-39615705 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 83, 173

Conread position: 33-338
Cow position: chr16:51400771-51401066 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 101

Conread position: 33-338
Cow position: chr16:54231558-54231861 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 163

Conread position: 34-308
Cow position: chr16:45754842-45755108 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 78, 108

Conread position: 34-327
Cow position: chr16:16267120-16267423 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 228
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 78, 90

Conread position: 34-338
Cow position: chr16:25893297-25892989 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 209
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 82, 113

Conread position: 35-338
Cow position: chr16:25174027-25173727 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 81, 133

Conread position: 42-338
Cow position: chr16:25088398-25088090 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 172

Conread position: 45-227
Cow position: chr16:48495141-48495326 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 71, 61

Conread position: 45-338
Cow position: chr16:23711509-23711806 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 161

Conread position: 45-338
Cow position: chr16:37053816-37053519 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 161

Conread position: 54-338
Cow position: chr16:12535185-12535467 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 142

Conread position: 59-178
Cow position: chr16:49170117-49170236 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 83

Conread position: 59-338
Cow position: chr16:12244281-12244560 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 127

Conread position: 60-338
Cow position: chr16:55591240-55591499 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 56, 71

Conread position: 62-229
Cow position: chr16:16543213-16543042 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 76-338
Cow position: chr16:658697-658441 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 116

Conread position: 111-337
Cow position: chr16:29036584-29036359 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 61

Show alignments to all cow chromosomes.