Cow genome map

Conread name: mE6-MI-P-E6-acg-d-10-1-UM.s1

Conread position: 17-338
Cow position:
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 190

Conread position: 23-337
Cow position:
Alignm length: 319
Alignm identity: 225
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 122, 172

Conread position: 23-338
Cow position:
Alignm length: 322
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 173

Conread position: 23-338
Cow position:
Alignm length: 318
Alignm identity: 220
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 300, 65

Conread position: 23-338
Cow position:
Alignm length: 321
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 182

Conread position: 24-299
Cow position:
Alignm length: 280
Alignm identity: 189
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 72, 59

Conread position: 24-338
Cow position:
Alignm length: 316
Alignm identity: 223
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 210, 99

Conread position: 24-338
Cow position:
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 24-338
Cow position:
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 181

Conread position: 25-176
Cow position:
Alignm length: 153
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 123

Conread position: 25-281
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 91, 22

Conread position: 25-329
Cow position:
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 102

Conread position: 25-338
Cow position:
Alignm length: 316
Alignm identity: 223
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 91, 112

Conread position: 25-338
Cow position:
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 60

Conread position: 25-338
Cow position:
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 168

Conread position: 25-338
Cow position:
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 51

Conread position: 26-163
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 58

Conread position: 26-173
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 26-189
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 26-197
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 26-231
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 90, 180

Conread position: 26-253
Cow position:
Alignm length: 234
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 167

Conread position: 26-259
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 65

Conread position: 26-261
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 170

Conread position: 26-305
Cow position:
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-314
Cow position:
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-321
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 86, 168

Conread position: 26-322
Cow position:
Alignm length: 302
Alignm identity: 217
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 66, 74

Conread position: 26-336
Cow position:
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 71

Conread position: 26-338
Cow position:
Alignm length: 318
Alignm identity: 220
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 90, 38

Conread position: 26-338
Cow position:
Alignm length: 326
Alignm identity: 225
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 112, 180

Conread position: 26-338
Cow position:
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 116

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position:
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 148

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 63

Conread position: 26-338
Cow position:
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 59

Conread position: 26-338
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 89, 144

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 59

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 170

Conread position: 26-338
Cow position:
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 257

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 63

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 62

Conread position: 26-338
Cow position:
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 182

Conread position: 26-338
Cow position:
Alignm length: 319
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 181

Conread position: 27-197
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 56

Conread position: 27-315
Cow position:
Alignm length: 295
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 89, 169

Conread position: 27-338
Cow position:
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 180

Conread position: 27-338
Cow position:
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 167

Conread position: 27-338
Cow position:
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 37

Conread position: 27-338
Cow position:
Alignm length: 314
Alignm identity: 214
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 89, 34

Conread position: 28-222
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 88, 169

Conread position: 28-338
Cow position:
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 56

Conread position: 28-338
Cow position:
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 178

Conread position: 28-338
Cow position:
Alignm length: 314
Alignm identity: 226
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 96

Conread position: 28-338
Cow position:
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 78

Conread position: 28-338
Cow position:
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 114

Conread position: 29-272
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 87, 177

Conread position: 29-287
Cow position:
Alignm length: 268
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 90

Conread position: 29-304
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 85, 173

Conread position: 29-323
Cow position:
Alignm length: 301
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-337
Cow position:
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 106

Conread position: 29-338
Cow position:
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position:
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position:
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 168

Conread position: 29-338
Cow position:
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position:
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 174

Conread position: 29-338
Cow position:
Alignm length: 315
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 177

Conread position: 29-338
Cow position:
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position:
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 55

Conread position: 29-338
Cow position:
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 177

Conread position: 29-338
Cow position:
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position:
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position:
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position:
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 52

Conread position: 29-338
Cow position:
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 144

Conread position: 29-338
Cow position:
Alignm length: 334
Alignm identity: 228
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 269

Conread position: 29-338
Cow position:
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 58

Conread position: 29-338
Cow position:
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position:
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 177

Conread position: 29-338
Cow position:
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 177

Conread position: 29-338
Cow position:
Alignm length: 318
Alignm identity: 211
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 113, 253

Conread position: 30-230
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 177

Conread position: 30-230
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 18, 57

Conread position: 30-233
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 17, 177

Conread position: 30-233
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 17, 177

Conread position: 30-293
Cow position:
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 149

Conread position: 30-309
Cow position:
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-332
Cow position:
Alignm length: 312
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 69, 59

Conread position: 30-332
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position:
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 118

Conread position: 30-338
Cow position:
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position:
Alignm length: 317
Alignm identity: 228
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 17, 58

Conread position: 30-338
Cow position:
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 176

Conread position: 30-338
Cow position:
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 176

Conread position: 30-338
Cow position:
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 166

Conread position: 30-338
Cow position:
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 142

Conread position: 31-338
Cow position:
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 15

Conread position: 31-338
Cow position:
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 177

Conread position: 31-338
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 72

Conread position: 32-325
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 79, 172

Conread position: 33-338
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 163

Conread position: 33-338
Cow position:
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 132

Conread position: 33-338
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 159

Conread position: 33-338
Cow position:
Alignm length: 312
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 173

Conread position: 34-338
Cow position:
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 147

Conread position: 34-338
Cow position:
Alignm length: 311
Alignm identity: 206
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 142

Conread position: 35-338
Cow position:
Alignm length: 310
Alignm identity: 208
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 66

Conread position: 37-338
Cow position:
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 48

Conread position: 41-338
Cow position:
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 164

Conread position: 42-338
Cow position:
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 104

Conread position: 45-338
Cow position:
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 151

Conread position: 47-250
Cow position:
Alignm length: 211
Alignm identity: 161
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 67, 160

Conread position: 52-320
Cow position:
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 154

Conread position: 61-336
Cow position:
Alignm length: 277
Alignm identity: 184
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 55, 38

Conread position: 61-338
Cow position:
Alignm length: 279
Alignm identity: 196
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 55, 85

Conread position: 71-338
Cow position:
Alignm length: 274
Alignm identity: 207
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 53, 18

Conread position: 103-268
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 89

Show alignments to all cow chromosomes.