Cow genome map
Conread name: | mE6-MI-P-E6-acg-d-10-1-UM.s1 |
Conread position: | 20-265 |
Cow position: | chr27:9090124-9089881 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 178 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 96, 71 |
Conread position: | 23-264 |
Cow position: | chr27:11256203-11256446 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 183 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 78, 68 |
Conread position: | 23-338 |
Cow position: | chr27:2682003-2681687 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 183 |
Conread position: | 23-338 |
Cow position: | chr27:4982855-4982536 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 173 |
Conread position: | 23-338 |
Cow position: | chr27:5914411-5914097 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 79 |
Conread position: | 23-338 |
Cow position: | chr27:5925746-5925437 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 228 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 20, 151 |
Conread position: | 23-338 |
Cow position: | chr27:8291325-8291007 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 184 |
Conread position: | 23-338 |
Cow position: | chr27:8427333-8427021 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 84 |
Conread position: | 23-338 |
Cow position: | chr27:15870536-15870846 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 160 |
Conread position: | 23-338 |
Cow position: | chr27:27930679-27930372 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 120 |
Conread position: | 24-193 |
Cow position: | chr27:8262319-8262146 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 124 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 24-338 |
Cow position: | chr27:21392492-21392176 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 163 |
Conread position: | 24-338 |
Cow position: | chr27:30036354-30036033 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 62 |
Conread position: | 25-205 |
Cow position: | chr27:2936302-2936122 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 135 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 91, 63 |
Conread position: | 25-254 |
Cow position: | chr27:27054011-27054248 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 166 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 52, 171 |
Conread position: | 25-263 |
Cow position: | chr27:30677605-30677841 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 172 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 87, 117 |
Conread position: | 25-318 |
Cow position: | chr27:4818893-4818599 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 192 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 121, 166 |
Conread position: | 25-338 |
Cow position: | chr27:13353787-13353470 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 122 |
Conread position: | 25-338 |
Cow position: | chr27:15866822-15867131 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 174 |
Conread position: | 25-338 |
Cow position: | chr27:21451924-21451608 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 181 |
Conread position: | 25-338 |
Cow position: | chr27:30306788-30307105 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 168 |
Conread position: | 26-188 |
Cow position: | chr27:13409475-13409307 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 134 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 26-206 |
Cow position: | chr27:816283-816469 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 137 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 26-209 |
Cow position: | chr27:29811784-29811596 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 137 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 90, 162 |
Conread position: | 26-221 |
Cow position: | chr27:4834624-4834427 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 143 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 90, 153 |
Conread position: | 26-265 |
Cow position: | chr27:16331999-16332242 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 186 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 90, 180 |
Conread position: | 26-268 |
Cow position: | chr27:15100121-15099875 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 182 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 90, 57 |
Conread position: | 26-292 |
Cow position: | chr27:12239547-12239278 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 179 |
Conread position: | 26-336 |
Cow position: | chr27:11481411-11481097 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 180 |
Conread position: | 26-337 |
Cow position: | chr27:14380783-14380469 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 179 |
Conread position: | 26-338 |
Cow position: | chr27:344450-344759 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 180 |
Conread position: | 26-338 |
Cow position: | chr27:1189142-1188830 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 167 |
Conread position: | 26-338 |
Cow position: | chr27:2001325-2001010 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 180 |
Conread position: | 26-338 |
Cow position: | chr27:2331983-2331667 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 63 |
Conread position: | 26-338 |
Cow position: | chr27:3990320-3990636 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 170 |
Conread position: | 26-338 |
Cow position: | chr27:4331259-4331576 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 59 |
Conread position: | 26-338 |
Cow position: | chr27:6523800-6524114 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 216 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 109, 179 |
Conread position: | 26-338 |
Cow position: | chr27:8201415-8201102 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 170 |
Conread position: | 26-338 |
Cow position: | chr27:9262797-9263113 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 214 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 87, 167 |
Conread position: | 26-338 |
Cow position: | chr27:10383911-10383612 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 229 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 90, 121 |
Conread position: | 26-338 |
Cow position: | chr27:11434647-11434339 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 134 |
Conread position: | 26-338 |
Cow position: | chr27:13901604-13901288 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 170 |
Conread position: | 26-338 |
Cow position: | chr27:15033411-15033727 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 170 |
Conread position: | 26-338 |
Cow position: | chr27:15633863-15634178 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 156 |
Conread position: | 26-338 |
Cow position: | chr27:19423898-19424213 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 24 |
Conread position: | 26-338 |
Cow position: | chr27:19523230-19523544 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 24 |
Conread position: | 26-338 |
Cow position: | chr27:24239650-24239950 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 213 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 87, 163 |
Conread position: | 26-338 |
Cow position: | chr27:24295780-24296105 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 263 |
Conread position: | 26-338 |
Cow position: | chr27:26330412-26330096 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 170 |
Conread position: | 26-338 |
Cow position: | chr27:27291873-27291553 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 63 |
Conread position: | 27-161 |
Cow position: | chr27:13273045-13272907 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 112 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 89, 16 |
Conread position: | 27-216 |
Cow position: | chr27:28984245-28984055 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 143 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 16, 81 |
Conread position: | 27-247 |
Cow position: | chr27:11490101-11489875 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 157 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 27-338 |
Cow position: | chr27:3653220-3653536 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 180 |
Conread position: | 27-338 |
Cow position: | chr27:27729012-27729323 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 136 |
Conread position: | 28-306 |
Cow position: | chr27:4389466-4389199 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 201 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 87, 113 |
Conread position: | 28-338 |
Cow position: | chr27:15406100-15405792 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 222 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 19, 64 |
Conread position: | 29-214 |
Cow position: | chr27:19300089-19300278 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 134 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 87, 177 |
Conread position: | 29-285 |
Cow position: | chr27:3649958-3649698 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 191 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 87, 177 |
Conread position: | 29-315 |
Cow position: | chr27:8959539-8959829 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 177 |
Conread position: | 29-332 |
Cow position: | chr27:5983553-5983860 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 167 |
Conread position: | 29-338 |
Cow position: | chr27:165443-165755 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 62 |
Conread position: | 29-338 |
Cow position: | chr27:1521151-1520844 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 152 |
Conread position: | 29-338 |
Cow position: | chr27:10579420-10579111 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 52 |
Conread position: | 29-338 |
Cow position: | chr27:13317032-13316727 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 70 |
Conread position: | 29-338 |
Cow position: | chr27:16030920-16031233 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 62 |
Conread position: | 29-338 |
Cow position: | chr27:22797182-22797493 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 58 |
Conread position: | 29-338 |
Cow position: | chr27:26785294-26784986 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 177 |
Conread position: | 30-193 |
Cow position: | chr27:10324453-10324618 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 129 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 30-193 |
Cow position: | chr27:13422687-13422856 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 123 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 30-338 |
Cow position: | chr27:3232058-3232370 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 166 |
Conread position: | 30-338 |
Cow position: | chr27:9333143-9332842 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 166 |
Conread position: | 30-338 |
Cow position: | chr27:9970648-9970335 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 177 |
Conread position: | 30-338 |
Cow position: | chr27:12006625-12006312 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 177 |
Conread position: | 30-338 |
Cow position: | chr27:14297683-14297371 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 176 |
Conread position: | 30-338 |
Cow position: | chr27:20810892-20810585 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 166 |
Conread position: | 30-338 |
Cow position: | chr27:29035905-29036216 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 177 |
Conread position: | 31-338 |
Cow position: | chr27:17565167-17565470 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 201 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 200, 19 |
Conread position: | 31-338 |
Cow position: | chr27:20765212-20764911 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 220 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 205, 44 |
Conread position: | 32-338 |
Cow position: | chr27:2557518-2557827 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 165 |
Conread position: | 34-320 |
Cow position: | chr27:13182813-13183090 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 216 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 82, 130 |
Conread position: | 34-338 |
Cow position: | chr27:25784289-25784589 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 204 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 20, 175 |
Conread position: | 35-338 |
Cow position: | chr27:1501984-1501689 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 215 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 81, 170 |
Conread position: | 36-338 |
Cow position: | chr27:18954513-18954207 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 199 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 66, 61 |
Conread position: | 41-330 |
Cow position: | chr27:16787833-16788124 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 165 |
Conread position: | 45-215 |
Cow position: | chr27:491544-491366 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 127 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 45-338 |
Cow position: | chr27:22647171-22647468 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 161 |
Show alignments to all cow chromosomes.