Cow genome map
| Conread name: | mE6-MI-P-E6-acg-d-10-1-UM.s1 |
| Conread position: | 22-321 |
| Cow position: | chr28:12429734-12429433 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 94, 63 |
| Conread position: | 23-214 |
| Cow position: | chr28:20964347-20964541 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 89, 146 |
| Conread position: | 23-308 |
| Cow position: | chr28:29473520-29473231 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 64, 78 |
| Conread position: | 23-316 |
| Cow position: | chr28:25762344-25762068 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 93, 20 |
| Conread position: | 23-331 |
| Cow position: | chr28:7784692-7785009 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 125 |
| Conread position: | 23-338 |
| Cow position: | chr28:13373018-13373328 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 92 |
| Conread position: | 23-338 |
| Cow position: | chr28:15687823-15687508 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 183 |
| Conread position: | 24-197 |
| Cow position: | chr28:29199005-29198827 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 24-203 |
| Cow position: | chr28:13473133-13472954 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 92, 64 |
| Conread position: | 24-261 |
| Cow position: | chr28:5817149-5816907 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 74, 80 |
| Conread position: | 24-298 |
| Cow position: | chr28:16211807-16212079 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 92, 172 |
| Conread position: | 24-326 |
| Cow position: | chr28:20310463-20310158 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 92, 182 |
| Conread position: | 24-338 |
| Cow position: | chr28:7744628-7744307 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 185 |
| Conread position: | 24-338 |
| Cow position: | chr28:17602513-17602833 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 91, 182 |
| Conread position: | 24-338 |
| Cow position: | chr28:21363035-21362722 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 19 |
| Conread position: | 25-209 |
| Cow position: | chr28:24671548-24671360 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 89, 132 |
| Conread position: | 25-219 |
| Cow position: | chr28:1199911-1199707 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 187 |
| Conread position: | 25-219 |
| Cow position: | chr28:17686114-17686312 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 33 |
| Conread position: | 25-330 |
| Cow position: | chr28:1024806-1025115 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 181 |
| Conread position: | 25-337 |
| Cow position: | chr28:26923102-26923419 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 181 |
| Conread position: | 25-338 |
| Cow position: | chr28:13606957-13606642 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 91, 150 |
| Conread position: | 25-338 |
| Cow position: | chr28:17030571-17030885 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 181 |
| Conread position: | 25-338 |
| Cow position: | chr28:17599458-17599783 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 76 |
| Conread position: | 25-338 |
| Cow position: | chr28:23615671-23615353 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 181 |
| Conread position: | 26-161 |
| Cow position: | chr28:34850680-34850540 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 26-196 |
| Cow position: | chr28:24644986-24644811 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 26-203 |
| Cow position: | chr28:13865077-13864894 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 26-206 |
| Cow position: | chr28:11787433-11787613 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 90, 58 |
| Conread position: | 26-222 |
| Cow position: | chr28:12156205-12156005 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 90, 170 |
| Conread position: | 26-272 |
| Cow position: | chr28:7981437-7981684 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 26-287 |
| Cow position: | chr28:23800788-23800527 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 87, 170 |
| Conread position: | 26-318 |
| Cow position: | chr28:3188491-3188786 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 170 |
| Conread position: | 26-319 |
| Cow position: | chr28:12650743-12650448 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 35 |
| Conread position: | 26-322 |
| Cow position: | chr28:1811458-1811747 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 90, 174 |
| Conread position: | 26-322 |
| Cow position: | chr28:24997382-24997686 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 90, 186 |
| Conread position: | 26-333 |
| Cow position: | chr28:7005554-7005242 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 171 |
| Conread position: | 26-336 |
| Cow position: | chr28:786187-785879 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 90, 151 |
| Conread position: | 26-337 |
| Cow position: | chr28:30870600-30870283 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 182 |
| Conread position: | 26-338 |
| Cow position: | chr28:5748180-5748496 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 170 |
| Conread position: | 26-338 |
| Cow position: | chr28:5772934-5772628 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 90, 128 |
| Conread position: | 26-338 |
| Cow position: | chr28:5825371-5825059 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 37 |
| Conread position: | 26-338 |
| Cow position: | chr28:6478744-6478429 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 180 |
| Conread position: | 26-338 |
| Cow position: | chr28:6959755-6959439 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 180 |
| Conread position: | 26-338 |
| Cow position: | chr28:10772602-10772293 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 170 |
| Conread position: | 26-338 |
| Cow position: | chr28:12165986-12166289 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 189, 70 |
| Conread position: | 26-338 |
| Cow position: | chr28:12935748-12936064 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 167 |
| Conread position: | 26-338 |
| Cow position: | chr28:13463489-13463173 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 166 |
| Conread position: | 26-338 |
| Cow position: | chr28:15265856-15266177 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 90, 261 |
| Conread position: | 26-338 |
| Cow position: | chr28:15917001-15917315 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 180 |
| Conread position: | 26-338 |
| Cow position: | chr28:16597673-16597360 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 180 |
| Conread position: | 26-338 |
| Cow position: | chr28:17391959-17391643 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 170 |
| Conread position: | 26-338 |
| Cow position: | chr28:17663423-17663739 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 170 |
| Conread position: | 26-338 |
| Cow position: | chr28:18516619-18516936 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 171 |
| Conread position: | 26-338 |
| Cow position: | chr28:21104453-21104759 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 180 |
| Conread position: | 26-338 |
| Cow position: | chr28:22254676-22254988 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 65 |
| Conread position: | 26-338 |
| Cow position: | chr28:28357258-28357574 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 180 |
| Conread position: | 26-338 |
| Cow position: | chr28:28723749-28723437 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 165 |
| Conread position: | 26-338 |
| Cow position: | chr28:29036126-29036442 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 170 |
| Conread position: | 26-338 |
| Cow position: | chr28:29823711-29823396 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 170 |
| Conread position: | 26-338 |
| Cow position: | chr28:30098402-30098088 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 170 |
| Conread position: | 26-338 |
| Cow position: | chr28:30961064-30960756 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 119, 146 |
| Conread position: | 26-338 |
| Cow position: | chr28:33255846-33255531 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 60 |
| Conread position: | 26-338 |
| Cow position: | chr28:34082744-34083061 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 182 |
| Conread position: | 26-338 |
| Cow position: | chr28:34597771-34597454 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 171 |
| Conread position: | 26-338 |
| Cow position: | chr28:34878924-34879230 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 106 |
| Conread position: | 27-193 |
| Cow position: | chr28:13357440-13357605 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 18 |
| Conread position: | 27-201 |
| Cow position: | chr28:25726651-25726472 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 27-228 |
| Cow position: | chr28:30328404-30328604 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 87, 166 |
| Conread position: | 27-233 |
| Cow position: | chr28:15032575-15032786 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 16, 170 |
| Conread position: | 27-261 |
| Cow position: | chr28:19194044-19193806 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 89, 169 |
| Conread position: | 27-326 |
| Cow position: | chr28:10643018-10643304 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 27-330 |
| Cow position: | chr28:10578571-10578880 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 255 |
| Conread position: | 27-338 |
| Cow position: | chr28:5804789-5804479 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 88, 25 |
| Conread position: | 27-338 |
| Cow position: | chr28:6473731-6474042 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 179 |
| Conread position: | 27-338 |
| Cow position: | chr28:10280361-10280062 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 38 |
| Conread position: | 27-338 |
| Cow position: | chr28:13725456-13725145 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 86, 60 |
| Conread position: | 27-338 |
| Cow position: | chr28:26419475-26419791 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 170 |
| Conread position: | 27-338 |
| Cow position: | chr28:29435282-29435591 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 179 |
| Conread position: | 28-338 |
| Cow position: | chr28:6535274-6535588 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 178 |
| Conread position: | 29-197 |
| Cow position: | chr28:17369576-17369403 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 29-234 |
| Cow position: | chr28:30249649-30249440 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-316 |
| Cow position: | chr28:958381-958092 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 51, 116 |
| Conread position: | 29-318 |
| Cow position: | chr28:7888562-7888856 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-330 |
| Cow position: | chr28:5336282-5336587 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-336 |
| Cow position: | chr28:1383930-1384243 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-337 |
| Cow position: | chr28:24886383-24886071 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-337 |
| Cow position: | chr28:28471542-28471236 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 51 |
| Conread position: | 29-338 |
| Cow position: | chr28:444931-444618 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-338 |
| Cow position: | chr28:1198718-1198405 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-338 |
| Cow position: | chr28:1943773-1944085 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-338 |
| Cow position: | chr28:1956886-1956579 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 140 |
| Conread position: | 29-338 |
| Cow position: | chr28:2645236-2644925 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 128 |
| Conread position: | 29-338 |
| Cow position: | chr28:3627536-3627223 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 164 |
| Conread position: | 29-338 |
| Cow position: | chr28:5637573-5637260 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-338 |
| Cow position: | chr28:5941009-5940696 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 167 |
| Conread position: | 29-338 |
| Cow position: | chr28:6060778-6061071 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 87, 58 |
| Conread position: | 29-338 |
| Cow position: | chr28:7059753-7059440 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-338 |
| Cow position: | chr28:7336506-7336193 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-338 |
| Cow position: | chr28:9287870-9288183 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-338 |
| Cow position: | chr28:10194082-10194395 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-338 |
| Cow position: | chr28:10303360-10303048 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 176 |
| Conread position: | 29-338 |
| Cow position: | chr28:10479377-10479680 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 29-338 |
| Cow position: | chr28:14150514-14150198 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 180 |
| Conread position: | 29-338 |
| Cow position: | chr28:21896804-21896492 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 45 |
| Conread position: | 29-338 |
| Cow position: | chr28:23309813-23310126 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-338 |
| Cow position: | chr28:23544146-23543836 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 178 |
| Conread position: | 29-338 |
| Cow position: | chr28:25828918-25828605 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 29-338 |
| Cow position: | chr28:30966724-30966415 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 165 |
| Conread position: | 29-338 |
| Cow position: | chr28:34731254-34730942 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 163 |
| Conread position: | 30-220 |
| Cow position: | chr28:30369513-30369317 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 116 |
| Conread position: | 30-247 |
| Cow position: | chr28:17131614-17131836 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 86, 176 |
| Conread position: | 30-265 |
| Cow position: | chr28:24588723-24588964 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 177 |
| Conread position: | 30-269 |
| Cow position: | chr28:9710631-9710876 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 177 |
| Conread position: | 30-270 |
| Cow position: | chr28:12701390-12701144 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 17, 177 |
| Conread position: | 30-272 |
| Cow position: | chr28:6319629-6319870 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 109, 132 |
| Conread position: | 30-272 |
| Cow position: | chr28:22307701-22307466 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 86, 69 |
| Conread position: | 30-332 |
| Cow position: | chr28:10870612-10870306 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 140 |
| Conread position: | 30-338 |
| Cow position: | chr28:482187-482498 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 143 |
| Conread position: | 30-338 |
| Cow position: | chr28:4214412-4214102 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 176 |
| Conread position: | 30-338 |
| Cow position: | chr28:4457852-4457539 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 90, 61 |
| Conread position: | 30-338 |
| Cow position: | chr28:5211644-5211332 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 167 |
| Conread position: | 30-338 |
| Cow position: | chr28:6776481-6776793 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 176 |
| Conread position: | 30-338 |
| Cow position: | chr28:9182391-9182079 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 176 |
| Conread position: | 30-338 |
| Cow position: | chr28:10473480-10473177 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 166 |
| Conread position: | 30-338 |
| Cow position: | chr28:13323656-13323343 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 177 |
| Conread position: | 30-338 |
| Cow position: | chr28:15054679-15054366 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 177 |
| Conread position: | 30-338 |
| Cow position: | chr28:22201471-22201165 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 30-338 |
| Cow position: | chr28:23675335-23675024 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 86, 176 |
| Conread position: | 30-338 |
| Cow position: | chr28:24993010-24992697 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 177 |
| Conread position: | 30-338 |
| Cow position: | chr28:25850084-25849771 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 177 |
| Conread position: | 30-338 |
| Cow position: | chr28:32589222-32588909 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 177 |
| Conread position: | 30-338 |
| Cow position: | chr28:33640090-33639780 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 166 |
| Conread position: | 31-228 |
| Cow position: | chr28:15497964-15498153 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 31-233 |
| Cow position: | chr28:30031864-30031657 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 16, 176 |
| Conread position: | 31-320 |
| Cow position: | chr28:3653124-3652839 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 85, 176 |
| Conread position: | 31-336 |
| Cow position: | chr28:21569419-21569105 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 64, 180 |
| Conread position: | 31-338 |
| Cow position: | chr28:3001338-3001646 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 85, 175 |
| Conread position: | 31-338 |
| Cow position: | chr28:8717432-8717743 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 175 |
| Conread position: | 31-338 |
| Cow position: | chr28:10162745-10162439 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 85, 70 |
| Conread position: | 31-338 |
| Cow position: | chr28:14666666-14666356 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 175 |
| Conread position: | 31-338 |
| Cow position: | chr28:15429186-15428879 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 85, 97 |
| Conread position: | 31-338 |
| Cow position: | chr28:23868759-23868448 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 162 |
| Conread position: | 31-338 |
| Cow position: | chr28:32785912-32786217 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 50 |
| Conread position: | 32-185 |
| Cow position: | chr28:2123083-2122924 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 149 |
| Conread position: | 32-338 |
| Cow position: | chr28:23620462-23620173 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 33-316 |
| Cow position: | chr28:8786835-8786548 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 105, 79 |
| Conread position: | 34-338 |
| Cow position: | chr28:10295317-10295016 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 135 |
| Conread position: | 34-338 |
| Cow position: | chr28:16181887-16181578 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 160 |
| Conread position: | 34-338 |
| Cow position: | chr28:25826594-25826908 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 62, 179 |
| Conread position: | 37-263 |
| Cow position: | chr28:1214266-1214497 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 79, 159 |
| Conread position: | 38-338 |
| Cow position: | chr28:10575507-10575815 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 78, 48 |
| Conread position: | 40-320 |
| Cow position: | chr28:5768462-5768179 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 166 |
| Conread position: | 45-338 |
| Cow position: | chr28:21767797-21768083 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 136 |
| Conread position: | 47-209 |
| Cow position: | chr28:14740912-14740749 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 143, 94 |
| Conread position: | 50-338 |
| Cow position: | chr28:20934910-20935202 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 146 |
| Conread position: | 56-338 |
| Cow position: | chr28:25070343-25070057 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 150 |
| Conread position: | 62-305 |
| Cow position: | chr28:12406674-12406919 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 53, 132 |
| Conread position: | 65-336 |
| Cow position: | chr28:15600270-15600525 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 54, 83 |
Show alignments to all cow chromosomes.