Cow genome map

Conread name: mE6-MI-P-E6-acg-d-10-1-UM.s1

Conread position: 20-215
Cow position: chr5:6839870-6840061 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 96, 31

Conread position: 21-197
Cow position: chr5:14313589-14313410 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 23

Conread position: 21-272
Cow position: chr5:6670857-6671104 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 74

Conread position: 21-285
Cow position: chr5:42676564-42676300 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 95, 188

Conread position: 21-338
Cow position: chr5:48574506-48574819 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 92, 190

Conread position: 23-193
Cow position: chr5:54454814-54454640 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 23-213
Cow position: chr5:1780263-1780459 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 93, 62

Conread position: 23-213
Cow position: chr5:66256951-66256757 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 93, 146

Conread position: 23-227
Cow position: chr5:39749123-39749331 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 183

Conread position: 23-229
Cow position: chr5:72007574-72007784 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 183

Conread position: 23-248
Cow position: chr5:6219263-6219033 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 71, 62

Conread position: 23-265
Cow position: chr5:14904760-14904999 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 91, 176

Conread position: 23-273
Cow position: chr5:35180448-35180193 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 173

Conread position: 23-331
Cow position: chr5:62159608-62159917 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 89

Conread position: 23-332
Cow position: chr5:45941679-45941985 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 150

Conread position: 23-338
Cow position: chr5:7140781-7141100 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 257

Conread position: 23-338
Cow position: chr5:18491727-18491405 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 93, 189

Conread position: 23-338
Cow position: chr5:46671923-46671610 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 182

Conread position: 23-338
Cow position: chr5:47871789-47872106 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 183

Conread position: 23-338
Cow position: chr5:64958463-64958779 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 64, 78

Conread position: 24-332
Cow position: chr5:6576274-6576587 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 75

Conread position: 24-333
Cow position: chr5:51684299-51684616 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 65

Conread position: 24-338
Cow position: chr5:4630078-4629768 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 92, 162

Conread position: 24-338
Cow position: chr5:28223757-28223440 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 158

Conread position: 24-338
Cow position: chr5:31634754-31634438 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 166

Conread position: 24-338
Cow position: chr5:32964742-32965065 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 89, 123

Conread position: 24-338
Cow position: chr5:52605306-52605625 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 211
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 92, 251

Conread position: 24-338
Cow position: chr5:54721970-54721655 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 96, 158

Conread position: 24-338
Cow position: chr5:75755890-75755585 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 138

Conread position: 25-219
Cow position: chr5:40828063-40828260 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 114, 170

Conread position: 25-229
Cow position: chr5:17425833-17426041 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 114, 171

Conread position: 25-265
Cow position: chr5:12558261-12558509 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 184

Conread position: 25-315
Cow position: chr5:25913035-25912743 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 182

Conread position: 25-321
Cow position: chr5:32697475-32697785 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 82, 63

Conread position: 25-333
Cow position: chr5:41980707-41980421 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 91, 156

Conread position: 25-337
Cow position: chr5:2917778-2917463 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 108

Conread position: 25-338
Cow position: chr5:12235009-12234697 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 204
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 73

Conread position: 25-338
Cow position: chr5:17027382-17027077 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 120, 87

Conread position: 25-338
Cow position: chr5:23648113-23648429 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 213
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 88, 119

Conread position: 25-338
Cow position: chr5:46625960-46626276 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 171

Conread position: 26-182
Cow position: chr5:54868532-54868371 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 26-197
Cow position: chr5:411403-411579 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 26-197
Cow position: chr5:36724412-36724584 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 113, 81

Conread position: 26-203
Cow position: chr5:15478024-15477841 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 26-211
Cow position: chr5:5787014-5787203 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 90, 180

Conread position: 26-214
Cow position: chr5:3204146-3203962 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 26-219
Cow position: chr5:50599373-50599178 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 178

Conread position: 26-230
Cow position: chr5:52041173-52041375 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 90, 122

Conread position: 26-250
Cow position: chr5:53185187-53185414 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 59

Conread position: 26-253
Cow position: chr5:7042557-7042326 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 90, 179

Conread position: 26-263
Cow position: chr5:1344575-1344821 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 119, 142

Conread position: 26-274
Cow position: chr5:279864-280116 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 90, 169

Conread position: 26-281
Cow position: chr5:7498669-7498928 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 90, 170

Conread position: 26-281
Cow position: chr5:58353521-58353275 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 91, 77

Conread position: 26-286
Cow position: chr5:27549198-27549455 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 90, 123

Conread position: 26-291
Cow position: chr5:43437626-43437895 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-297
Cow position: chr5:45705327-45705053 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 201
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 90, 180

Conread position: 26-302
Cow position: chr5:7175614-7175334 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-303
Cow position: chr5:1105562-1105837 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 90, 155

Conread position: 26-320
Cow position: chr5:26101051-26100751 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 196

Conread position: 26-323
Cow position: chr5:44709056-44709355 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-332
Cow position: chr5:16085494-16085803 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 181

Conread position: 26-336
Cow position: chr5:32755135-32755442 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 143

Conread position: 26-336
Cow position: chr5:34709085-34708771 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:442993-443309 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position: chr5:445795-445479 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 187

Conread position: 26-338
Cow position: chr5:1338605-1338921 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 167

Conread position: 26-338
Cow position: chr5:3500812-3501128 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:6151516-6151832 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:7396559-7396248 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 154

Conread position: 26-338
Cow position: chr5:10542360-10542670 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:10922161-10921845 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:12133909-12133594 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 180

Conread position: 26-338
Cow position: chr5:14551285-14551601 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position: chr5:15677375-15677061 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 44

Conread position: 26-338
Cow position: chr5:15855916-15856228 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 65

Conread position: 26-338
Cow position: chr5:18404742-18405054 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 178

Conread position: 26-338
Cow position: chr5:18901635-18901334 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 113, 179

Conread position: 26-338
Cow position: chr5:19978598-19978914 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:21189534-21189221 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 167

Conread position: 26-338
Cow position: chr5:23354056-23353741 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 167

Conread position: 26-338
Cow position: chr5:23828881-23829174 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 89, 101

Conread position: 26-338
Cow position: chr5:23845236-23845540 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 90, 146

Conread position: 26-338
Cow position: chr5:24087734-24088052 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position: chr5:24101966-24101650 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 170

Conread position: 26-338
Cow position: chr5:24299329-24299013 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:27178951-27178649 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position: chr5:27195746-27196060 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position: chr5:27691296-27690989 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 96

Conread position: 26-338
Cow position: chr5:29634745-29634429 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 121

Conread position: 26-338
Cow position: chr5:29742245-29742557 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:31921374-31921062 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 73

Conread position: 26-338
Cow position: chr5:32810714-32811026 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 62

Conread position: 26-338
Cow position: chr5:37735691-37735376 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 74

Conread position: 26-338
Cow position: chr5:42744106-42743793 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 87, 166

Conread position: 26-338
Cow position: chr5:46676929-46676613 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:47343189-47342874 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:47471712-47471393 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 260

Conread position: 26-338
Cow position: chr5:48805154-48805451 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 26-338
Cow position: chr5:49117035-49117351 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 181

Conread position: 26-338
Cow position: chr5:49221183-49221493 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 155

Conread position: 26-338
Cow position: chr5:49522019-49521704 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 174

Conread position: 26-338
Cow position: chr5:49565880-49565573 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 116

Conread position: 26-338
Cow position: chr5:52829471-52829784 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 33

Conread position: 26-338
Cow position: chr5:54785792-54786108 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:55631380-55631064 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:58245648-58245332 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 144

Conread position: 26-338
Cow position: chr5:58461377-58461697 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 147

Conread position: 26-338
Cow position: chr5:58770556-58770870 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:64778685-64779002 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 171

Conread position: 26-338
Cow position: chr5:64844952-64845265 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 26-338
Cow position: chr5:72857191-72856874 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 181

Conread position: 26-338
Cow position: chr5:73485570-73485899 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 170

Conread position: 26-338
Cow position: chr5:76098714-76099030 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 180

Conread position: 27-220
Cow position: chr5:39936414-39936217 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 89, 178

Conread position: 27-231
Cow position: chr5:29968923-29968715 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 85, 169

Conread position: 27-316
Cow position: chr5:6571936-6572221 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 93, 138

Conread position: 27-325
Cow position: chr5:15723000-15723303 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 89, 180

Conread position: 27-331
Cow position: chr5:48225264-48225571 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 111, 90

Conread position: 27-331
Cow position: chr5:54337218-54336909 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 180

Conread position: 27-338
Cow position: chr5:10853518-10853832 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 170

Conread position: 27-338
Cow position: chr5:18558102-18558404 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 56

Conread position: 27-338
Cow position: chr5:21188250-21187934 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 167

Conread position: 27-338
Cow position: chr5:43991597-43991282 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 169

Conread position: 27-338
Cow position: chr5:46707952-46707640 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 179

Conread position: 27-338
Cow position: chr5:46734961-46735276 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 170

Conread position: 27-338
Cow position: chr5:47560244-47560561 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 181

Conread position: 27-338
Cow position: chr5:47855142-47854835 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 120

Conread position: 27-338
Cow position: chr5:63312209-63312518 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 202
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 86, 163

Conread position: 28-189
Cow position: chr5:25496095-25496261 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 28-215
Cow position: chr5:12872760-12872570 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 86, 165

Conread position: 28-323
Cow position: chr5:41523681-41523984 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 174

Conread position: 28-332
Cow position: chr5:58192229-58191924 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 56

Conread position: 28-336
Cow position: chr5:4165941-4165633 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 114

Conread position: 28-336
Cow position: chr5:54089027-54088732 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 109, 191

Conread position: 28-337
Cow position: chr5:31916925-31916624 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 88, 142

Conread position: 28-338
Cow position: chr5:17645768-17646085 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 255

Conread position: 28-338
Cow position: chr5:34192235-34191923 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 157

Conread position: 28-338
Cow position: chr5:54136324-54136638 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 178

Conread position: 28-338
Cow position: chr5:54927608-54927919 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 56

Conread position: 28-338
Cow position: chr5:54929936-54930247 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 56

Conread position: 28-338
Cow position: chr5:69519914-69519597 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 255

Conread position: 29-189
Cow position: chr5:39216568-39216403 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 29-231
Cow position: chr5:6060318-6060524 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 87, 177

Conread position: 29-233
Cow position: chr5:59268723-59268522 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 87, 117

Conread position: 29-238
Cow position: chr5:50728619-50728399 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 29-250
Cow position: chr5:43984397-43984171 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 87, 167

Conread position: 29-256
Cow position: chr5:67814175-67813941 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 87, 177

Conread position: 29-258
Cow position: chr5:2394995-2395229 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 84, 177

Conread position: 29-291
Cow position: chr5:46797213-46796955 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 153

Conread position: 29-303
Cow position: chr5:75754811-75755082 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 87, 139

Conread position: 29-323
Cow position: chr5:39363185-39362887 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-332
Cow position: chr5:44275908-44275607 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-336
Cow position: chr5:5715776-5716073 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 174

Conread position: 29-338
Cow position: chr5:295574-295265 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 55

Conread position: 29-338
Cow position: chr5:1059254-1059567 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:1395149-1395458 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:2977098-2976786 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 55

Conread position: 29-338
Cow position: chr5:3544609-3544308 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 116

Conread position: 29-338
Cow position: chr5:4015559-4015872 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:4388494-4388179 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 116, 78

Conread position: 29-338
Cow position: chr5:4683188-4683500 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 176

Conread position: 29-338
Cow position: chr5:4753820-4754133 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:4963073-4963380 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:5106536-5106224 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 125

Conread position: 29-338
Cow position: chr5:5924664-5924969 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 85, 177

Conread position: 29-338
Cow position: chr5:6032290-6031989 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 33, 122

Conread position: 29-338
Cow position: chr5:6124850-6125162 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 45

Conread position: 29-338
Cow position: chr5:6585141-6585453 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 167

Conread position: 29-338
Cow position: chr5:6694847-6694534 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:6772878-6772568 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 176

Conread position: 29-338
Cow position: chr5:8996698-8997006 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 205

Conread position: 29-338
Cow position: chr5:10066237-10066550 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:10772517-10772826 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 167

Conread position: 29-338
Cow position: chr5:14542988-14543301 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:14636266-14636578 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 167

Conread position: 29-338
Cow position: chr5:18667620-18667307 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:20107717-20108027 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 78

Conread position: 29-338
Cow position: chr5:27907155-27907462 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 119

Conread position: 29-338
Cow position: chr5:29255901-29256212 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:30582639-30582326 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 167

Conread position: 29-338
Cow position: chr5:31709613-31709300 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 55

Conread position: 29-338
Cow position: chr5:34683049-34683360 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 143

Conread position: 29-338
Cow position: chr5:41067323-41067025 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 83, 173

Conread position: 29-338
Cow position: chr5:41411125-41411438 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 250

Conread position: 29-338
Cow position: chr5:41488982-41488670 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 47

Conread position: 29-338
Cow position: chr5:41547706-41548007 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 44

Conread position: 29-338
Cow position: chr5:41586587-41586274 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:45179534-45179846 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 167

Conread position: 29-338
Cow position: chr5:46667387-46667074 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:46779827-46779516 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 45

Conread position: 29-338
Cow position: chr5:46816790-46817102 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 176

Conread position: 29-338
Cow position: chr5:48026581-48026269 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 164

Conread position: 29-338
Cow position: chr5:51746531-51746224 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 164

Conread position: 29-338
Cow position: chr5:52822895-52823207 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 176

Conread position: 29-338
Cow position: chr5:54951809-54952122 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:55722842-55722529 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:56442570-56442259 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 163

Conread position: 29-338
Cow position: chr5:57336051-57336364 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 177

Conread position: 29-338
Cow position: chr5:58199322-58199010 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 134

Conread position: 29-338
Cow position: chr5:59064756-59064444 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 128

Conread position: 29-338
Cow position: chr5:68593733-68593431 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 83

Conread position: 30-174
Cow position: chr5:32081236-32081385 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 30-192
Cow position: chr5:68273536-68273704 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 30-220
Cow position: chr5:59146921-59146726 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 177

Conread position: 30-233
Cow position: chr5:58900731-58900939 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 17, 177

Conread position: 30-284
Cow position: chr5:28013170-28012911 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 177

Conread position: 30-337
Cow position: chr5:42283476-42283171 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 101

Conread position: 30-338
Cow position: chr5:3789535-3789228 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 144

Conread position: 30-338
Cow position: chr5:8178446-8178139 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 166

Conread position: 30-338
Cow position: chr5:11631672-11631985 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 177

Conread position: 30-338
Cow position: chr5:12212846-12212533 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position: chr5:13807445-13807751 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 151

Conread position: 30-338
Cow position: chr5:18118663-18118975 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 176

Conread position: 30-338
Cow position: chr5:26053044-26052731 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position: chr5:29763219-29762925 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 86, 54

Conread position: 30-338
Cow position: chr5:36369679-36369992 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 177

Conread position: 30-338
Cow position: chr5:37380398-37380087 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 176

Conread position: 30-338
Cow position: chr5:37626159-37625859 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 78

Conread position: 30-338
Cow position: chr5:51165998-51166309 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 165

Conread position: 30-338
Cow position: chr5:53834964-53834654 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 86, 166

Conread position: 31-228
Cow position: chr5:39448235-39448436 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 16, 116

Conread position: 31-338
Cow position: chr5:4434192-4434504 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 176

Conread position: 31-338
Cow position: chr5:12337586-12337274 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 176

Conread position: 31-338
Cow position: chr5:25928390-25928698 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 91, 19

Conread position: 31-338
Cow position: chr5:28016367-28016048 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 82, 257

Conread position: 31-338
Cow position: chr5:32088468-32088772 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 115

Conread position: 31-338
Cow position: chr5:58004540-58004236 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 85, 160

Conread position: 32-336
Cow position: chr5:35207552-35207244 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 174

Conread position: 32-338
Cow position: chr5:40270534-40270839 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 51, 70

Conread position: 33-228
Cow position: chr5:37384226-37384425 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 78, 173

Conread position: 33-300
Cow position: chr5:34527875-34527615 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 83, 96

Conread position: 33-338
Cow position: chr5:19969733-19970032 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 83, 169

Conread position: 33-338
Cow position: chr5:41392041-41391729 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 58, 177

Conread position: 34-185
Cow position: chr5:31217401-31217244 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 34-315
Cow position: chr5:34559453-34559172 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 82, 171

Conread position: 34-337
Cow position: chr5:26466932-26466640 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 80, 139

Conread position: 34-338
Cow position: chr5:9002801-9003111 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 160

Conread position: 34-338
Cow position: chr5:26096583-26096285 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 11

Conread position: 35-178
Cow position: chr5:52646033-52646181 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 35-337
Cow position: chr5:27491284-27490976 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 172

Conread position: 36-338
Cow position: chr5:18703126-18703425 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 53

Conread position: 36-338
Cow position: chr5:18883304-18883607 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 65

Conread position: 36-338
Cow position: chr5:34669783-34670089 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 76, 170

Conread position: 38-273
Cow position: chr5:13258890-13258654 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 50

Conread position: 43-338
Cow position: chr5:26134968-26135267 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 164

Conread position: 45-321
Cow position: chr5:21828117-21827837 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 202
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 51

Conread position: 45-325
Cow position: chr5:6180836-6180549 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 240

Conread position: 45-338
Cow position: chr5:72046367-72046663 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 75, 160

Conread position: 49-338
Cow position: chr5:36906770-36907062 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 10

Conread position: 50-304
Cow position: chr5:8529937-8529685 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 128

Conread position: 50-336
Cow position: chr5:6044290-6044003 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 66, 156

Conread position: 50-338
Cow position: chr5:30294595-30294309 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 69, 93

Conread position: 50-338
Cow position: chr5:59146669-59146377 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 156

Conread position: 55-338
Cow position: chr5:17387130-17387417 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 151

Conread position: 59-309
Cow position: chr5:41548267-41548514 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 51

Conread position: 59-337
Cow position: chr5:33536894-33536618 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 142

Conread position: 59-338
Cow position: chr5:29459175-29458916 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 62-322
Cow position: chr5:24643594-24643854 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 81

Show alignments to all cow chromosomes.