Cow genome map

Conread name: mE6-MI-P-E6-acx-c-02-1-UM.s1

Conread position: 1-166
Cow position: chr1:85338830-85338996 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 119

Conread position: 1-177
Cow position: chr1:59019475-59019653 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 107

Conread position: 1-180
Cow position: chr1:42869450-42869277 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 7, 67

Conread position: 1-182
Cow position: chr1:72104849-72105023 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 37

Conread position: 1-185
Cow position: chr1:72813117-72813298 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 14, 116

Conread position: 1-190
Cow position: chr1:102289494-102289306 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 147

Conread position: 1-205
Cow position: chr1:58439339-58439143 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 7, 46

Conread position: 1-205
Cow position: chr1:61149831-61149630 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 40

Conread position: 1-227
Cow position: chr1:40062150-40062381 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 12, 0

Conread position: 1-235
Cow position: chr1:33716922-33717165 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 140

Conread position: 1-250
Cow position: chr1:67014086-67014334 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 11, 189

Conread position: 1-268
Cow position: chr1:732223-731970 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 11, 123

Conread position: 1-269
Cow position: chr1:4589779-4589502 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 11, 143

Conread position: 1-269
Cow position: chr1:15311570-15311842 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 139

Conread position: 1-269
Cow position: chr1:83982674-83982398 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 41

Conread position: 1-269
Cow position: chr1:92370657-92370387 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 11, 68

Conread position: 1-270
Cow position: chr1:20125313-20125588 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 41

Conread position: 1-273
Cow position: chr1:8532512-8532235 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 99

Conread position: 1-276
Cow position: chr1:56228954-56229227 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 8, 125

Conread position: 1-276
Cow position: chr1:79590802-79591086 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 139

Conread position: 1-278
Cow position: chr1:666062-666346 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 123

Conread position: 1-278
Cow position: chr1:1877728-1878012 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 140

Conread position: 1-279
Cow position: chr1:69941263-69940983 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 11, 30

Conread position: 1-283
Cow position: chr1:99614154-99614437 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 9, 58

Conread position: 1-306
Cow position: chr1:12596202-12595895 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 8, 107

Conread position: 1-320
Cow position: chr1:44836530-44836211 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 12, 126

Conread position: 1-325
Cow position: chr1:61725411-61725097 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 231
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 11, 142

Conread position: 1-337
Cow position: chr1:76222989-76222659 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 11, 138

Conread position: 1-344
Cow position: chr1:47008734-47009069 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 8, 30

Conread position: 1-347
Cow position: chr1:73561947-73561608 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 7, 57

Conread position: 1-353
Cow position: chr1:95017809-95017484 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 7, 15

Conread position: 1-365
Cow position: chr1:26811097-26810740 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 242
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 127

Conread position: 1-367
Cow position: chr1:52372116-52372474 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 11, 116

Conread position: 1-367
Cow position: chr1:86599031-86598672 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 246
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 36

Conread position: 1-368
Cow position: chr1:24235816-24235459 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 75

Conread position: 1-373
Cow position: chr1:102647567-102647208 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 123

Conread position: 1-377
Cow position: chr1:68276109-68276480 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 7, 138

Conread position: 1-378
Cow position: chr1:3381952-3381584 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 253
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 124

Conread position: 1-378
Cow position: chr1:28877058-28877430 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 261
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 141

Conread position: 1-378
Cow position: chr1:30531072-30530702 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 252
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 10, 95

Conread position: 1-378
Cow position: chr1:82502561-82502942 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 257
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 7, 103

Conread position: 1-378
Cow position: chr1:91817069-91816701 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 35

Conread position: 1-378
Cow position: chr1:100707991-100707624 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 248
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 115

Conread position: 1-379
Cow position: chr1:77103147-77102770 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 244
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 29

Conread position: 1-389
Cow position: chr1:31765693-31765292 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 76

Conread position: 1-389
Cow position: chr1:52753464-52753079 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 139

Conread position: 1-389
Cow position: chr1:63596359-63595973 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 11, 143

Conread position: 1-393
Cow position: chr1:99136728-99136344 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 122

Conread position: 1-394
Cow position: chr1:63391070-63390681 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 74

Conread position: 1-397
Cow position: chr1:85596648-85597027 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 67

Conread position: 1-409
Cow position: chr1:26943012-26943409 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 269
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 28

Conread position: 1-415
Cow position: chr1:88652333-88652743 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 122

Conread position: 1-418
Cow position: chr1:81356001-81355593 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 147

Conread position: 1-419
Cow position: chr1:82884683-82884284 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 75

Conread position: 1-423
Cow position: chr1:95215476-95215075 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 30

Conread position: 1-425
Cow position: chr1:53424894-53425294 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 46

Conread position: 1-427
Cow position: chr1:68253293-68253714 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 167

Conread position: 1-429
Cow position: chr1:89349679-89350086 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 123

Conread position: 1-432
Cow position: chr1:8349605-8349200 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 11

Conread position: 1-436
Cow position: chr1:11914170-11913749 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 43

Conread position: 1-438
Cow position: chr1:11226543-11226118 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 138

Conread position: 1-438
Cow position: chr1:98360712-98360274 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 287

Conread position: 1-440
Cow position: chr1:21460572-21461003 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 302
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 60

Conread position: 1-440
Cow position: chr1:37887084-37886680 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 306
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 50

Conread position: 1-440
Cow position: chr1:61005860-61005431 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 32

Conread position: 1-441
Cow position: chr1:79844171-79844598 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 122

Conread position: 1-448
Cow position: chr1:84255455-84255908 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 74

Conread position: 1-456
Cow position: chr1:95499793-95499349 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 138

Conread position: 1-467
Cow position: chr1:98551422-98551883 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 24

Conread position: 1-472
Cow position: chr1:76019978-76019526 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 80

Conread position: 1-475
Cow position: chr1:101792394-101791943 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 321
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 25

Conread position: 1-489
Cow position: chr1:21092794-21093309 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 23

Conread position: 1-492
Cow position: chr1:77720525-77720067 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 58

Conread position: 1-497
Cow position: chr1:92963092-92963577 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 131

Conread position: 1-499
Cow position: chr1:54258274-54258769 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 29

Conread position: 1-504
Cow position: chr1:53374136-53374633 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 140

Conread position: 1-504
Cow position: chr1:56225180-56225671 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 32

Conread position: 1-504
Cow position: chr1:61564496-61564986 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 30

Conread position: 1-504
Cow position: chr1:85028663-85029141 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 86

Conread position: 1-505
Cow position: chr1:21577509-21578016 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 345
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 48

Conread position: 1-505
Cow position: chr1:72012105-72011616 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 120

Conread position: 1-505
Cow position: chr1:102266569-102266064 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 127

Conread position: 1-506
Cow position: chr1:41056386-41056886 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 106

Conread position: 1-506
Cow position: chr1:96964021-96964526 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 124

Conread position: 1-506
Cow position: chr1:100325035-100324547 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 354
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 7, 134

Conread position: 1-507
Cow position: chr1:43822079-43822590 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 295

Conread position: 1-507
Cow position: chr1:100400496-100399994 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 30

Conread position: 1-508
Cow position: chr1:81569334-81568820 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 274

Conread position: 1-509
Cow position: chr1:874345-874874 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 118

Conread position: 1-509
Cow position: chr1:54207113-54206609 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 82

Conread position: 1-510
Cow position: chr1:20002550-20002022 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 353
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 139

Conread position: 1-510
Cow position: chr1:96365376-96365860 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 98

Conread position: 1-511
Cow position: chr1:7739675-7740155 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 27

Conread position: 1-511
Cow position: chr1:11772379-11771870 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 332
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 124

Conread position: 1-511
Cow position: chr1:36997899-36998394 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 75

Conread position: 1-511
Cow position: chr1:52496478-52496981 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 358
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 11, 144

Conread position: 1-511
Cow position: chr1:72035227-72034715 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 102

Conread position: 1-511
Cow position: chr1:72069125-72068621 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 122

Conread position: 1-511
Cow position: chr1:77620248-77620762 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 127

Conread position: 1-512
Cow position: chr1:42256808-42256292 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 144

Conread position: 1-512
Cow position: chr1:48444476-48443978 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 30

Conread position: 1-512
Cow position: chr1:53622670-53623169 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 30

Conread position: 1-512
Cow position: chr1:57576060-57575551 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 42

Conread position: 1-512
Cow position: chr1:63435101-63434585 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 75

Conread position: 1-512
Cow position: chr1:73960402-73960898 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 149

Conread position: 1-512
Cow position: chr1:82861475-82862021 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 356
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 140

Conread position: 1-512
Cow position: chr1:96184306-96183774 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 360
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 11, 124

Conread position: 1-513
Cow position: chr1:10778275-10778768 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 123

Conread position: 1-513
Cow position: chr1:39418416-39417917 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 125

Conread position: 1-513
Cow position: chr1:42874245-42873763 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 123

Conread position: 1-513
Cow position: chr1:48105734-48105211 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 126

Conread position: 1-513
Cow position: chr1:82880367-82880845 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 96

Conread position: 1-513
Cow position: chr1:91066446-91065943 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 119

Conread position: 1-513
Cow position: chr1:101713817-101714330 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 141

Conread position: 1-514
Cow position: chr1:15547171-15547680 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 122

Conread position: 1-514
Cow position: chr1:22728750-22729269 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 41

Conread position: 1-514
Cow position: chr1:31934215-31934719 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 125

Conread position: 1-514
Cow position: chr1:34159537-34160043 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 30

Conread position: 1-514
Cow position: chr1:42887559-42887065 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 50

Conread position: 1-514
Cow position: chr1:54199678-54199181 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 75

Conread position: 1-514
Cow position: chr1:77462068-77462554 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 8

Conread position: 1-514
Cow position: chr1:82504669-82505208 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 159

Conread position: 2-244
Cow position: chr1:69445077-69445310 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 11, 26

Conread position: 2-273
Cow position: chr1:73522439-73522171 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 67

Conread position: 2-289
Cow position: chr1:97422594-97422309 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 152

Conread position: 2-290
Cow position: chr1:41004664-41004369 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 93

Conread position: 2-325
Cow position: chr1:33811637-33811947 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 122

Conread position: 2-356
Cow position: chr1:68217657-68217313 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 8, 124

Conread position: 2-357
Cow position: chr1:52329824-52329469 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 49

Conread position: 2-378
Cow position: chr1:54596972-54596602 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 123

Conread position: 2-391
Cow position: chr1:92433724-92434083 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 272
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 122, 62

Conread position: 2-415
Cow position: chr1:21934476-21934066 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 279
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 71, 28

Conread position: 2-415
Cow position: chr1:26702494-26702100 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 36

Conread position: 2-427
Cow position: chr1:58889592-58889177 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 284
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 122

Conread position: 2-429
Cow position: chr1:70380452-70380022 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 298
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 8, 133

Conread position: 2-437
Cow position: chr1:100800060-100800480 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 75

Conread position: 2-439
Cow position: chr1:80336547-80336117 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 225

Conread position: 2-447
Cow position: chr1:74822153-74822592 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 225

Conread position: 2-450
Cow position: chr1:66430004-66430434 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 86

Conread position: 2-475
Cow position: chr1:11728896-11729345 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 61

Conread position: 2-493
Cow position: chr1:19145227-19144741 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 133

Conread position: 2-499
Cow position: chr1:55357577-55357089 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 40

Conread position: 2-507
Cow position: chr1:100450489-100449984 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 341
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 10, 129

Conread position: 2-511
Cow position: chr1:100551665-100552178 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 130

Conread position: 2-512
Cow position: chr1:35162107-35162618 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 137

Conread position: 2-512
Cow position: chr1:35170040-35170521 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 348
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 10, 122

Conread position: 2-512
Cow position: chr1:101551160-101551661 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 138

Conread position: 2-514
Cow position: chr1:12222902-12222389 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 119

Conread position: 2-514
Cow position: chr1:21787026-21787539 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 282

Conread position: 2-514
Cow position: chr1:68845777-68845291 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 30

Conread position: 3-278
Cow position: chr1:3720722-3720449 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 7, 36

Conread position: 3-347
Cow position: chr1:22448880-22448542 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 73

Conread position: 3-475
Cow position: chr1:102756717-102756261 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 316
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 9, 116

Conread position: 3-511
Cow position: chr1:26896120-26895599 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 120

Conread position: 4-278
Cow position: chr1:34000611-34000895 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 4-378
Cow position: chr1:21508097-21508463 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 262
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 54

Conread position: 4-512
Cow position: chr1:43352943-43352439 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 63

Conread position: 5-251
Cow position: chr1:94425688-94425927 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 30

Conread position: 6-465
Cow position: chr1:13637954-13637509 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 318
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 66, 18

Conread position: 7-213
Cow position: chr1:92198482-92198686 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 43

Conread position: 7-278
Cow position: chr1:77099831-77099569 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 71, 119

Conread position: 7-323
Cow position: chr1:71946661-71946355 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 113

Conread position: 7-378
Cow position: chr1:96487888-96488254 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 243
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 71, 117

Conread position: 7-439
Cow position: chr1:36613566-36613130 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 116

Conread position: 7-443
Cow position: chr1:100771025-100770597 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 306
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 170, 24

Conread position: 7-501
Cow position: chr1:71045460-71045937 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 116

Conread position: 7-504
Cow position: chr1:32341497-32341010 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 10

Conread position: 7-510
Cow position: chr1:69695297-69694796 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 21

Conread position: 8-246
Cow position: chr1:24528887-24528660 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 8-277
Cow position: chr1:80869816-80870096 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 64, 0

Conread position: 8-279
Cow position: chr1:53397694-53397968 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 67, 214

Conread position: 8-436
Cow position: chr1:3790344-3789942 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 287
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 63, 29

Conread position: 8-462
Cow position: chr1:52039347-52039794 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 114

Conread position: 8-504
Cow position: chr1:64678410-64678885 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 22

Conread position: 8-508
Cow position: chr1:93499332-93499828 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 131

Conread position: 8-510
Cow position: chr1:22826877-22827356 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 19

Conread position: 8-511
Cow position: chr1:22730472-22730945 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 40

Conread position: 8-514
Cow position: chr1:69539407-69539900 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 103

Conread position: 9-245
Cow position: chr1:2055162-2054925 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 68, 22

Conread position: 9-277
Cow position: chr1:9444129-9443869 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 115, 43

Conread position: 9-368
Cow position: chr1:61724312-61723959 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 11

Conread position: 9-427
Cow position: chr1:100705845-100706245 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 41

Conread position: 9-440
Cow position: chr1:3167355-3166944 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 289
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 29, 48

Conread position: 9-460
Cow position: chr1:36874729-36875180 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 21

Conread position: 9-496
Cow position: chr1:97755237-97755698 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 318
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 242, 48

Conread position: 9-509
Cow position: chr1:53520623-53521115 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 35

Conread position: 9-511
Cow position: chr1:81228620-81228123 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 66

Conread position: 10-203
Cow position: chr1:67577777-67577974 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 133

Conread position: 10-204
Cow position: chr1:1760156-1760355 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 68, 129

Conread position: 10-210
Cow position: chr1:51983308-51983496 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 10-221
Cow position: chr1:57957146-57956932 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 129

Conread position: 10-244
Cow position: chr1:43893640-43893871 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 65

Conread position: 10-245
Cow position: chr1:57305543-57305778 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 37, 132

Conread position: 10-263
Cow position: chr1:23969323-23969071 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 39

Conread position: 10-268
Cow position: chr1:3752231-3751967 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 70, 112

Conread position: 10-268
Cow position: chr1:11873643-11873390 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 236, 59

Conread position: 10-268
Cow position: chr1:79663952-79663697 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 78, 30

Conread position: 10-269
Cow position: chr1:1053300-1053563 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 70, 138

Conread position: 10-277
Cow position: chr1:50634703-50634420 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 123

Conread position: 10-278
Cow position: chr1:44164792-44165063 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 114, 27

Conread position: 10-283
Cow position: chr1:3456584-3456858 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 201
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 70, 109

Conread position: 10-284
Cow position: chr1:23488798-23488517 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 20

Conread position: 10-298
Cow position: chr1:72304658-72304372 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 21

Conread position: 10-317
Cow position: chr1:5873261-5872958 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 111

Conread position: 10-323
Cow position: chr1:3340642-3340953 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 17, 216

Conread position: 10-336
Cow position: chr1:78783258-78783576 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 113

Conread position: 10-351
Cow position: chr1:4573245-4573572 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 64, 31

Conread position: 10-376
Cow position: chr1:1991718-1991350 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 134

Conread position: 10-378
Cow position: chr1:25178032-25177670 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 248
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 68, 114

Conread position: 10-378
Cow position: chr1:33547427-33547069 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 131

Conread position: 10-378
Cow position: chr1:84282773-84283143 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 70, 117

Conread position: 10-386
Cow position: chr1:55135555-55135914 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 31

Conread position: 10-403
Cow position: chr1:4374626-4374242 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 113

Conread position: 10-407
Cow position: chr1:90640737-90641127 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 267

Conread position: 10-413
Cow position: chr1:45289159-45288766 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 38

Conread position: 10-414
Cow position: chr1:7350250-7350654 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 129

Conread position: 10-415
Cow position: chr1:20204737-20205134 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 114

Conread position: 10-423
Cow position: chr1:37309796-37309404 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 63

Conread position: 10-424
Cow position: chr1:53495174-53495577 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 130

Conread position: 10-426
Cow position: chr1:53458417-53458813 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 115

Conread position: 10-438
Cow position: chr1:89742300-89741865 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 254

Conread position: 10-439
Cow position: chr1:34300836-34300418 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 109

Conread position: 10-439
Cow position: chr1:94226836-94226424 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 113

Conread position: 10-440
Cow position: chr1:48731112-48730701 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 30

Conread position: 10-440
Cow position: chr1:53308680-53308262 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 110

Conread position: 10-440
Cow position: chr1:67821506-67821055 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 305
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 36, 121

Conread position: 10-440
Cow position: chr1:81913437-81913023 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 16

Conread position: 10-444
Cow position: chr1:49795712-49796125 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 183

Conread position: 10-451
Cow position: chr1:20950408-20950859 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 292
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 23

Conread position: 10-457
Cow position: chr1:89342277-89341833 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 56

Conread position: 10-475
Cow position: chr1:31348720-31348261 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 21

Conread position: 10-495
Cow position: chr1:90868726-90868262 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 115

Conread position: 10-502
Cow position: chr1:81613097-81613581 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 129

Conread position: 10-505
Cow position: chr1:81290233-81290710 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 20

Conread position: 10-505
Cow position: chr1:95100674-95101157 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 85

Conread position: 10-506
Cow position: chr1:25383374-25383876 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 20

Conread position: 10-509
Cow position: chr1:3323566-3324084 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 10-512
Cow position: chr1:61392081-61391583 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 101

Conread position: 10-512
Cow position: chr1:78091744-78092253 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 344
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 53, 117

Conread position: 10-513
Cow position: chr1:95176647-95177132 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 243

Conread position: 10-514
Cow position: chr1:21678855-21679359 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 328
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 70, 36

Conread position: 10-514
Cow position: chr1:26688766-26688276 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 21

Conread position: 10-514
Cow position: chr1:41696773-41697269 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 38

Conread position: 11-377
Cow position: chr1:71751548-71751191 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 241
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 122, 74

Conread position: 11-493
Cow position: chr1:60986682-60987186 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 333
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 29, 158

Conread position: 11-508
Cow position: chr1:2075614-2075141 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 325
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 62, 13

Conread position: 12-263
Cow position: chr1:53595039-53595287 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 100

Conread position: 12-278
Cow position: chr1:5409897-5409631 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 18

Conread position: 12-278
Cow position: chr1:98562874-98563146 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 94

Conread position: 12-286
Cow position: chr1:22467642-22467921 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 24, 129

Conread position: 12-367
Cow position: chr1:83082719-83083067 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 12-427
Cow position: chr1:3657652-3657247 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 273
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 60, 15

Conread position: 12-427
Cow position: chr1:31499341-31499744 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 112

Conread position: 12-440
Cow position: chr1:83747647-83748073 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 104

Conread position: 12-492
Cow position: chr1:80764823-80764361 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 327
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 25, 20

Conread position: 12-507
Cow position: chr1:46218295-46218758 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 114

Conread position: 12-507
Cow position: chr1:84812222-84811733 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 12

Conread position: 12-511
Cow position: chr1:18937119-18936624 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 41

Conread position: 12-514
Cow position: chr1:8336-8834 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 129

Conread position: 12-514
Cow position: chr1:30066351-30066816 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 339
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 38, 102

Conread position: 13-213
Cow position: chr1:48083269-48083471 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 67, 112

Conread position: 13-443
Cow position: chr1:4027576-4027999 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 126

Conread position: 13-470
Cow position: chr1:69264537-69264970 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 109

Conread position: 13-514
Cow position: chr1:82936867-82936390 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 110

Conread position: 14-508
Cow position: chr1:1981396-1980901 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 111

Conread position: 15-368
Cow position: chr1:60907078-60907437 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 271

Conread position: 16-314
Cow position: chr1:101547324-101547017 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 115, 124

Conread position: 16-378
Cow position: chr1:634909-635264 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 54, 123

Conread position: 16-446
Cow position: chr1:44769391-44768973 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 32

Conread position: 16-492
Cow position: chr1:72286331-72285878 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 441, 106

Conread position: 16-507
Cow position: chr1:82378514-82378980 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 15

Conread position: 16-511
Cow position: chr1:52434986-52435488 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 125

Conread position: 16-514
Cow position: chr1:1956612-1956123 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 109

Conread position: 17-266
Cow position: chr1:14561232-14560974 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 18-159
Cow position: chr1:26934817-26934679 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 48

Conread position: 18-190
Cow position: chr1:90297882-90298059 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 18-266
Cow position: chr1:98708163-98708410 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 31, 16

Conread position: 18-267
Cow position: chr1:67009013-67008773 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 49

Conread position: 18-493
Cow position: chr1:101634421-101634893 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 105

Conread position: 19-367
Cow position: chr1:70796372-70796033 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 222
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 119

Conread position: 19-514
Cow position: chr1:40599773-40600240 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 59

Conread position: 20-252
Cow position: chr1:19545380-19545145 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 26, 12

Conread position: 20-488
Cow position: chr1:99642649-99642180 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 268

Conread position: 20-511
Cow position: chr1:97954726-97954271 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 327
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 459, 107

Conread position: 21-282
Cow position: chr1:101007892-101007633 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 84

Conread position: 21-344
Cow position: chr1:71779048-71779373 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 221
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 75, 64

Conread position: 21-506
Cow position: chr1:33719837-33720311 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 117

Conread position: 22-247
Cow position: chr1:84786495-84786724 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 111, 116

Conread position: 22-261
Cow position: chr1:39702558-39702785 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 39

Conread position: 22-509
Cow position: chr1:38278324-38277815 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 121

Conread position: 22-509
Cow position: chr1:99609090-99609577 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 17

Conread position: 23-240
Cow position: chr1:55686494-55686275 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 110, 69

Conread position: 23-265
Cow position: chr1:99638055-99637810 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 116

Conread position: 23-278
Cow position: chr1:32631195-32631442 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 145, 43

Conread position: 24-336
Cow position: chr1:1403744-1403453 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 59

Conread position: 24-508
Cow position: chr1:89510206-89509722 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 114

Conread position: 24-514
Cow position: chr1:21954493-21954013 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 100

Conread position: 25-505
Cow position: chr1:20001022-20000550 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 103

Conread position: 25-506
Cow position: chr1:45020077-45019600 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 97

Conread position: 25-510
Cow position: chr1:53369798-53370295 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 340
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 55, 6

Conread position: 26-427
Cow position: chr1:84240628-84240999 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 96

Conread position: 26-439
Cow position: chr1:4032364-4032763 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 9

Conread position: 26-507
Cow position: chr1:16855960-16855493 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 62

Conread position: 27-440
Cow position: chr1:33997183-33996792 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 284
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 51, 112

Conread position: 28-427
Cow position: chr1:73196510-73196110 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 267
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 107

Conread position: 28-509
Cow position: chr1:20099088-20099557 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 326
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 49, 101

Conread position: 28-514
Cow position: chr1:61742238-61741749 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 96

Conread position: 29-277
Cow position: chr1:99095096-99095344 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 19

Conread position: 31-186
Cow position: chr1:49181787-49181946 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 93

Conread position: 31-440
Cow position: chr1:56711883-56711469 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 6

Conread position: 31-505
Cow position: chr1:51394151-51394624 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 193

Conread position: 32-205
Cow position: chr1:54484801-54484976 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 5, 107

Conread position: 32-277
Cow position: chr1:24655693-24655941 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 5, 91

Conread position: 32-302
Cow position: chr1:77657799-77658070 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 5, 130

Conread position: 32-435
Cow position: chr1:52994757-52995153 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 109

Conread position: 32-512
Cow position: chr1:39427248-39426804 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 91

Conread position: 33-509
Cow position: chr1:78810770-78811248 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 108

Conread position: 35-236
Cow position: chr1:52488221-52488023 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 124, 40

Conread position: 37-246
Cow position: chr1:64160079-64160288 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 8, 86

Conread position: 37-266
Cow position: chr1:95327414-95327181 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 37, 188

Conread position: 37-279
Cow position: chr1:84116141-84116379 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 96, 83

Conread position: 37-313
Cow position: chr1:4619131-4618844 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 204
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 87

Conread position: 37-400
Cow position: chr1:55146538-55146890 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 104

Conread position: 37-419
Cow position: chr1:10064238-10063870 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 256
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 14

Conread position: 37-419
Cow position: chr1:80899847-80900230 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 87, 104

Conread position: 37-501
Cow position: chr1:82338046-82337578 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 68

Conread position: 37-507
Cow position: chr1:71295569-71295096 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 41

Conread position: 38-310
Cow position: chr1:20799608-20799900 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 188

Conread position: 38-482
Cow position: chr1:4290898-4291335 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 22

Conread position: 38-512
Cow position: chr1:31390844-31390398 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 324
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 29

Conread position: 38-513
Cow position: chr1:102350018-102349547 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 87

Conread position: 39-514
Cow position: chr1:29935640-29935176 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 151

Conread position: 41-268
Cow position: chr1:3776871-3776646 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 83

Conread position: 41-268
Cow position: chr1:57637115-57637337 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 98

Conread position: 41-278
Cow position: chr1:94403959-94404194 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 40, 82

Conread position: 41-279
Cow position: chr1:33701863-33702101 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 79

Conread position: 41-279
Cow position: chr1:42728240-42728004 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 128, 14

Conread position: 41-378
Cow position: chr1:90864557-90864223 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 98

Conread position: 41-391
Cow position: chr1:91800865-91800517 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 100

Conread position: 41-426
Cow position: chr1:30413328-30413708 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 253
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 85

Conread position: 41-467
Cow position: chr1:85162804-85162383 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 289
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 92, 97

Conread position: 41-499
Cow position: chr1:42555013-42555443 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 82

Conread position: 41-500
Cow position: chr1:16767342-16766885 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 318
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 101

Conread position: 41-504
Cow position: chr1:12871264-12870805 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 75

Conread position: 41-507
Cow position: chr1:13413770-13414230 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 97

Conread position: 41-510
Cow position: chr1:79165349-79164871 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 238

Conread position: 43-201
Cow position: chr1:52510498-52510340 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 123

Conread position: 43-234
Cow position: chr1:3757697-3757892 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 81

Conread position: 43-262
Cow position: chr1:97806537-97806754 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 65

Conread position: 43-266
Cow position: chr1:37646256-37646032 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 32, 82

Conread position: 43-287
Cow position: chr1:97620095-97619846 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 80

Conread position: 43-381
Cow position: chr1:45535447-45535781 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 95

Conread position: 43-400
Cow position: chr1:6939894-6939544 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 80

Conread position: 43-438
Cow position: chr1:38401554-38401929 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 257
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 208, 54

Conread position: 43-461
Cow position: chr1:39069206-39068805 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 43-492
Cow position: chr1:34856884-34856432 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 80

Conread position: 43-507
Cow position: chr1:68827160-68826716 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 79

Conread position: 43-508
Cow position: chr1:61884660-61885121 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 182

Conread position: 43-514
Cow position: chr1:45555107-45555580 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 33

Conread position: 44-242
Cow position: chr1:99118131-99118333 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 29, 95

Conread position: 44-268
Cow position: chr1:13455889-13456111 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 195

Conread position: 44-279
Cow position: chr1:57247182-57247416 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 81

Conread position: 44-285
Cow position: chr1:86614612-86614848 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 32

Conread position: 44-325
Cow position: chr1:68782900-68782619 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 98, 32

Conread position: 44-328
Cow position: chr1:29901211-29900945 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 36, 84

Conread position: 44-351
Cow position: chr1:57635213-57635505 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 207, 78

Conread position: 44-371
Cow position: chr1:57639774-57639452 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 133, 144

Conread position: 44-413
Cow position: chr1:85774205-85774562 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 26, 68

Conread position: 44-414
Cow position: chr1:81868981-81868623 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 105

Conread position: 44-418
Cow position: chr1:2765163-2765523 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 242
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 171, 76

Conread position: 44-422
Cow position: chr1:37707223-37706863 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 268
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 43, 95

Conread position: 44-427
Cow position: chr1:44125891-44125519 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 31

Conread position: 44-432
Cow position: chr1:93810189-93810553 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 25

Conread position: 44-435
Cow position: chr1:72141310-72141699 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 282
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 36, 80

Conread position: 44-485
Cow position: chr1:6958625-6959065 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 78

Conread position: 44-492
Cow position: chr1:6941212-6941659 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 78

Conread position: 44-492
Cow position: chr1:100741043-100741475 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 317
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 207, 31

Conread position: 44-494
Cow position: chr1:95765343-95764917 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 311
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 43, 80

Conread position: 44-506
Cow position: chr1:57264240-57263786 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 79

Conread position: 44-507
Cow position: chr1:54478068-54478524 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 81

Conread position: 44-508
Cow position: chr1:70534188-70533753 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 320
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 68

Conread position: 44-509
Cow position: chr1:37322260-37321800 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 83

Conread position: 44-510
Cow position: chr1:64302486-64302039 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 19

Conread position: 44-510
Cow position: chr1:75744606-75745071 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 76

Conread position: 44-511
Cow position: chr1:65103381-65103842 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 326
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 26, 80

Conread position: 44-511
Cow position: chr1:96713068-96712608 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 281
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 36, 123

Conread position: 44-514
Cow position: chr1:197256-196791 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 39

Conread position: 44-514
Cow position: chr1:31348162-31347718 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 317
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 150, 30

Conread position: 44-514
Cow position: chr1:74084443-74083973 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 31

Conread position: 45-246
Cow position: chr1:31899784-31899584 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 51

Conread position: 45-337
Cow position: chr1:11770546-11770263 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 104, 77

Conread position: 45-379
Cow position: chr1:95035607-95035281 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 88, 29

Conread position: 45-439
Cow position: chr1:5135944-5135580 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 266
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 119, 77

Conread position: 45-440
Cow position: chr1:36931906-36932285 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 76

Conread position: 45-513
Cow position: chr1:50931222-50930766 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 93

Conread position: 46-205
Cow position: chr1:3872599-3872758 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 78

Conread position: 46-246
Cow position: chr1:61246403-61246211 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 46-274
Cow position: chr1:14379782-14379559 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 67

Conread position: 46-276
Cow position: chr1:81363742-81363970 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 146, 30

Conread position: 46-415
Cow position: chr1:64251301-64250946 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 29

Conread position: 46-438
Cow position: chr1:42360014-42360418 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 240

Conread position: 46-509
Cow position: chr1:74947369-74946929 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 322
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 62

Conread position: 46-511
Cow position: chr1:76470407-76470869 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 77

Conread position: 46-512
Cow position: chr1:19482326-19481887 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 78

Conread position: 46-514
Cow position: chr1:68818048-68817586 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 30

Conread position: 47-262
Cow position: chr1:89395340-89395567 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 79

Conread position: 47-279
Cow position: chr1:49131373-49131132 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 92

Conread position: 47-279
Cow position: chr1:75967185-75967414 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 76

Conread position: 47-400
Cow position: chr1:5023991-5023670 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 79

Conread position: 47-437
Cow position: chr1:71253806-71253427 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 27, 92

Conread position: 47-439
Cow position: chr1:28176749-28177135 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 273
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 120, 234

Conread position: 47-440
Cow position: chr1:47233726-47233346 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 76

Conread position: 47-440
Cow position: chr1:57900992-57900592 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 78

Conread position: 47-469
Cow position: chr1:24534494-24534093 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 77

Conread position: 47-504
Cow position: chr1:7442732-7443187 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 310
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 93

Conread position: 47-510
Cow position: chr1:3924045-3923593 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 70

Conread position: 47-510
Cow position: chr1:21835697-21836172 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 71

Conread position: 47-512
Cow position: chr1:43505272-43505737 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 91

Conread position: 48-201
Cow position: chr1:94378782-94378935 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 32, 76

Conread position: 48-218
Cow position: chr1:95071736-95071904 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 86, 90

Conread position: 48-274
Cow position: chr1:50679536-50679305 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 91

Conread position: 48-412
Cow position: chr1:81563483-81563849 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 56

Conread position: 48-440
Cow position: chr1:7143099-7142720 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 262
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 76

Conread position: 48-506
Cow position: chr1:42138615-42139046 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 308
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 29, 92

Conread position: 48-511
Cow position: chr1:10632803-10633252 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 91

Conread position: 48-512
Cow position: chr1:34685945-34686379 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 74

Conread position: 48-512
Cow position: chr1:78791557-78791114 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 317
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 77

Conread position: 49-246
Cow position: chr1:44136711-44136518 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 21, 74

Conread position: 49-508
Cow position: chr1:68619186-68618731 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 49

Conread position: 49-509
Cow position: chr1:25793689-25793248 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 318
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 30, 178

Conread position: 49-512
Cow position: chr1:92197211-92197667 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 318
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 23, 176

Conread position: 50-269
Cow position: chr1:57396177-57395957 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 75

Conread position: 50-303
Cow position: chr1:29671772-29671519 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 30, 89

Conread position: 50-392
Cow position: chr1:68951384-68951709 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 11

Conread position: 50-394
Cow position: chr1:89485343-89485666 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 26

Conread position: 50-488
Cow position: chr1:93528442-93528883 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 89

Conread position: 50-508
Cow position: chr1:78857570-78857117 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 72

Conread position: 50-511
Cow position: chr1:31414206-31413772 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 322
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 116, 69

Conread position: 50-514
Cow position: chr1:70538355-70538821 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 89

Conread position: 51-337
Cow position: chr1:3244603-3244879 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 36, 73

Conread position: 51-506
Cow position: chr1:56477348-56477792 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 68

Conread position: 52-242
Cow position: chr1:51531527-51531711 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 28, 75

Conread position: 52-278
Cow position: chr1:63905720-63905490 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 85

Conread position: 52-432
Cow position: chr1:98594325-98594689 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 70

Conread position: 52-467
Cow position: chr1:92369470-92369896 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 228

Conread position: 52-514
Cow position: chr1:93110871-93110417 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 90

Conread position: 53-439
Cow position: chr1:84239352-84238992 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 71

Conread position: 53-440
Cow position: chr1:6077649-6078025 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 268
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 27, 86

Conread position: 53-506
Cow position: chr1:44506722-44507175 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 43

Conread position: 53-514
Cow position: chr1:71119266-71119736 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 70

Conread position: 54-320
Cow position: chr1:3035237-3034973 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 19, 71

Conread position: 54-426
Cow position: chr1:88618348-88618714 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 86

Conread position: 54-511
Cow position: chr1:19465818-19466248 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 66

Conread position: 55-440
Cow position: chr1:3962927-3962554 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 68

Conread position: 56-514
Cow position: chr1:95056813-95057245 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 64

Conread position: 57-429
Cow position: chr1:62732334-62732691 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 245
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 82

Conread position: 58-288
Cow position: chr1:20287877-20288111 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 17

Conread position: 58-347
Cow position: chr1:31235174-31234892 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 16, 83

Conread position: 58-424
Cow position: chr1:30504231-30504617 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 80

Conread position: 58-490
Cow position: chr1:71079193-71078771 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 300
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 75, 27

Conread position: 58-504
Cow position: chr1:51445639-51446088 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 81

Conread position: 58-507
Cow position: chr1:54732697-54732249 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 299
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 9

Conread position: 58-512
Cow position: chr1:70434752-70435199 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 191

Conread position: 58-513
Cow position: chr1:25281916-25281463 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 59-393
Cow position: chr1:26729489-26729798 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 79

Conread position: 59-427
Cow position: chr1:40531348-40530984 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 35

Conread position: 59-513
Cow position: chr1:101834601-101835030 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 308
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 362, 19

Conread position: 60-216
Cow position: chr1:65637966-65638127 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 61-278
Cow position: chr1:71818699-71818477 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 215

Conread position: 61-337
Cow position: chr1:100512359-100512638 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 128, 98

Conread position: 62-513
Cow position: chr1:102784724-102785161 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 310
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 77

Conread position: 63-273
Cow position: chr1:25886310-25886102 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 17, 61

Conread position: 63-278
Cow position: chr1:10655243-10655465 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 106, 216

Conread position: 63-278
Cow position: chr1:49839271-49839487 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 12, 61

Conread position: 63-303
Cow position: chr1:51818706-51818945 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 20, 60

Conread position: 63-504
Cow position: chr1:69678561-69678118 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 307
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 9, 156

Conread position: 63-508
Cow position: chr1:65318344-65318787 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 78

Conread position: 63-514
Cow position: chr1:55229749-55230188 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 304
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 17, 60

Conread position: 64-218
Cow position: chr1:99543283-99543129 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 60

Conread position: 64-504
Cow position: chr1:70227936-70227486 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 297
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 61

Conread position: 65-509
Cow position: chr1:10942325-10941887 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 74

Conread position: 65-509
Cow position: chr1:10964061-10964499 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 74

Conread position: 65-512
Cow position: chr1:97611886-97611460 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 105

Conread position: 66-492
Cow position: chr1:43389280-43388861 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 57

Conread position: 66-510
Cow position: chr1:15333650-15334100 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 10

Conread position: 67-204
Cow position: chr1:53650659-53650800 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 67-379
Cow position: chr1:43358245-43357940 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 57, 71

Conread position: 67-427
Cow position: chr1:78809652-78809995 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 56

Conread position: 68-256
Cow position: chr1:86484727-86484925 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 10

Conread position: 68-378
Cow position: chr1:3429738-3429439 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 26, 55

Conread position: 68-389
Cow position: chr1:24729069-24728759 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 57

Conread position: 68-501
Cow position: chr1:92010084-92010499 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 285
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 55

Conread position: 68-510
Cow position: chr1:52052933-52052522 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 51

Conread position: 69-382
Cow position: chr1:79278670-79278373 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 39

Conread position: 69-412
Cow position: chr1:56634870-56635202 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 54

Conread position: 69-429
Cow position: chr1:73761580-73761240 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 64, 69

Conread position: 69-505
Cow position: chr1:55705482-55705041 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 308
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 55, 69

Conread position: 69-505
Cow position: chr1:64804336-64803891 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 304
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 64, 69

Conread position: 70-274
Cow position: chr1:4293835-4294035 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 172, 53

Conread position: 70-285
Cow position: chr1:53540163-53540377 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 69

Conread position: 70-391
Cow position: chr1:7186560-7186871 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 184

Conread position: 70-500
Cow position: chr1:26200993-26201435 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 296
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 68

Conread position: 72-511
Cow position: chr1:87072479-87072907 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 297
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 356, 82

Conread position: 73-508
Cow position: chr1:96472205-96472625 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 72

Conread position: 74-489
Cow position: chr1:98030691-98031105 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 64

Conread position: 77-393
Cow position: chr1:98310840-98311157 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 202

Conread position: 77-440
Cow position: chr1:62036580-62036933 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 47, 61

Conread position: 78-353
Cow position: chr1:43448042-43447784 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 156, 45

Conread position: 78-487
Cow position: chr1:49433484-49433075 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 141

Conread position: 79-332
Cow position: chr1:45673493-45673740 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 34

Conread position: 79-440
Cow position: chr1:52956041-52956383 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 172, 44

Conread position: 79-452
Cow position: chr1:93043807-93044161 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 45, 59

Conread position: 79-501
Cow position: chr1:69415936-69415527 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 285
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 88, 195

Conread position: 79-505
Cow position: chr1:7971212-7971610 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 294
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 172, 43

Conread position: 79-511
Cow position: chr1:49317731-49317289 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 301
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 42, 208

Conread position: 79-513
Cow position: chr1:14981337-14980924 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 299
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 74, 48

Conread position: 79-513
Cow position: chr1:70422082-70422516 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 276
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 59

Conread position: 79-514
Cow position: chr1:6305087-6304662 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 58

Conread position: 81-427
Cow position: chr1:75933053-75933385 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 76, 15

Conread position: 81-446
Cow position: chr1:98461074-98461424 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 57

Conread position: 81-509
Cow position: chr1:34771720-34771289 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 42

Conread position: 83-506
Cow position: chr1:42175505-42175935 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 289
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 55, 19

Conread position: 84-499
Cow position: chr1:19885171-19885567 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 54

Conread position: 84-507
Cow position: chr1:74956237-74955824 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 40

Conread position: 85-506
Cow position: chr1:27145866-27145437 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 294
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 83, 191

Conread position: 88-269
Cow position: chr1:62291895-62291716 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 167, 33

Conread position: 88-378
Cow position: chr1:95654925-95654643 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 52

Conread position: 88-439
Cow position: chr1:90976292-90975956 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 108, 34

Conread position: 88-500
Cow position: chr1:75382782-75383164 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 291
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 50

Conread position: 88-508
Cow position: chr1:68862826-68863228 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 44

Conread position: 89-456
Cow position: chr1:100393373-100393012 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 51

Conread position: 89-509
Cow position: chr1:21955582-21955162 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 284
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 52

Conread position: 92-437
Cow position: chr1:94261342-94261664 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 102, 31

Conread position: 93-415
Cow position: chr1:75141802-75142104 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 101, 31

Conread position: 93-415
Cow position: chr1:101867151-101867456 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 210
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 128, 29

Conread position: 94-378
Cow position: chr1:72103643-72103920 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 75

Conread position: 95-361
Cow position: chr1:70028375-70028633 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 29

Conread position: 95-389
Cow position: chr1:69127370-69127085 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 44

Conread position: 95-396
Cow position: chr1:63138636-63138929 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 24

Conread position: 95-415
Cow position: chr1:4414410-4414102 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 27

Conread position: 95-508
Cow position: chr1:46030555-46030155 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 279
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 99, 27

Conread position: 95-510
Cow position: chr1:28563771-28563350 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 298
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 73, 27

Conread position: 96-512
Cow position: chr1:43340824-43340420 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 304
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 31, 27

Conread position: 98-337
Cow position: chr1:81470929-81471162 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 185

Conread position: 98-504
Cow position: chr1:24542781-24542365 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 24

Conread position: 98-508
Cow position: chr1:90621721-90621297 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 14

Conread position: 98-512
Cow position: chr1:84906267-84905847 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 277
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 40

Conread position: 99-378
Cow position: chr1:51654212-51654494 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 20

Conread position: 100-427
Cow position: chr1:43872532-43872201 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 38

Conread position: 102-394
Cow position: chr1:6788485-6788197 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 39

Conread position: 103-374
Cow position: chr1:82443651-82443389 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 21

Conread position: 103-454
Cow position: chr1:32001515-32001169 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 63, 20

Conread position: 105-507
Cow position: chr1:83072251-83072648 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 280
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 63, 17

Conread position: 111-446
Cow position: chr1:97778808-97779129 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 27

Conread position: 112-389
Cow position: chr1:65905192-65904917 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 25

Conread position: 112-511
Cow position: chr1:101866689-101866286 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 269
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 26

Conread position: 113-505
Cow position: chr1:42545971-42545594 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 13

Conread position: 115-337
Cow position: chr1:51684616-51684836 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 34, 10

Conread position: 117-504
Cow position: chr1:76613311-76612927 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 262
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 9, 43

Conread position: 119-472
Cow position: chr1:57297296-57297652 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 79, 46

Conread position: 120-514
Cow position: chr1:20667923-20667535 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 92

Conread position: 122-368
Cow position: chr1:24445808-24445568 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 60

Conread position: 122-439
Cow position: chr1:101268183-101267873 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 74, 43

Conread position: 123-266
Cow position: chr1:27114489-27114631 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 128, 46

Conread position: 123-274
Cow position: chr1:69378928-69378768 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 123-278
Cow position: chr1:89082929-89083093 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 123-370
Cow position: chr1:24413261-24413511 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 22, 142

Conread position: 123-467
Cow position: chr1:86578770-86579117 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 22, 180

Conread position: 123-500
Cow position: chr1:9533997-9534343 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 262
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 42

Conread position: 123-500
Cow position: chr1:12464842-12464464 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 123-507
Cow position: chr1:68763860-68763476 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 77

Conread position: 123-510
Cow position: chr1:58825370-58825727 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 263
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 83

Conread position: 123-512
Cow position: chr1:24778157-24777771 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 277
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 31, 41

Conread position: 123-514
Cow position: chr1:33207053-33206659 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 293
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 70

Conread position: 124-499
Cow position: chr1:96081311-96081678 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 261
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 127, 35

Conread position: 124-514
Cow position: chr1:724557-724954 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 272
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 60

Conread position: 125-511
Cow position: chr1:96305144-96304761 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 117, 30

Conread position: 127-419
Cow position: chr1:12978507-12978793 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 10

Conread position: 128-511
Cow position: chr1:59518747-59519123 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 96

Conread position: 129-440
Cow position: chr1:77880903-77880599 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 34

Conread position: 129-509
Cow position: chr1:484638-484253 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 258
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 134

Conread position: 130-513
Cow position: chr1:51417605-51417979 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 252
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 121, 42

Conread position: 132-286
Cow position: chr1:101280885-101280732 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 120

Conread position: 132-425
Cow position: chr1:24876101-24876379 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 119, 5

Conread position: 132-427
Cow position: chr1:31608063-31607770 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 142

Conread position: 132-507
Cow position: chr1:20544127-20544475 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 261
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 5

Conread position: 132-511
Cow position: chr1:55429124-55428740 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 5

Conread position: 132-514
Cow position: chr1:16061188-16060793 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 280

Conread position: 132-514
Cow position: chr1:22525716-22526089 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 30

Conread position: 132-514
Cow position: chr1:87095399-87094996 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 5

Conread position: 132-514
Cow position: chr1:101632508-101632137 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 266
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 27, 143

Conread position: 135-450
Cow position: chr1:77683191-77683492 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 33, 140

Conread position: 137-400
Cow position: chr1:43703244-43703501 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 31, 7

Conread position: 137-427
Cow position: chr1:75347456-75347743 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 24, 137

Conread position: 137-438
Cow position: chr1:74927716-74928014 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 91

Conread position: 137-447
Cow position: chr1:67305405-67305104 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 32, 76

Conread position: 137-492
Cow position: chr1:24581419-24581759 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 233
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 85

Conread position: 137-503
Cow position: chr1:38753753-38754121 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 141

Conread position: 137-508
Cow position: chr1:86110896-86110536 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 264
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 132

Conread position: 137-511
Cow position: chr1:42398357-42397983 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 252
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 55, 22

Conread position: 138-389
Cow position: chr1:14309197-14308951 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 21, 31

Conread position: 138-439
Cow position: chr1:97696577-97696875 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 30, 139

Conread position: 138-440
Cow position: chr1:93554680-93554968 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 87

Conread position: 139-435
Cow position: chr1:85647944-85647653 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 135

Conread position: 139-440
Cow position: chr1:3882627-3882327 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 144

Conread position: 139-514
Cow position: chr1:20581790-20582137 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 254
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 76, 20

Conread position: 140-399
Cow position: chr1:70026505-70026254 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 26, 133

Conread position: 141-506
Cow position: chr1:14206316-14205957 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 27, 84

Conread position: 142-421
Cow position: chr1:60281215-60281486 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 115, 23

Conread position: 142-427
Cow position: chr1:91811627-91811897 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 83

Conread position: 142-508
Cow position: chr1:88913162-88913529 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 257
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 109, 121

Conread position: 143-440
Cow position: chr1:98413608-98413904 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 93

Conread position: 144-382
Cow position: chr1:182651-182878 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 43

Conread position: 146-500
Cow position: chr1:65909371-65909745 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 243
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 130

Conread position: 147-512
Cow position: chr1:41115869-41115523 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 130

Conread position: 147-514
Cow position: chr1:23512809-23512462 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 21, 90

Conread position: 148-278
Cow position: chr1:85826193-85826324 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 100, 125

Conread position: 148-286
Cow position: chr1:73536588-73536731 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 17

Conread position: 148-438
Cow position: chr1:5579906-5580185 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 20, 43

Conread position: 148-482
Cow position: chr1:87197674-87198001 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 20, 76

Conread position: 148-508
Cow position: chr1:86682716-86682359 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 236
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 128

Conread position: 149-506
Cow position: chr1:22192611-22192977 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 111

Conread position: 150-269
Cow position: chr1:98397107-98396986 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 151-501
Cow position: chr1:89448750-89449100 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 242
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 100, 114

Conread position: 152-425
Cow position: chr1:30047740-30047486 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 154-502
Cow position: chr1:39225069-39224736 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 49

Conread position: 154-509
Cow position: chr1:91023615-91023258 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 242
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 121

Conread position: 156-514
Cow position: chr1:56618793-56618441 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 115

Conread position: 162-510
Cow position: chr1:78079591-78079934 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 20, 46

Conread position: 164-447
Cow position: chr1:85550212-85549937 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 87, 108

Conread position: 165-383
Cow position: chr1:7609482-7609694 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 105

Conread position: 165-385
Cow position: chr1:87440335-87440544 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 165-415
Cow position: chr1:70312938-70312684 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 190

Conread position: 165-427
Cow position: chr1:50045666-50045919 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 99

Conread position: 165-437
Cow position: chr1:18780467-18780200 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 160, 34

Conread position: 165-440
Cow position: chr1:41047433-41047170 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 20

Conread position: 165-454
Cow position: chr1:86073461-86073746 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 105

Conread position: 165-493
Cow position: chr1:47886622-47886286 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 138

Conread position: 165-493
Cow position: chr1:97090194-97090511 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 220
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 91, 56

Conread position: 165-508
Cow position: chr1:8129100-8128770 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 48

Conread position: 165-512
Cow position: chr1:92997032-92996672 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 108

Conread position: 165-514
Cow position: chr1:78838665-78839002 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 100

Conread position: 166-513
Cow position: chr1:101860621-101860273 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 233
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 98

Conread position: 166-514
Cow position: chr1:64572381-64572729 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 103

Conread position: 167-511
Cow position: chr1:72105282-72105613 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 84, 12

Conread position: 170-439
Cow position: chr1:100569023-100569287 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 103

Conread position: 171-490
Cow position: chr1:86340599-86340289 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 41

Conread position: 171-499
Cow position: chr1:79640417-79640089 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 216
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 80, 18

Conread position: 172-492
Cow position: chr1:72813486-72813810 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 17, 104

Conread position: 172-501
Cow position: chr1:31272567-31272253 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 97, 0

Conread position: 172-512
Cow position: chr1:30983617-30983279 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 238
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 7

Conread position: 174-505
Cow position: chr1:71666066-71665728 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 23, 106

Conread position: 176-509
Cow position: chr1:20104146-20104476 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 228
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 242, 72

Conread position: 176-514
Cow position: chr1:43311898-43311557 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 91

Conread position: 177-437
Cow position: chr1:78697893-78697643 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 21, 41

Conread position: 177-492
Cow position: chr1:17196751-17196432 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 71, 88

Conread position: 178-371
Cow position: chr1:8984805-8984619 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 92

Conread position: 179-440
Cow position: chr1:9437428-9437158 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 72, 134

Conread position: 179-511
Cow position: chr1:47790785-47790455 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 69, 93

Conread position: 182-510
Cow position: chr1:63530432-63530771 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 25

Conread position: 183-512
Cow position: chr1:22823791-22824122 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 69, 14

Conread position: 183-514
Cow position: chr1:42482087-42482415 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 223
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 81

Conread position: 189-422
Cow position: chr1:61543027-61542805 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 88

Conread position: 189-439
Cow position: chr1:7023011-7023252 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 189-440
Cow position: chr1:10716393-10716628 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 45

Conread position: 189-440
Cow position: chr1:45553353-45553111 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 94

Conread position: 189-501
Cow position: chr1:26427971-26427679 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 288, 37

Conread position: 189-511
Cow position: chr1:78794334-78794024 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 74

Conread position: 189-514
Cow position: chr1:43855192-43855504 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 62, 86

Conread position: 192-447
Cow position: chr1:48769696-48769942 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 19, 81

Conread position: 192-514
Cow position: chr1:65028423-65028733 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 211
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 15, 65

Conread position: 194-493
Cow position: chr1:49082637-49082940 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 234, 5

Conread position: 194-514
Cow position: chr1:24406998-24406698 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 57, 73

Conread position: 195-508
Cow position: chr1:5637179-5636863 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 242

Conread position: 195-513
Cow position: chr1:56225690-56225996 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 233, 26

Conread position: 195-514
Cow position: chr1:54156835-54156519 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 76

Conread position: 197-513
Cow position: chr1:42541495-42541805 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 73

Conread position: 198-504
Cow position: chr1:82513456-82513147 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 67

Conread position: 200-512
Cow position: chr1:6972431-6972723 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 54, 74

Conread position: 200-514
Cow position: chr1:6394453-6394772 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 202
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 234, 32

Conread position: 201-438
Cow position: chr1:98511831-98512056 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 50, 71

Conread position: 201-507
Cow position: chr1:30189049-30189365 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 50, 66

Conread position: 204-447
Cow position: chr1:71796408-71796170 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 194, 67

Conread position: 208-440
Cow position: chr1:50991844-50992066 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 69

Conread position: 208-504
Cow position: chr1:100576130-100575836 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 65

Conread position: 212-509
Cow position: chr1:100474145-100474449 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 39, 61

Conread position: 213-440
Cow position: chr1:95153134-95153354 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 51

Conread position: 214-440
Cow position: chr1:8347039-8347255 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 58

Conread position: 214-513
Cow position: chr1:90904838-90904543 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 199
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 215, 41

Conread position: 214-514
Cow position: chr1:3815775-3815471 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 38

Conread position: 215-427
Cow position: chr1:59147424-59147226 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 11

Conread position: 216-509
Cow position: chr1:49825152-49824856 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 49

Conread position: 219-440
Cow position: chr1:68672679-68672470 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 53

Conread position: 220-440
Cow position: chr1:81580091-81580309 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 31, 53

Conread position: 221-508
Cow position: chr1:102753775-102754059 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 30, 52

Conread position: 221-514
Cow position: chr1:186356-186066 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 208
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 8, 65

Conread position: 222-440
Cow position: chr1:48214238-48214026 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 43

Conread position: 222-461
Cow position: chr1:98575969-98576199 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 50

Conread position: 222-504
Cow position: chr1:89388261-89388548 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 188
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 74

Conread position: 222-504
Cow position: chr1:98583681-98583953 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 50

Conread position: 222-507
Cow position: chr1:52467225-52467493 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 33, 49

Conread position: 222-513
Cow position: chr1:43548134-43547855 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 6, 50

Conread position: 228-447
Cow position: chr1:58036948-58037157 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 43

Conread position: 229-437
Cow position: chr1:73936221-73936015 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 42

Conread position: 229-492
Cow position: chr1:45223510-45223769 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 22, 44

Conread position: 231-514
Cow position: chr1:46143530-46143252 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 44

Conread position: 233-440
Cow position: chr1:95072264-95072464 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 32

Conread position: 233-442
Cow position: chr1:43312094-43311897 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 235-504
Cow position: chr1:52662236-52661971 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 189, 34

Conread position: 235-507
Cow position: chr1:33998693-33998957 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 20, 43

Conread position: 236-503
Cow position: chr1:48206598-48206336 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 35

Conread position: 237-514
Cow position: chr1:500113-500391 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 205, 34

Conread position: 237-514
Cow position: chr1:101507296-101507565 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 37

Conread position: 238-513
Cow position: chr1:62235508-62235242 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 13, 35

Conread position: 239-440
Cow position: chr1:17317423-17317228 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 34

Conread position: 240-504
Cow position: chr1:79718742-79719013 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 43

Conread position: 242-440
Cow position: chr1:95974342-95974531 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 243-514
Cow position: chr1:77739664-77739939 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 182, 8

Conread position: 250-440
Cow position: chr1:84203466-84203643 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 257-506
Cow position: chr1:8287678-8287423 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 181, 14

Conread position: 260-503
Cow position: chr1:81858948-81858697 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 20

Conread position: 268-500
Cow position: chr1:97833673-97833898 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 208, 24

Conread position: 268-514
Cow position: chr1:67529017-67529271 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 160, 20

Conread position: 271-505
Cow position: chr1:52912933-52912686 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 157, 30

Conread position: 271-511
Cow position: chr1:95835831-95835582 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 162, 10

Conread position: 271-514
Cow position: chr1:62997763-62998016 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 158, 20

Conread position: 272-501
Cow position: chr1:83606489-83606254 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 9

Conread position: 272-511
Cow position: chr1:43286311-43286541 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 273-511
Cow position: chr1:81481419-81481170 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 275-508
Cow position: chr1:49980679-49980917 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 153, 13

Conread position: 276-514
Cow position: chr1:80584398-80584643 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 165, 134

Conread position: 277-440
Cow position: chr1:101177484-101177647 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 277-513
Cow position: chr1:73719428-73719685 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 281-500
Cow position: chr1:22035585-22035809 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 149, 20

Conread position: 283-440
Cow position: chr1:77232602-77232446 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 283-509
Cow position: chr1:73721336-73721574 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 118, 9

Conread position: 284-511
Cow position: chr1:72304411-72304190 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 285-514
Cow position: chr1:48618266-48618032 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 141, 27

Conread position: 289-440
Cow position: chr1:3417329-3417487 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 292-429
Cow position: chr1:98636689-98636823 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 133, 110

Conread position: 292-437
Cow position: chr1:45478875-45478734 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 292-437
Cow position: chr1:78068085-78067941 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 292-439
Cow position: chr1:71916135-71915989 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 292-440
Cow position: chr1:8670757-8670906 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 133, 0

Conread position: 292-440
Cow position: chr1:84768895-84768747 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 292-442
Cow position: chr1:43148564-43148411 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 11

Conread position: 292-467
Cow position: chr1:92684711-92684536 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 166

Conread position: 292-478
Cow position: chr1:69940839-69940647 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 136, 0

Conread position: 292-500
Cow position: chr1:95618626-95618842 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 136, 0

Conread position: 292-501
Cow position: chr1:2462367-2462573 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 175, 39

Conread position: 292-501
Cow position: chr1:63078994-63079203 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 149, 69

Conread position: 292-505
Cow position: chr1:88338651-88338856 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 181, 110

Conread position: 292-506
Cow position: chr1:242541-242759 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 136, 0

Conread position: 292-506
Cow position: chr1:7908021-7908232 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 119, 110

Conread position: 292-507
Cow position: chr1:45315652-45315423 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 147, 0

Conread position: 292-507
Cow position: chr1:55753231-55753011 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 136, 33

Conread position: 292-509
Cow position: chr1:88111859-88112068 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 164, 52

Conread position: 292-509
Cow position: chr1:102648262-102648490 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 146, 0

Conread position: 292-511
Cow position: chr1:852154-852386 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 126, 112

Conread position: 292-511
Cow position: chr1:49334408-49334179 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 120, 44

Conread position: 292-511
Cow position: chr1:73020678-73020449 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 128, 195

Conread position: 292-514
Cow position: chr1:6731165-6731394 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 20

Conread position: 292-514
Cow position: chr1:38706870-38706638 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 136, 0

Conread position: 292-514
Cow position: chr1:74081997-74081786 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 182, 135

Conread position: 293-438
Cow position: chr1:45874093-45873940 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 293-494
Cow position: chr1:61011166-61011370 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 146, 0

Conread position: 293-505
Cow position: chr1:68127205-68126984 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 162, 129

Conread position: 293-505
Cow position: chr1:88359863-88360091 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 293-509
Cow position: chr1:23969067-23968855 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 180, 19

Conread position: 293-509
Cow position: chr1:41027060-41027282 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 136, 50

Conread position: 293-510
Cow position: chr1:66752644-66752421 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 145, 0

Conread position: 293-514
Cow position: chr1:83917-84126 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 184, 44

Conread position: 293-514
Cow position: chr1:92075474-92075695 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 137, 88

Conread position: 295-509
Cow position: chr1:7793535-7793323 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 58

Conread position: 295-510
Cow position: chr1:95152858-95153086 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 131, 0

Conread position: 296-433
Cow position: chr1:21823350-21823488 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 296-440
Cow position: chr1:65881795-65881937 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 296-441
Cow position: chr1:54157282-54157429 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 296-500
Cow position: chr1:6381760-6381977 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 134, 94

Conread position: 296-500
Cow position: chr1:51968525-51968728 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 181, 0

Conread position: 296-503
Cow position: chr1:51860573-51860360 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 137, 0

Conread position: 296-506
Cow position: chr1:38205462-38205658 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 0

Conread position: 296-506
Cow position: chr1:102768168-102768382 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 57

Conread position: 296-509
Cow position: chr1:97144476-97144261 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 35

Conread position: 296-510
Cow position: chr1:100823026-100823251 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 132, 36

Conread position: 296-511
Cow position: chr1:72422420-72422193 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 132, 76

Conread position: 296-511
Cow position: chr1:96599301-96599092 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 41

Conread position: 296-514
Cow position: chr1:6854316-6854104 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 296-514
Cow position: chr1:31256234-31256013 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 24, 36

Conread position: 297-440
Cow position: chr1:19304561-19304702 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 297-440
Cow position: chr1:64019532-64019389 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 297-511
Cow position: chr1:96019219-96019441 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 42

Conread position: 298-509
Cow position: chr1:68688573-68688789 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 143, 0

Conread position: 298-513
Cow position: chr1:22461248-22461028 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 113, 106

Conread position: 300-456
Cow position: chr1:101280742-101280590 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 300-478
Cow position: chr1:89728612-89728439 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 135, 44

Conread position: 301-464
Cow position: chr1:56229231-56229393 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 100, 129

Conread position: 301-509
Cow position: chr1:78066544-78066333 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 127, 0

Conread position: 301-511
Cow position: chr1:41138151-41137935 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 302-505
Cow position: chr1:93590592-93590384 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 127, 181

Conread position: 302-514
Cow position: chr1:70416761-70416545 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 166
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 127, 19

Conread position: 303-507
Cow position: chr1:73551515-73551294 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 304-506
Cow position: chr1:100852705-100852909 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 159

Conread position: 306-514
Cow position: chr1:6836860-6836653 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 99, 16

Conread position: 307-505
Cow position: chr1:99605188-99604986 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 113, 175

Conread position: 307-514
Cow position: chr1:43499297-43499095 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 170, 95

Conread position: 308-497
Cow position: chr1:38055500-38055307 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 125, 14

Conread position: 308-511
Cow position: chr1:87220460-87220654 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 116, 52

Conread position: 311-508
Cow position: chr1:32014201-32014401 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 117, 15

Conread position: 311-514
Cow position: chr1:55685975-55685763 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 105, 0

Conread position: 312-467
Cow position: chr1:53540579-53540732 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 312-506
Cow position: chr1:4511987-4512177 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 112, 163

Conread position: 313-506
Cow position: chr1:87149810-87149609 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 314-438
Cow position: chr1:55194240-55194117 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 314-492
Cow position: chr1:78793997-78793810 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 314-510
Cow position: chr1:52450777-52450974 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 171

Conread position: 314-511
Cow position: chr1:100812285-100812088 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 39

Conread position: 314-513
Cow position: chr1:11709012-11708810 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 93, 129

Conread position: 315-439
Cow position: chr1:23055054-23055178 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 315-504
Cow position: chr1:63994548-63994350 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 82

Conread position: 315-511
Cow position: chr1:20537212-20537415 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 110, 0

Conread position: 316-514
Cow position: chr1:13828578-13828373 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 34

Conread position: 316-514
Cow position: chr1:70483326-70483120 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 105, 0

Conread position: 316-514
Cow position: chr1:91796219-91796026 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 161, 24

Conread position: 319-475
Cow position: chr1:81179337-81179173 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 155

Conread position: 319-509
Cow position: chr1:98557108-98556908 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 319-512
Cow position: chr1:25022064-25021865 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 319-513
Cow position: chr1:63460889-63461092 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 109, 0

Conread position: 321-511
Cow position: chr1:79663424-79663241 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 156, 7

Conread position: 322-510
Cow position: chr1:90595558-90595366 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 0

Conread position: 322-514
Cow position: chr1:15875674-15875875 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 323-506
Cow position: chr1:81638563-81638745 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 114, 155

Conread position: 323-508
Cow position: chr1:89298095-89297898 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 60

Conread position: 323-508
Cow position: chr1:89301704-89301507 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 60

Conread position: 323-514
Cow position: chr1:39684129-39683927 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 110, 70

Conread position: 327-507
Cow position: chr1:32035691-32035506 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 101, 156

Conread position: 327-514
Cow position: chr1:62469080-62469273 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 101, 28

Conread position: 328-505
Cow position: chr1:42353181-42353350 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 328-508
Cow position: chr1:5872759-5872565 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 330-511
Cow position: chr1:100800747-100800557 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 331-495
Cow position: chr1:71636300-71636132 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 73

Conread position: 331-496
Cow position: chr1:96362404-96362241 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 26, 93

Conread position: 331-510
Cow position: chr1:11770213-11770031 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 93, 0

Conread position: 332-508
Cow position: chr1:70044379-70044552 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 145, 11

Conread position: 333-505
Cow position: chr1:89835742-89835916 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 340-508
Cow position: chr1:25955927-25956105 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 340-510
Cow position: chr1:40077826-40078001 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 91, 131

Conread position: 340-514
Cow position: chr1:87934239-87934066 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 135, 111

Conread position: 342-509
Cow position: chr1:90820443-90820270 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 96, 13

Conread position: 342-514
Cow position: chr1:79170119-79169938 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 145

Conread position: 344-469
Cow position: chr1:45449338-45449465 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 344-469
Cow position: chr1:96932309-96932434 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 344-506
Cow position: chr1:91810782-91810943 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 115, 98

Conread position: 346-501
Cow position: chr1:92363625-92363468 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 96, 57

Conread position: 346-503
Cow position: chr1:82917437-82917279 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 133

Conread position: 346-504
Cow position: chr1:10470464-10470627 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 346-509
Cow position: chr1:63212221-63212048 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 45

Conread position: 346-514
Cow position: chr1:84787308-84787475 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 131, 83

Conread position: 348-514
Cow position: chr1:75227280-75227110 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 349-510
Cow position: chr1:40284598-40284438 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 128, 71

Conread position: 350-499
Cow position: chr1:85339426-85339577 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 350-509
Cow position: chr1:53474198-53474358 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 127, 32

Conread position: 358-512
Cow position: chr1:27114699-27114850 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 360-507
Cow position: chr1:81615706-81615858 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 107

Conread position: 365-514
Cow position: chr1:39095545-39095700 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 119

Conread position: 370-506
Cow position: chr1:54294453-54294314 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 85

Conread position: 376-505
Cow position: chr1:45233059-45233189 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 41

Show alignments to all cow chromosomes.