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Cow genome map

           
Conread name:
           
mE6-MI-P-E6-acx-c-02-1-UM.s1
        

               
Conread position:
               
1-168
               

               
Cow position:
               
chr19:13755575-13755744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 138
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr19:39254818-39254629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 142
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr19:37502972-37502786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr19:34654891-34654670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr19:42762770-42762987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 126
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr19:46693834-46694054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr19:53463484-53463251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
9, 190
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr19:24956744-24956517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr19:1580896-1580651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr19:11066124-11065852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 119
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr19:4195413-4195681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 119
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr19:10786675-10786414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 125
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr19:31378931-31378646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
11, 145
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr19:54294899-54294634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr19:52278773-52278503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 119
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr19:7978874-7978598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr19:33306784-33307068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr19:44839210-44838949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
6, 31
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr19:4448221-4448554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr19:11232243-11231917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr19:46918525-46918869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 281
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr19:10171674-10172026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr19:14928988-14928631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 285
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr19:25881091-25880731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr19:37647157-37646795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 275
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr19:30237719-30238090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr19:176507-176878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
7, 139
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr19:930835-931210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr19:4389796-4390159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 124
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr19:4445936-4445568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 139
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr19:15797652-15798024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 124
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr19:21336569-21336197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
10, 141
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr19:30518737-30519109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
9, 139
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr19:41673558-41673190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 106
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr19:31825341-31824951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 169
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr19:39245584-39245962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr19:23403966-23403580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr19:38842862-38842495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr19:8033423-8033815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 140
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr19:25999319-25999685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr19:7543106-7543487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr19:2734136-2734523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr19:36722019-36722406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
8, 38
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr19:20671217-20670805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr19:8375617-8375188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 123
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr19:12036820-12036392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
9, 123
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr19:32457327-32457757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 122
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr19:6515945-6516386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 122
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr19:23222327-23222763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr19:5656426-5655989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 141
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr19:21198811-21199278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 275
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr19:6688321-6687818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr19:39056929-39057425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr19:15068309-15067824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 112
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr19:25696521-25696020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 74
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr19:53657585-53658071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr19:43431634-43431133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr19:12698011-12698507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr19:14253318-14253825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 258
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr19:54942661-54943158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr19:5185569-5185066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 142
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr19:12601496-12601994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 125
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr19:15437793-15438297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr19:22778890-22779404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr19:34956013-34955520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 271
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr19:730046-729552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr19:4588036-4587533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 141
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr19:16566843-16567355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr19:33912948-33912429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 124
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr19:24061981-24062471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 124
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr19:10754997-10755499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr19:22765301-22765810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 262
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr19:39623097-39622587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr19:47859609-47859116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
2-196
               

               
Cow position:
               
chr19:24005064-24005259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 141
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr19:48409201-48409468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
6, 65
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr19:1901316-1901033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 137
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr19:4340222-4339949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
2-333
               

               
Cow position:
               
chr19:43703017-43702701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
6, 101
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr19:25053990-25053600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr19:42240605-42240229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 121
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr19:31396205-31395821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
8, 122
               

               
Conread position:
               
2-419
               

               
Cow position:
               
chr19:52457066-52456666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
2-427
               

               
Cow position:
               
chr19:2821264-2821684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
2-440
               

               
Cow position:
               
chr19:53543194-53542784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
2-509
               

               
Cow position:
               
chr19:23785874-23786360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 274
               

               
Conread position:
               
2-510
               

               
Cow position:
               
chr19:2589199-2589709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr19:8128002-8128504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 199
               

               
Conread position:
               
3-342
               

               
Cow position:
               
chr19:39697759-39698081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
5, 75
               

               
Conread position:
               
3-427
               

               
Cow position:
               
chr19:14592740-14593158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 28
               

               
Conread position:
               
3-438
               

               
Cow position:
               
chr19:34620348-34619916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 127
               

               
Conread position:
               
3-467
               

               
Cow position:
               
chr19:35018559-35018103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
3-511
               

               
Cow position:
               
chr19:33747539-33748048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
7, 122
               

               
Conread position:
               
3-514
               

               
Cow position:
               
chr19:24358537-24358062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 118
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr19:38596303-38596584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 135
               

               
Conread position:
               
4-378
               

               
Cow position:
               
chr19:5906867-5906499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 135
               

               
Conread position:
               
4-438
               

               
Cow position:
               
chr19:18786637-18786209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 136
               

               
Conread position:
               
4-514
               

               
Cow position:
               
chr19:31381308-31380827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 119
               

               
Conread position:
               
7-150
               

               
Cow position:
               
chr19:52196242-52196387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
69, 133
               

               
Conread position:
               
7-504
               

               
Cow position:
               
chr19:20622353-20622845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 78
               

               
Conread position:
               
7-509
               

               
Cow position:
               
chr19:35539996-35540476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
7-514
               

               
Cow position:
               
chr19:1355304-1355804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 116
               

               
Conread position:
               
8-394
               

               
Cow position:
               
chr19:34425274-34425648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
30, 115
               

               
Conread position:
               
8-415
               

               
Cow position:
               
chr19:31594991-31595391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 115
               

               
Conread position:
               
8-437
               

               
Cow position:
               
chr19:9542205-9541787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 267
               

               
Conread position:
               
8-440
               

               
Cow position:
               
chr19:17795585-17796011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 89
               

               
Conread position:
               
8-446
               

               
Cow position:
               
chr19:12712188-12711754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
8-447
               

               
Cow position:
               
chr19:35741849-35742278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 132
               

               
Conread position:
               
8-507
               

               
Cow position:
               
chr19:6417292-6417799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 110
               

               
Conread position:
               
8-507
               

               
Cow position:
               
chr19:7053641-7053154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
62, 116
               

               
Conread position:
               
9-247
               

               
Cow position:
               
chr19:55357750-55357991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
159, 41
               

               
Conread position:
               
9-268
               

               
Cow position:
               
chr19:2138412-2138150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
71, 111
               

               
Conread position:
               
9-272
               

               
Cow position:
               
chr19:8212148-8211877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 134
               

               
Conread position:
               
9-389
               

               
Cow position:
               
chr19:26086888-26087259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 130
               

               
Conread position:
               
9-419
               

               
Cow position:
               
chr19:56382842-56383249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
10-201
               

               
Cow position:
               
chr19:23832869-23832685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
158, 48
               

               
Conread position:
               
10-225
               

               
Cow position:
               
chr19:33622006-33622216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
10-236
               

               
Cow position:
               
chr19:19499858-19499633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
158, 73
               

               
Conread position:
               
10-246
               

               
Cow position:
               
chr19:25025791-25025564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
158, 9
               

               
Conread position:
               
10-254
               

               
Cow position:
               
chr19:7612323-7612559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
10-266
               

               
Cow position:
               
chr19:14473084-14472824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
67, 204
               

               
Conread position:
               
10-266
               

               
Cow position:
               
chr19:27348567-27348320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
10-273
               

               
Cow position:
               
chr19:46181118-46180856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
10-367
               

               
Cow position:
               
chr19:36352295-36352644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
117, 113
               

               
Conread position:
               
10-371
               

               
Cow position:
               
chr19:11171524-11171170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
10-377
               

               
Cow position:
               
chr19:14623887-14623532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 114
               

               
Conread position:
               
10-378
               

               
Cow position:
               
chr19:21705769-21706131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
10-400
               

               
Cow position:
               
chr19:51401316-51400939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 134
               

               
Conread position:
               
10-418
               

               
Cow position:
               
chr19:43440857-43441261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 129
               

               
Conread position:
               
10-429
               

               
Cow position:
               
chr19:36461834-36461423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 115
               

               
Conread position:
               
10-434
               

               
Cow position:
               
chr19:16694351-16693920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 31
               

               
Conread position:
               
10-462
               

               
Cow position:
               
chr19:17274022-17273602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
10-499
               

               
Cow position:
               
chr19:13129588-13130047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 28
               

               
Conread position:
               
10-500
               

               
Cow position:
               
chr19:38340277-38339791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 20
               

               
Conread position:
               
10-504
               

               
Cow position:
               
chr19:24144701-24145209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 142
               

               
Conread position:
               
10-504
               

               
Cow position:
               
chr19:25727184-25726697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
10-504
               

               
Cow position:
               
chr19:29627673-29627194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
10-506
               

               
Cow position:
               
chr19:2577270-2577750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 100
               

               
Conread position:
               
10-507
               

               
Cow position:
               
chr19:3246340-3245865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
70, 84
               

               
Conread position:
               
10-507
               

               
Cow position:
               
chr19:16096858-16096362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 131
               

               
Conread position:
               
10-509
               

               
Cow position:
               
chr19:39576875-39576381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 109
               

               
Conread position:
               
10-510
               

               
Cow position:
               
chr19:13267492-13267012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 116
               

               
Conread position:
               
10-512
               

               
Cow position:
               
chr19:39751179-39751667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
10-513
               

               
Cow position:
               
chr19:38392491-38393005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
10-514
               

               
Cow position:
               
chr19:44144211-44143743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
11-260
               

               
Cow position:
               
chr19:24192099-24192335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 108
               

               
Conread position:
               
11-350
               

               
Cow position:
               
chr19:10964903-10964566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
11-378
               

               
Cow position:
               
chr19:18750386-18750022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 129
               

               
Conread position:
               
11-504
               

               
Cow position:
               
chr19:44397198-44397695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
11-513
               

               
Cow position:
               
chr19:40051690-40051199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 83
               

               
Conread position:
               
12-269
               

               
Cow position:
               
chr19:33932447-33932192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
12-276
               

               
Cow position:
               
chr19:36176436-36176710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr19:53418307-53418692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
58, 272
               

               
Conread position:
               
12-439
               

               
Cow position:
               
chr19:48474840-48475242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
12-508
               

               
Cow position:
               
chr19:35380851-35380348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
12-508
               

               
Cow position:
               
chr19:47773225-47772742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
12-514
               

               
Cow position:
               
chr19:43058226-43058736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
13-440
               

               
Cow position:
               
chr19:53623261-53623672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
13-513
               

               
Cow position:
               
chr19:20661720-20661215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 91
               

               
Conread position:
               
16-261
               

               
Cow position:
               
chr19:30925615-30925374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
117, 36
               

               
Conread position:
               
16-278
               

               
Cow position:
               
chr19:53645714-53645458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
149, 106
               

               
Conread position:
               
16-288
               

               
Cow position:
               
chr19:30746102-30746379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
111, 60
               

               
Conread position:
               
16-441
               

               
Cow position:
               
chr19:30232434-30232826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
152, 22
               

               
Conread position:
               
17-285
               

               
Cow position:
               
chr19:25637798-25637525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
18-267
               

               
Cow position:
               
chr19:42647364-42647107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
18-272
               

               
Cow position:
               
chr19:20693201-20693455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 60
               

               
Conread position:
               
18-276
               

               
Cow position:
               
chr19:15863339-15863080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
18-499
               

               
Cow position:
               
chr19:46454547-46455024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
18-514
               

               
Cow position:
               
chr19:386847-387330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 104
               

               
Conread position:
               
19-389
               

               
Cow position:
               
chr19:6610298-6609933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
61, 120
               

               
Conread position:
               
19-461
               

               
Cow position:
               
chr19:21065482-21065903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
19-513
               

               
Cow position:
               
chr19:56063725-56063245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
20-265
               

               
Cow position:
               
chr19:21380221-21379979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
20-506
               

               
Cow position:
               
chr19:268058-268538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
21-278
               

               
Cow position:
               
chr19:35622067-35622326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 107
               

               
Conread position:
               
22-421
               

               
Cow position:
               
chr19:47118790-47118398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 28
               

               
Conread position:
               
23-509
               

               
Cow position:
               
chr19:29368107-29368588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
23-509
               

               
Cow position:
               
chr19:29625613-29626093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 14
               

               
Conread position:
               
24-427
               

               
Cow position:
               
chr19:55236201-55236587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
28-256
               

               
Cow position:
               
chr19:53037441-53037210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
139, 94
               

               
Conread position:
               
28-419
               

               
Cow position:
               
chr19:17479248-17478866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
31-511
               

               
Cow position:
               
chr19:23304779-23304294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 92
               

               
Conread position:
               
31-511
               

               
Cow position:
               
chr19:34166058-34166563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 228
               

               
Conread position:
               
32-337
               

               
Cow position:
               
chr19:44757891-44757606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
5, 89
               

               
Conread position:
               
32-381
               

               
Cow position:
               
chr19:10232686-10232354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
32-508
               

               
Cow position:
               
chr19:15887607-15887124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 59
               

               
Conread position:
               
32-512
               

               
Cow position:
               
chr19:55952427-55951968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
134, 50
               

               
Conread position:
               
32-514
               

               
Cow position:
               
chr19:50562401-50562881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 54
               

               
Conread position:
               
33-279
               

               
Cow position:
               
chr19:50646867-50646623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
34-237
               

               
Cow position:
               
chr19:54666940-54666731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
36-440
               

               
Cow position:
               
chr19:19919737-19919347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 30
               

               
Conread position:
               
37-268
               

               
Cow position:
               
chr19:8839324-8839557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
37-373
               

               
Cow position:
               
chr19:47558083-47558403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
37-404
               

               
Cow position:
               
chr19:36379969-36380336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
37-426
               

               
Cow position:
               
chr19:31846821-31846449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 70
               

               
Conread position:
               
37-427
               

               
Cow position:
               
chr19:8332016-8332402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 100
               

               
Conread position:
               
37-427
               

               
Cow position:
               
chr19:51185148-51185524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
37-509
               

               
Cow position:
               
chr19:1152945-1153381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
37-511
               

               
Cow position:
               
chr19:20935476-20935948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
37-514
               

               
Cow position:
               
chr19:40449753-40450200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 38
               

               
Conread position:
               
38-278
               

               
Cow position:
               
chr19:419599-419851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
38-434
               

               
Cow position:
               
chr19:9704108-9703731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
38-437
               

               
Cow position:
               
chr19:2208053-2207679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 100
               

               
Conread position:
               
38-467
               

               
Cow position:
               
chr19:35064462-35064060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
181, 47
               

               
Conread position:
               
39-350
               

               
Cow position:
               
chr19:32450800-32451110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
40-438
               

               
Cow position:
               
chr19:48722750-48723136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
31, 27
               

               
Conread position:
               
40-514
               

               
Cow position:
               
chr19:7668423-7668893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
41-277
               

               
Cow position:
               
chr19:4537687-4537455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
118, 82
               

               
Conread position:
               
41-400
               

               
Cow position:
               
chr19:19661767-19662118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 151
               

               
Conread position:
               
41-433
               

               
Cow position:
               
chr19:36059657-36060046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
41-435
               

               
Cow position:
               
chr19:25653032-25652649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
41-451
               

               
Cow position:
               
chr19:31873842-31874238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
39, 97
               

               
Conread position:
               
43-418
               

               
Cow position:
               
chr19:42205665-42206016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
43-430
               

               
Cow position:
               
chr19:3496447-3496069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
43-439
               

               
Cow position:
               
chr19:21335885-21335481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
43-492
               

               
Cow position:
               
chr19:9583042-9583452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 77
               

               
Conread position:
               
44-199
               

               
Cow position:
               
chr19:11145881-11145726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
44-236
               

               
Cow position:
               
chr19:7492167-7492355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
44-266
               

               
Cow position:
               
chr19:39794685-39794916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
44-273
               

               
Cow position:
               
chr19:2735250-2735010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 203
               

               
Conread position:
               
44-279
               

               
Cow position:
               
chr19:33882429-33882207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
44-373
               

               
Cow position:
               
chr19:33823045-33823367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
44-414
               

               
Cow position:
               
chr19:47109771-47110130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
44-440
               

               
Cow position:
               
chr19:14347738-14348126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
44-441
               

               
Cow position:
               
chr19:13316673-13316305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
44-505
               

               
Cow position:
               
chr19:33033718-33033255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
44-509
               

               
Cow position:
               
chr19:47671480-47671927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 78
               

               
Conread position:
               
44-512
               

               
Cow position:
               
chr19:5648923-5648493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
44-513
               

               
Cow position:
               
chr19:36844977-36845442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
44-514
               

               
Cow position:
               
chr19:39360868-39361351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
44-514
               

               
Cow position:
               
chr19:41023957-41024419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
45-342
               

               
Cow position:
               
chr19:2260396-2260112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
45-441
               

               
Cow position:
               
chr19:1664465-1664074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
45-504
               

               
Cow position:
               
chr19:53791701-53791245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
41, 203
               

               
Conread position:
               
45-512
               

               
Cow position:
               
chr19:53372166-53371697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
45-513
               

               
Cow position:
               
chr19:42694717-42695186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
46-354
               

               
Cow position:
               
chr19:15766946-15767232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
205, 32
               

               
Conread position:
               
46-414
               

               
Cow position:
               
chr19:14993190-14992808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
27, 33
               

               
Conread position:
               
46-419
               

               
Cow position:
               
chr19:21363711-21363343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
46-439
               

               
Cow position:
               
chr19:10080799-10081189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
46-442
               

               
Cow position:
               
chr19:30886124-30886513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 228
               

               
Conread position:
               
46-490
               

               
Cow position:
               
chr19:41584704-41585146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 78
               

               
Conread position:
               
46-493
               

               
Cow position:
               
chr19:10213401-10213845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
47-475
               

               
Cow position:
               
chr19:10545977-10545549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 57
               

               
Conread position:
               
47-505
               

               
Cow position:
               
chr19:38638070-38637595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
47-507
               

               
Cow position:
               
chr19:3812284-3811831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
47-512
               

               
Cow position:
               
chr19:27612436-27611985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 96
               

               
Conread position:
               
48-415
               

               
Cow position:
               
chr19:990677-990324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
48-431
               

               
Cow position:
               
chr19:4502952-4503326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
48-454
               

               
Cow position:
               
chr19:7473435-7473826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
49-224
               

               
Cow position:
               
chr19:35076754-35076588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
49-228
               

               
Cow position:
               
chr19:38812472-38812643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
49-273
               

               
Cow position:
               
chr19:10093028-10093253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
49-378
               

               
Cow position:
               
chr19:29070974-29070666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
49-503
               

               
Cow position:
               
chr19:1968571-1968134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 92
               

               
Conread position:
               
50-510
               

               
Cow position:
               
chr19:7637503-7637041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
50-514
               

               
Cow position:
               
chr19:5913216-5912758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
50-514
               

               
Cow position:
               
chr19:52381266-52381721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
51-438
               

               
Cow position:
               
chr19:33468759-33469134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
52-511
               

               
Cow position:
               
chr19:41945926-41946376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 69
               

               
Conread position:
               
52-514
               

               
Cow position:
               
chr19:12748029-12747579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
54-268
               

               
Cow position:
               
chr19:1898493-1898281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 29
               

               
Conread position:
               
56-440
               

               
Cow position:
               
chr19:53243733-53243364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
56-492
               

               
Cow position:
               
chr19:21378726-21378290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 70
               

               
Conread position:
               
56-514
               

               
Cow position:
               
chr19:3621168-3621627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
57-268
               

               
Cow position:
               
chr19:37562251-37562052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
58-236
               

               
Cow position:
               
chr19:46159799-46159978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
58-285
               

               
Cow position:
               
chr19:44125391-44125614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
59-494
               

               
Cow position:
               
chr19:55589975-55590413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
60-286
               

               
Cow position:
               
chr19:13390664-13390884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
20, 63
               

               
Conread position:
               
60-419
               

               
Cow position:
               
chr19:20310886-20310545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
61-267
               

               
Cow position:
               
chr19:25852087-25851875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
63-378
               

               
Cow position:
               
chr19:32754262-32754580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
82, 220
               

               
Conread position:
               
63-496
               

               
Cow position:
               
chr19:26976300-26975891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 60
               

               
Conread position:
               
64-443
               

               
Cow position:
               
chr19:25865176-25864788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
65-269
               

               
Cow position:
               
chr19:53953895-53953705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
67-274
               

               
Cow position:
               
chr19:31762776-31762989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
67-415
               

               
Cow position:
               
chr19:34911638-34911990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
67-499
               

               
Cow position:
               
chr19:35762504-35762072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 198
               

               
Conread position:
               
68-508
               

               
Cow position:
               
chr19:51751418-51750976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr19:47187298-47187031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
127, 53
               

               
Conread position:
               
69-504
               

               
Cow position:
               
chr19:28924497-28924948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
69-507
               

               
Cow position:
               
chr19:11191869-11191430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
69-510
               

               
Cow position:
               
chr19:55247380-55247822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
69-514
               

               
Cow position:
               
chr19:43413534-43413977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
70-514
               

               
Cow position:
               
chr19:30471582-30471159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 53
               

               
Conread position:
               
71-426
               

               
Cow position:
               
chr19:22799327-22798976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
71-505
               

               
Cow position:
               
chr19:44489848-44490279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 38
               

               
Conread position:
               
74-267
               

               
Cow position:
               
chr19:23244761-23244567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 48
               

               
Conread position:
               
78-501
               

               
Cow position:
               
chr19:34287791-34288200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
78-513
               

               
Cow position:
               
chr19:8864512-8864941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
79-509
               

               
Cow position:
               
chr19:6531655-6532067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
81-443
               

               
Cow position:
               
chr19:25851722-25851352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 60
               

               
Conread position:
               
84-514
               

               
Cow position:
               
chr19:36245717-36245312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 54
               

               
Conread position:
               
86-506
               

               
Cow position:
               
chr19:35344707-35345100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
89-427
               

               
Cow position:
               
chr19:20984996-20984671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
89-440
               

               
Cow position:
               
chr19:22134371-22134037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
44, 49
               

               
Conread position:
               
92-389
               

               
Cow position:
               
chr19:8270830-8270536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 46
               

               
Conread position:
               
93-368
               

               
Cow position:
               
chr19:35846673-35846942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
93-446
               

               
Cow position:
               
chr19:51231042-51230703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
93-514
               

               
Cow position:
               
chr19:33903644-33903228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
94-378
               

               
Cow position:
               
chr19:22039550-22039827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
94-395
               

               
Cow position:
               
chr19:7158954-7158650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 180
               

               
Conread position:
               
94-435
               

               
Cow position:
               
chr19:22154082-22153740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 148
               

               
Conread position:
               
95-440
               

               
Cow position:
               
chr19:6079579-6079250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
95-440
               

               
Cow position:
               
chr19:34000990-34001323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
95-504
               

               
Cow position:
               
chr19:24137038-24137453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 45
               

               
Conread position:
               
96-440
               

               
Cow position:
               
chr19:55688922-55688582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
98-506
               

               
Cow position:
               
chr19:42903802-42904182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 24
               

               
Conread position:
               
98-508
               

               
Cow position:
               
chr19:23784618-23784232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
101-278
               

               
Cow position:
               
chr19:42746546-42746370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
102-511
               

               
Cow position:
               
chr19:33290269-33290659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
104-290
               

               
Cow position:
               
chr19:38724061-38723871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
104-505
               

               
Cow position:
               
chr19:48960179-48960582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
105-514
               

               
Cow position:
               
chr19:51285416-51285835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
111-441
               

               
Cow position:
               
chr19:53840312-53840632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
116-506
               

               
Cow position:
               
chr19:3216818-3217193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 96
               

               
Conread position:
               
123-400
               

               
Cow position:
               
chr19:4329243-4328978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
123-439
               

               
Cow position:
               
chr19:32506306-32506002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
123-439
               

               
Cow position:
               
chr19:43291852-43292168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
123-447
               

               
Cow position:
               
chr19:11424505-11424195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
123-509
               

               
Cow position:
               
chr19:16621552-16621165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 155
               

               
Conread position:
               
123-513
               

               
Cow position:
               
chr19:22043540-22043160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
124-419
               

               
Cow position:
               
chr19:25628327-25628042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
125-389
               

               
Cow position:
               
chr19:41518105-41517824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 177
               

               
Conread position:
               
126-511
               

               
Cow position:
               
chr19:24760073-24759692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
128-278
               

               
Cow position:
               
chr19:15442574-15442729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 148
               

               
Conread position:
               
130-323
               

               
Cow position:
               
chr19:4722224-4722022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
130-509
               

               
Cow position:
               
chr19:10242395-10242753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
132-393
               

               
Cow position:
               
chr19:10173303-10173047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
36, 144
               

               
Conread position:
               
132-505
               

               
Cow position:
               
chr19:42563950-42564336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
132-511
               

               
Cow position:
               
chr19:43663-44041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
136-431
               

               
Cow position:
               
chr19:11876886-11876595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 137
               

               
Conread position:
               
137-378
               

               
Cow position:
               
chr19:12709996-12709757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 127
               

               
Conread position:
               
137-434
               

               
Cow position:
               
chr19:7884405-7884687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
137-501
               

               
Cow position:
               
chr19:22450119-22449732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
29, 145
               

               
Conread position:
               
137-504
               

               
Cow position:
               
chr19:25769483-25769862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 148
               

               
Conread position:
               
140-268
               

               
Cow position:
               
chr19:42070122-42069992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
146-440
               

               
Cow position:
               
chr19:55394733-55395017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
147-514
               

               
Cow position:
               
chr19:38499996-38500354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
148-470
               

               
Cow position:
               
chr19:7404546-7404231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
148-505
               

               
Cow position:
               
chr19:26753866-26754227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 86
               

               
Conread position:
               
149-510
               

               
Cow position:
               
chr19:15719787-15719434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
149-512
               

               
Cow position:
               
chr19:52158369-52158738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
150-433
               

               
Cow position:
               
chr19:11442812-11443099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
18, 128
               

               
Conread position:
               
151-509
               

               
Cow position:
               
chr19:31535961-31536301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
155-356
               

               
Cow position:
               
chr19:18153008-18153196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
156-437
               

               
Cow position:
               
chr19:4800580-4800853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 119
               

               
Conread position:
               
157-435
               

               
Cow position:
               
chr19:52185928-52185655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
164-440
               

               
Cow position:
               
chr19:46094791-46094521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 118
               

               
Conread position:
               
165-419
               

               
Cow position:
               
chr19:42273998-42273755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 109
               

               
Conread position:
               
165-440
               

               
Cow position:
               
chr19:25807453-25807192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
165-447
               

               
Cow position:
               
chr19:33237025-33237296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
165-507
               

               
Cow position:
               
chr19:39385188-39384856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
165-514
               

               
Cow position:
               
chr19:47453285-47453628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
167-325
               

               
Cow position:
               
chr19:19173995-19174152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
167-492
               

               
Cow position:
               
chr19:29115595-29115905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
168-492
               

               
Cow position:
               
chr19:42517409-42517078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 107
               

               
Conread position:
               
168-507
               

               
Cow position:
               
chr19:50849674-50850021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
171-337
               

               
Cow position:
               
chr19:7492685-7492841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
171-427
               

               
Cow position:
               
chr19:50682584-50682343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
171-485
               

               
Cow position:
               
chr19:21816817-21817135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
171-503
               

               
Cow position:
               
chr19:15092272-15091958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 46
               

               
Conread position:
               
172-512
               

               
Cow position:
               
chr19:39254597-39254253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
172-514
               

               
Cow position:
               
chr19:8869435-8869773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
174-470
               

               
Cow position:
               
chr19:7741747-7741451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
174-509
               

               
Cow position:
               
chr19:17020151-17020454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
174-514
               

               
Cow position:
               
chr19:52750902-52750561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 104
               

               
Conread position:
               
176-511
               

               
Cow position:
               
chr19:13121414-13121090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
179-475
               

               
Cow position:
               
chr19:25041375-25041087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
182-513
               

               
Cow position:
               
chr19:40027065-40026755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
183-514
               

               
Cow position:
               
chr19:2221210-2220874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
189-503
               

               
Cow position:
               
chr19:39664706-39664388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
194-514
               

               
Cow position:
               
chr19:10971216-10970910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
57, 27
               

               
Conread position:
               
196-357
               

               
Cow position:
               
chr19:12093883-12094043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
55, 88
               

               
Conread position:
               
196-510
               

               
Cow position:
               
chr19:14632155-14631847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
197-457
               

               
Cow position:
               
chr19:23394667-23394916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
197-505
               

               
Cow position:
               
chr19:3870486-3870786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 29
               

               
Conread position:
               
199-439
               

               
Cow position:
               
chr19:34819306-34819072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
200-469
               

               
Cow position:
               
chr19:47986740-47987008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
208-503
               

               
Cow position:
               
chr19:19549656-19549368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
215-508
               

               
Cow position:
               
chr19:39649176-39648898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
221-440
               

               
Cow position:
               
chr19:6343977-6344188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
221-512
               

               
Cow position:
               
chr19:23832692-23832402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
222-509
               

               
Cow position:
               
chr19:16659654-16659394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
255, 52
               

               
Conread position:
               
222-509
               

               
Cow position:
               
chr19:49221710-49221429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
206, 25
               

               
Conread position:
               
222-511
               

               
Cow position:
               
chr19:40127260-40126970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
223-469
               

               
Cow position:
               
chr19:30910049-30910289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
223-514
               

               
Cow position:
               
chr19:41695758-41695475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
231-510
               

               
Cow position:
               
chr19:35322221-35321943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
232-492
               

               
Cow position:
               
chr19:25763029-25763281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
196, 23
               

               
Conread position:
               
232-506
               

               
Cow position:
               
chr19:4987851-4987576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
234-432
               

               
Cow position:
               
chr19:39781435-39781627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
235-492
               

               
Cow position:
               
chr19:13488586-13488330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
236-492
               

               
Cow position:
               
chr19:25410923-25410678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
240-513
               

               
Cow position:
               
chr19:1978092-1978372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
250-485
               

               
Cow position:
               
chr19:39613234-39613003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
179, 29
               

               
Conread position:
               
250-513
               

               
Cow position:
               
chr19:39758457-39758718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
191, 20
               

               
Conread position:
               
261-513
               

               
Cow position:
               
chr19:3857975-3857713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
266-514
               

               
Cow position:
               
chr19:21176798-21176548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
157, 22
               

               
Conread position:
               
267-510
               

               
Cow position:
               
chr19:11560097-11559841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
270-508
               

               
Cow position:
               
chr19:5406445-5406693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
270-511
               

               
Cow position:
               
chr19:17297116-17297359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 104
               

               
Conread position:
               
271-454
               

               
Cow position:
               
chr19:16105134-16104947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
271-475
               

               
Cow position:
               
chr19:28447389-28447596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
271-490
               

               
Cow position:
               
chr19:33913474-33913704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
158, 21
               

               
Conread position:
               
271-507
               

               
Cow position:
               
chr19:4459494-4459252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
157, 232
               

               
Conread position:
               
271-509
               

               
Cow position:
               
chr19:23087933-23088174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
167, 19
               

               
Conread position:
               
271-509
               

               
Cow position:
               
chr19:33988013-33988260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
271-514
               

               
Cow position:
               
chr19:10238684-10238934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr19:6309969-6309733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
272-505
               

               
Cow position:
               
chr19:37067086-37067322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
273-467
               

               
Cow position:
               
chr19:34758051-34757864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
276-508
               

               
Cow position:
               
chr19:49290503-49290266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
149, 64
               

               
Conread position:
               
278-514
               

               
Cow position:
               
chr19:17869157-17868920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
280-510
               

               
Cow position:
               
chr19:2068223-2068458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
150, 12
               

               
Conread position:
               
281-466
               

               
Cow position:
               
chr19:15362743-15362549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
282-512
               

               
Cow position:
               
chr19:38021400-38021639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 145
               

               
Conread position:
               
283-440
               

               
Cow position:
               
chr19:30241658-30241813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
283-489
               

               
Cow position:
               
chr19:18921288-18921077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
283-512
               

               
Cow position:
               
chr19:23889528-23889290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
138, 9
               

               
Conread position:
               
283-513
               

               
Cow position:
               
chr19:17354817-17355056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
145, 9
               

               
Conread position:
               
284-440
               

               
Cow position:
               
chr19:12705879-12705724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
285-511
               

               
Cow position:
               
chr19:39795151-39795385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
141, 5
               

               
Conread position:
               
292-439
               

               
Cow position:
               
chr19:7675201-7675348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
292-439
               

               
Cow position:
               
chr19:9391184-9391037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
292-440
               

               
Cow position:
               
chr19:43373006-43373154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
292-499
               

               
Cow position:
               
chr19:34608230-34608016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
292-503
               

               
Cow position:
               
chr19:10930449-10930239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
292-503
               

               
Cow position:
               
chr19:30227488-30227709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
136, 8
               

               
Conread position:
               
292-508
               

               
Cow position:
               
chr19:23378643-23378869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
292-509
               

               
Cow position:
               
chr19:53378668-53378893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
292-511
               

               
Cow position:
               
chr19:37467094-37466866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
292-512
               

               
Cow position:
               
chr19:30007159-30007382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
100, 134
               

               
Conread position:
               
292-513
               

               
Cow position:
               
chr19:24956270-24956046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
292-514
               

               
Cow position:
               
chr19:11194795-11194566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
292-514
               

               
Cow position:
               
chr19:23756775-23756553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
180, 137
               

               
Conread position:
               
292-514
               

               
Cow position:
               
chr19:26167945-26167717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
136, 180
               

               
Conread position:
               
292-514
               

               
Cow position:
               
chr19:38732106-38732336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
293-427
               

               
Cow position:
               
chr19:2965510-2965642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
293-436
               

               
Cow position:
               
chr19:33241538-33241395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
293-507
               

               
Cow position:
               
chr19:10538583-10538367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
293-510
               

               
Cow position:
               
chr19:28810349-28810122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
295-495
               

               
Cow position:
               
chr19:9573197-9572990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
296-492
               

               
Cow position:
               
chr19:14563342-14563542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 110
               

               
Conread position:
               
296-505
               

               
Cow position:
               
chr19:28037935-28037728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
177, 125
               

               
Conread position:
               
296-506
               

               
Cow position:
               
chr19:25835356-25835147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
176, 54
               

               
Conread position:
               
296-508
               

               
Cow position:
               
chr19:41645334-41645542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
116, 100
               

               
Conread position:
               
296-509
               

               
Cow position:
               
chr19:46713608-46713817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
178, 115
               

               
Conread position:
               
296-512
               

               
Cow position:
               
chr19:26003644-26003436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
176, 106
               

               
Conread position:
               
297-492
               

               
Cow position:
               
chr19:19460413-19460612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
297-514
               

               
Cow position:
               
chr19:14581335-14581559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
144, 58
               

               
Conread position:
               
298-497
               

               
Cow position:
               
chr19:6854306-6854105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
299-514
               

               
Cow position:
               
chr19:8185177-8185403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
300-513
               

               
Cow position:
               
chr19:35245917-35246142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
301-446
               

               
Cow position:
               
chr19:30551993-30552137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
301-513
               

               
Cow position:
               
chr19:39587270-39587058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
302-507
               

               
Cow position:
               
chr19:24933546-24933340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
303-505
               

               
Cow position:
               
chr19:24692986-24693193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
135, 173
               

               
Conread position:
               
304-493
               

               
Cow position:
               
chr19:4117384-4117198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
169, 125
               

               
Conread position:
               
307-513
               

               
Cow position:
               
chr19:37560211-37560011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
172, 37
               

               
Conread position:
               
307-514
               

               
Cow position:
               
chr19:12279712-12279924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
119, 18
               

               
Conread position:
               
308-514
               

               
Cow position:
               
chr19:11816741-11816524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
310-438
               

               
Cow position:
               
chr19:9733581-9733454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
313-435
               

               
Cow position:
               
chr19:55175492-55175368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
314-510
               

               
Cow position:
               
chr19:52356241-52356446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
318-501
               

               
Cow position:
               
chr19:12202649-12202464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
319-509
               

               
Cow position:
               
chr19:29958684-29958495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 112
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr19:4586549-4586355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
324-496
               

               
Cow position:
               
chr19:42515347-42515524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
101, 155
               

               
Conread position:
               
327-511
               

               
Cow position:
               
chr19:2137823-2137632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
328-514
               

               
Cow position:
               
chr19:41187842-41188034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
330-507
               

               
Cow position:
               
chr19:24220495-24220314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
331-496
               

               
Cow position:
               
chr19:20425362-20425197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
331-499
               

               
Cow position:
               
chr19:41343324-41343499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
331-512
               

               
Cow position:
               
chr19:5522149-5521961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
332-505
               

               
Cow position:
               
chr19:41347382-41347557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 148
               

               
Conread position:
               
340-501
               

               
Cow position:
               
chr19:38597085-38597252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
340-514
               

               
Cow position:
               
chr19:46822724-46822907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
89, 56
               

               
Conread position:
               
341-493
               

               
Cow position:
               
chr19:10554283-10554127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
346-504
               

               
Cow position:
               
chr19:22871234-22871068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
346-509
               

               
Cow position:
               
chr19:12943654-12943813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
131, 78
               

               
Conread position:
               
348-492
               

               
Cow position:
               
chr19:24224362-24224510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
348-514
               

               
Cow position:
               
chr19:32937885-32938057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
350-514
               

               
Cow position:
               
chr19:6854943-6855115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
351-500
               

               
Cow position:
               
chr19:22836262-22836112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
353-511
               

               
Cow position:
               
chr19:10172365-10172525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
360-513
               

               
Cow position:
               
chr19:12263998-12264153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
361-513
               

               
Cow position:
               
chr19:19174554-19174713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
365-508
               

               
Cow position:
               
chr19:31268662-31268805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
112, 77
               

               
Conread position:
               
365-508
               

               
Cow position:
               
chr19:31268884-31269027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
112, 77
               
Show alignments to all cow chromosomes.