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Cow genome map

           
Conread name:
           
mE6-MI-P-E6-acx-c-02-1-UM.s1
        

               
Conread position:
               
1-187
               

               
Cow position:
               
chr23:27529591-27529409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr23:7937839-7937642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr23:9235368-9235164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr23:1664388-1664607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr23:28118403-28118167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr23:8698143-8698377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr23:15702808-15702566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
11, 99
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr23:26741753-26741518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
11, 117
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr23:5151676-5151923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
9, 151
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr23:221767-222012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr23:7392586-7392336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr23:27996835-27997109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr23:1430103-1429817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 123
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr23:14191249-14191565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr23:6720579-6720242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr23:9595132-9594781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
9, 103
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr23:7402403-7402758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr23:40825691-40826057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr23:1960032-1960401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr23:7429147-7429520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 124
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr23:17847012-17847374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr23:15529483-15529851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr23:34416266-34416637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr23:28052974-28053348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr23:18802576-18802192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 139
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr23:16563540-16563923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 122
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr23:10014245-10014618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr23:39806560-39806958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 173
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr23:29459397-29458983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr23:6158509-6158071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr23:1398337-1397910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr23:6995269-6994854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr23:38455488-38455049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr23:18698329-18697890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr23:1290000-1290437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr23:9268287-9268719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 138
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr23:14739150-14739627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr23:41472312-41472819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr23:11128929-11129434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 141
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr23:24509400-24509887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 95
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr23:37065537-37066062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr23:39752811-39753308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 139
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr23:4579340-4578826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 124
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr23:10852752-10853255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr23:40781025-40781522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 63
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr23:26986583-26986062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 135
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr23:25864982-25864483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 30
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr23:344478-343965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr23:1337617-1337095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 104
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr23:7844986-7845500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr23:13520155-13520656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 50
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr23:39778113-39778609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr23:1700620-1700871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr23:5870489-5870211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
7, 145
               

               
Conread position:
               
2-433
               

               
Cow position:
               
chr23:22298318-22297917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 120
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr23:1905726-1906165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 369
               

               
Conread position:
               
2-437
               

               
Cow position:
               
chr23:33601822-33601413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
2-440
               

               
Cow position:
               
chr23:10554313-10553880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 137
               

               
Conread position:
               
2-440
               

               
Cow position:
               
chr23:13511434-13511854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
2-443
               

               
Cow position:
               
chr23:9734117-9734540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr23:6593004-6592563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
10, 130
               

               
Conread position:
               
2-509
               

               
Cow position:
               
chr23:5389404-5389887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 27
               

               
Conread position:
               
3-426
               

               
Cow position:
               
chr23:34315269-34314842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
3-499
               

               
Cow position:
               
chr23:1536021-1536517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 126
               

               
Conread position:
               
4-436
               

               
Cow position:
               
chr23:13599049-13599465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 51
               

               
Conread position:
               
4-508
               

               
Cow position:
               
chr23:14839031-14838555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 26
               

               
Conread position:
               
4-512
               

               
Cow position:
               
chr23:3247292-3247799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr23:40734625-40734267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
73, 105
               

               
Conread position:
               
7-174
               

               
Cow position:
               
chr23:9132962-9132794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
7-427
               

               
Cow position:
               
chr23:19002364-19001954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 130
               

               
Conread position:
               
7-440
               

               
Cow position:
               
chr23:30662920-30662511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 58
               

               
Conread position:
               
8-199
               

               
Cow position:
               
chr23:3167948-3168145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 121
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr23:17891190-17890867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 112
               

               
Conread position:
               
8-415
               

               
Cow position:
               
chr23:34348041-34348419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
8-454
               

               
Cow position:
               
chr23:2799273-2799724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
9-184
               

               
Cow position:
               
chr23:35366392-35366217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
146, 113
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr23:14896096-14895871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
9-284
               

               
Cow position:
               
chr23:4980831-4980559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
159, 24
               

               
Conread position:
               
9-347
               

               
Cow position:
               
chr23:1670624-1670938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
187, 18
               

               
Conread position:
               
9-378
               

               
Cow position:
               
chr23:16172365-16172728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
78, 115
               

               
Conread position:
               
9-475
               

               
Cow position:
               
chr23:31970814-31970379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
239, 105
               

               
Conread position:
               
10-184
               

               
Cow position:
               
chr23:35369303-35369129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
145, 112
               

               
Conread position:
               
10-264
               

               
Cow position:
               
chr23:361204-360952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr23:39793160-39793415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 101
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr23:2179940-2179681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
10-277
               

               
Cow position:
               
chr23:18367403-18367677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
10-278
               

               
Cow position:
               
chr23:1009694-1009421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
10-279
               

               
Cow position:
               
chr23:32961669-32961385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
29, 122
               

               
Conread position:
               
10-329
               

               
Cow position:
               
chr23:39028508-39028798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
158, 61
               

               
Conread position:
               
10-350
               

               
Cow position:
               
chr23:39309407-39309071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
10-378
               

               
Cow position:
               
chr23:27403053-27403409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
114, 66
               

               
Conread position:
               
10-387
               

               
Cow position:
               
chr23:1604934-1605304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
10-391
               

               
Cow position:
               
chr23:1647326-1647696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
29, 123
               

               
Conread position:
               
10-400
               

               
Cow position:
               
chr23:15710370-15709983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
10-400
               

               
Cow position:
               
chr23:32309388-32309774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
10-437
               

               
Cow position:
               
chr23:5162134-5162555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
10-440
               

               
Cow position:
               
chr23:1924126-1923709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
10-440
               

               
Cow position:
               
chr23:4529185-4528751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 166
               

               
Conread position:
               
10-446
               

               
Cow position:
               
chr23:14164697-14164260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
10-467
               

               
Cow position:
               
chr23:21336782-21336327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 113
               

               
Conread position:
               
10-496
               

               
Cow position:
               
chr23:6223715-6224162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 52
               

               
Conread position:
               
10-506
               

               
Cow position:
               
chr23:29626121-29626630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 132
               

               
Conread position:
               
10-509
               

               
Cow position:
               
chr23:533940-534433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 26
               

               
Conread position:
               
11-245
               

               
Cow position:
               
chr23:8930404-8930182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
11-501
               

               
Cow position:
               
chr23:22804432-22804921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
11-512
               

               
Cow position:
               
chr23:31601750-31601240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 243
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr23:1545926-1546148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
153, 118
               

               
Conread position:
               
12-250
               

               
Cow position:
               
chr23:7596619-7596384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
12-274
               

               
Cow position:
               
chr23:1690497-1690761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
12-274
               

               
Cow position:
               
chr23:37992705-37992959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
147, 49
               

               
Conread position:
               
12-278
               

               
Cow position:
               
chr23:16610101-16609829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 112
               

               
Conread position:
               
12-389
               

               
Cow position:
               
chr23:3727690-3727307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 27
               

               
Conread position:
               
12-467
               

               
Cow position:
               
chr23:20744880-20744440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 112
               

               
Conread position:
               
12-511
               

               
Cow position:
               
chr23:20171288-20171771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 31
               

               
Conread position:
               
13-492
               

               
Cow position:
               
chr23:4972496-4972955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 52
               

               
Conread position:
               
13-513
               

               
Cow position:
               
chr23:1883103-1883604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
13-513
               

               
Cow position:
               
chr23:4726512-4727003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 35
               

               
Conread position:
               
14-387
               

               
Cow position:
               
chr23:41220522-41220141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
16-355
               

               
Cow position:
               
chr23:670344-670663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
16-440
               

               
Cow position:
               
chr23:1254383-1254816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
17-430
               

               
Cow position:
               
chr23:35363057-35362660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
17-438
               

               
Cow position:
               
chr23:20435338-20434937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
18-278
               

               
Cow position:
               
chr23:36129187-36128928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
61, 107
               

               
Conread position:
               
18-418
               

               
Cow position:
               
chr23:25669355-25668985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 103
               

               
Conread position:
               
18-437
               

               
Cow position:
               
chr23:24867017-24867435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 258
               

               
Conread position:
               
18-441
               

               
Cow position:
               
chr23:38208428-38208854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 14
               

               
Conread position:
               
18-513
               

               
Cow position:
               
chr23:28206326-28206810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 124
               

               
Conread position:
               
22-347
               

               
Cow position:
               
chr23:3208901-3208584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 55
               

               
Conread position:
               
22-387
               

               
Cow position:
               
chr23:7835779-7835409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
24-285
               

               
Cow position:
               
chr23:1605400-1605662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
24-288
               

               
Cow position:
               
chr23:33233184-33232926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
164, 43
               

               
Conread position:
               
24-368
               

               
Cow position:
               
chr23:3918377-3918038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
25-510
               

               
Cow position:
               
chr23:31493601-31494077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 23
               

               
Conread position:
               
28-334
               

               
Cow position:
               
chr23:41285654-41285942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
28-416
               

               
Cow position:
               
chr23:3262774-3262393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
28-496
               

               
Cow position:
               
chr23:22396716-22396262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 33
               

               
Conread position:
               
30-419
               

               
Cow position:
               
chr23:36309154-36309528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 47
               

               
Conread position:
               
30-500
               

               
Cow position:
               
chr23:20195189-20194732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
32-168
               

               
Cow position:
               
chr23:5744825-5744963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
5, 108
               

               
Conread position:
               
33-511
               

               
Cow position:
               
chr23:186901-187389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
34-475
               

               
Cow position:
               
chr23:3394758-3394329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 78
               

               
Conread position:
               
36-510
               

               
Cow position:
               
chr23:19758889-19758430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
37-268
               

               
Cow position:
               
chr23:36199027-36199258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
37-439
               

               
Cow position:
               
chr23:25358465-25358854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
37-513
               

               
Cow position:
               
chr23:21445859-21446320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
37-514
               

               
Cow position:
               
chr23:13555694-13555221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
37-514
               

               
Cow position:
               
chr23:29242676-29243144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 243
               

               
Conread position:
               
38-193
               

               
Cow position:
               
chr23:11209744-11209901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
40-507
               

               
Cow position:
               
chr23:20388899-20388460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 38
               

               
Conread position:
               
41-278
               

               
Cow position:
               
chr23:1991689-1991450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
43-337
               

               
Cow position:
               
chr23:19538254-19537968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 147
               

               
Conread position:
               
43-440
               

               
Cow position:
               
chr23:29034053-29034443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
43-504
               

               
Cow position:
               
chr23:33711512-33711964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
208, 23
               

               
Conread position:
               
43-508
               

               
Cow position:
               
chr23:26948930-26949397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 239
               

               
Conread position:
               
44-219
               

               
Cow position:
               
chr23:29742125-29742300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
44-242
               

               
Cow position:
               
chr23:38414216-38414023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
44-275
               

               
Cow position:
               
chr23:21343505-21343276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
44-279
               

               
Cow position:
               
chr23:15056900-15056665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
80, 97
               

               
Conread position:
               
44-286
               

               
Cow position:
               
chr23:22588529-22588281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
44-427
               

               
Cow position:
               
chr23:1721246-1720867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
44-433
               

               
Cow position:
               
chr23:17404593-17404960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
44-505
               

               
Cow position:
               
chr23:9652726-9652306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 81
               

               
Conread position:
               
44-506
               

               
Cow position:
               
chr23:4968778-4968327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 63
               

               
Conread position:
               
44-514
               

               
Cow position:
               
chr23:15287393-15286939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
45-440
               

               
Cow position:
               
chr23:3967805-3967431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
45-474
               

               
Cow position:
               
chr23:20057125-20056712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 228
               

               
Conread position:
               
45-503
               

               
Cow position:
               
chr23:6172920-6172485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
46-288
               

               
Cow position:
               
chr23:2259855-2259610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
5, 30
               

               
Conread position:
               
46-351
               

               
Cow position:
               
chr23:1803537-1803826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
46-440
               

               
Cow position:
               
chr23:17092745-17092368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
46-467
               

               
Cow position:
               
chr23:39775474-39775888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 76
               

               
Conread position:
               
46-504
               

               
Cow position:
               
chr23:8063296-8063730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
46-507
               

               
Cow position:
               
chr23:16583166-16582701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
47-505
               

               
Cow position:
               
chr23:29346015-29345574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 205
               

               
Conread position:
               
47-506
               

               
Cow position:
               
chr23:6244843-6244398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
48-261
               

               
Cow position:
               
chr23:1878126-1877913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
28, 91
               

               
Conread position:
               
48-278
               

               
Cow position:
               
chr23:808907-809145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
48-284
               

               
Cow position:
               
chr23:38854989-38854754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
48-414
               

               
Cow position:
               
chr23:11315272-11314931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
48-454
               

               
Cow position:
               
chr23:21452988-21452583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
48-488
               

               
Cow position:
               
chr23:26632545-26632986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 238
               

               
Conread position:
               
48-500
               

               
Cow position:
               
chr23:39302460-39302892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
48-510
               

               
Cow position:
               
chr23:16881412-16880962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
49-184
               

               
Cow position:
               
chr23:9725481-9725344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 6
               

               
Conread position:
               
49-258
               

               
Cow position:
               
chr23:4810496-4810711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
49-347
               

               
Cow position:
               
chr23:7221268-7220977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
31, 90
               

               
Conread position:
               
49-412
               

               
Cow position:
               
chr23:41590163-41589822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
49-508
               

               
Cow position:
               
chr23:2282428-2281982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
50-224
               

               
Cow position:
               
chr23:4338860-4338682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 89
               

               
Conread position:
               
51-398
               

               
Cow position:
               
chr23:33940408-33940071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
52-443
               

               
Cow position:
               
chr23:11045233-11045619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 86
               

               
Conread position:
               
53-488
               

               
Cow position:
               
chr23:9599252-9599674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
54-246
               

               
Cow position:
               
chr23:3140615-3140807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
54-508
               

               
Cow position:
               
chr23:22530666-22530231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
55-259
               

               
Cow position:
               
chr23:36726162-36725954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
55-447
               

               
Cow position:
               
chr23:18402534-18402155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
55-512
               

               
Cow position:
               
chr23:41348896-41348417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 241
               

               
Conread position:
               
55-514
               

               
Cow position:
               
chr23:15872949-15872503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
56-503
               

               
Cow position:
               
chr23:13359573-13360008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
58-232
               

               
Cow position:
               
chr23:7484835-7485007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
58-378
               

               
Cow position:
               
chr23:26849146-26848833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
58-411
               

               
Cow position:
               
chr23:40862094-40862445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
58-434
               

               
Cow position:
               
chr23:16700284-16699919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
58-475
               

               
Cow position:
               
chr23:6767647-6768080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 7
               

               
Conread position:
               
59-365
               

               
Cow position:
               
chr23:2055458-2055758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
24, 228
               

               
Conread position:
               
60-440
               

               
Cow position:
               
chr23:5706756-5707122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
61-513
               

               
Cow position:
               
chr23:1885418-1884962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
62-400
               

               
Cow position:
               
chr23:36076062-36075723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
62-514
               

               
Cow position:
               
chr23:24704033-24704495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
63-378
               

               
Cow position:
               
chr23:29521230-29521539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
90, 128
               

               
Conread position:
               
63-510
               

               
Cow position:
               
chr23:40891122-40891552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 60
               

               
Conread position:
               
65-451
               

               
Cow position:
               
chr23:6367368-6367744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
66-430
               

               
Cow position:
               
chr23:27544595-27544947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 57
               

               
Conread position:
               
68-390
               

               
Cow position:
               
chr23:10868527-10868844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
183, 55
               

               
Conread position:
               
68-398
               

               
Cow position:
               
chr23:25378421-25378733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
69-274
               

               
Cow position:
               
chr23:35254471-35254263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 97
               

               
Conread position:
               
69-279
               

               
Cow position:
               
chr23:11080848-11081054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
69-378
               

               
Cow position:
               
chr23:416927-417214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
69-399
               

               
Cow position:
               
chr23:12050132-12050444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
69-440
               

               
Cow position:
               
chr23:33717777-33717412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
99, 182
               

               
Conread position:
               
69-504
               

               
Cow position:
               
chr23:22674672-22674241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
69-507
               

               
Cow position:
               
chr23:10416656-10416222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 53
               

               
Conread position:
               
69-511
               

               
Cow position:
               
chr23:5603504-5603087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
404, 54
               

               
Conread position:
               
69-511
               

               
Cow position:
               
chr23:15742866-15743299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 53
               

               
Conread position:
               
79-269
               

               
Cow position:
               
chr23:31739636-31739828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
79-510
               

               
Cow position:
               
chr23:20558082-20557634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
84-275
               

               
Cow position:
               
chr23:1489838-1490026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
167, 39
               

               
Conread position:
               
84-332
               

               
Cow position:
               
chr23:1068531-1068295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
84-509
               

               
Cow position:
               
chr23:4504609-4505019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
84-514
               

               
Cow position:
               
chr23:2502067-2501645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
85-510
               

               
Cow position:
               
chr23:21659720-21660144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
67, 187
               

               
Conread position:
               
87-506
               

               
Cow position:
               
chr23:5723328-5723729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
88-512
               

               
Cow position:
               
chr23:18902265-18901856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
36, 53
               

               
Conread position:
               
89-266
               

               
Cow position:
               
chr23:4523192-4523013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
89-438
               

               
Cow position:
               
chr23:40648941-40648606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
90-440
               

               
Cow position:
               
chr23:18296595-18296936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
90-513
               

               
Cow position:
               
chr23:40789773-40790176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 30
               

               
Conread position:
               
92-513
               

               
Cow position:
               
chr23:1776841-1776442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 30
               

               
Conread position:
               
93-415
               

               
Cow position:
               
chr23:22399192-22399509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
93-434
               

               
Cow position:
               
chr23:1742148-1742476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
94-378
               

               
Cow position:
               
chr23:30585870-30585584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 44
               

               
Conread position:
               
95-268
               

               
Cow position:
               
chr23:4942310-4942142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
153, 53
               

               
Conread position:
               
95-455
               

               
Cow position:
               
chr23:21764710-21765067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
95-514
               

               
Cow position:
               
chr23:23409539-23409927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
97-508
               

               
Cow position:
               
chr23:4646308-4646713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
66, 113
               

               
Conread position:
               
100-391
               

               
Cow position:
               
chr23:29786555-29786266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
100-505
               

               
Cow position:
               
chr23:20248902-20248491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 169
               

               
Conread position:
               
102-402
               

               
Cow position:
               
chr23:36017942-36018242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
104-274
               

               
Cow position:
               
chr23:30999377-30999552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 34
               

               
Conread position:
               
104-449
               

               
Cow position:
               
chr23:5451123-5451455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
106-510
               

               
Cow position:
               
chr23:5426231-5426645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
109-505
               

               
Cow position:
               
chr23:33569942-33570334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
111-443
               

               
Cow position:
               
chr23:19371262-19370939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
118-466
               

               
Cow position:
               
chr23:3282303-3281969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 123
               

               
Conread position:
               
122-514
               

               
Cow position:
               
chr23:25675877-25675484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
123-399
               

               
Cow position:
               
chr23:20996289-20996546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
131, 40
               

               
Conread position:
               
123-514
               

               
Cow position:
               
chr23:38973663-38974046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
124-509
               

               
Cow position:
               
chr23:39813327-39813710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
129-437
               

               
Cow position:
               
chr23:12334034-12334335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
134-436
               

               
Cow position:
               
chr23:4966649-4966943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
137-440
               

               
Cow position:
               
chr23:1767661-1767959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
31, 147
               

               
Conread position:
               
137-514
               

               
Cow position:
               
chr23:34356468-34356853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
31, 146
               

               
Conread position:
               
138-440
               

               
Cow position:
               
chr23:7574800-7574496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
139-514
               

               
Cow position:
               
chr23:16744380-16744755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
140-512
               

               
Cow position:
               
chr23:35177154-35177512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
143-509
               

               
Cow position:
               
chr23:19774611-19774955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
25, 131
               

               
Conread position:
               
147-507
               

               
Cow position:
               
chr23:26050884-26051225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
148-337
               

               
Cow position:
               
chr23:3955254-3955444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 134
               

               
Conread position:
               
148-394
               

               
Cow position:
               
chr23:4329839-4329592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
14, 148
               

               
Conread position:
               
148-440
               

               
Cow position:
               
chr23:23113871-23114187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
148-456
               

               
Cow position:
               
chr23:13945871-13946183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
17, 117
               

               
Conread position:
               
150-500
               

               
Cow position:
               
chr23:35938191-35938526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
164-508
               

               
Cow position:
               
chr23:12363757-12363413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
87, 102
               

               
Conread position:
               
165-427
               

               
Cow position:
               
chr23:3409042-3408789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
215, 23
               

               
Conread position:
               
165-436
               

               
Cow position:
               
chr23:33622290-33622025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
165-510
               

               
Cow position:
               
chr23:35239208-35239559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
16, 115
               

               
Conread position:
               
165-512
               

               
Cow position:
               
chr23:22414431-22414099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
285, 23
               

               
Conread position:
               
167-396
               

               
Cow position:
               
chr23:349863-349639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
167-440
               

               
Cow position:
               
chr23:21502773-21502502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
167-440
               

               
Cow position:
               
chr23:30950824-30951084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
167-510
               

               
Cow position:
               
chr23:32480172-32479809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
171-514
               

               
Cow position:
               
chr23:5732418-5732748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
84, 98
               

               
Conread position:
               
172-504
               

               
Cow position:
               
chr23:9226143-9226476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
174-504
               

               
Cow position:
               
chr23:11081129-11081461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
174-508
               

               
Cow position:
               
chr23:18286069-18286389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
176-440
               

               
Cow position:
               
chr23:36172395-36172651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
177-500
               

               
Cow position:
               
chr23:5795352-5795674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 94
               

               
Conread position:
               
179-514
               

               
Cow position:
               
chr23:1438173-1438490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
182-441
               

               
Cow position:
               
chr23:39780637-39780884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
185-513
               

               
Cow position:
               
chr23:17484965-17484646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
186-439
               

               
Cow position:
               
chr23:39275774-39276024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
189-416
               

               
Cow position:
               
chr23:27529218-27528980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
189-437
               

               
Cow position:
               
chr23:306411-306648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
189-475
               

               
Cow position:
               
chr23:1701057-1701345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
189-500
               

               
Cow position:
               
chr23:16797923-16797613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
189-509
               

               
Cow position:
               
chr23:3522639-3522951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
189-511
               

               
Cow position:
               
chr23:307344-307668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
189-511
               

               
Cow position:
               
chr23:3245029-3244705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
189-511
               

               
Cow position:
               
chr23:5436754-5436431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
223, 60
               

               
Conread position:
               
192-510
               

               
Cow position:
               
chr23:22574027-22573698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 104
               

               
Conread position:
               
194-504
               

               
Cow position:
               
chr23:24685143-24685442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
230, 54
               

               
Conread position:
               
195-500
               

               
Cow position:
               
chr23:39573364-39573067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 26
               

               
Conread position:
               
195-512
               

               
Cow position:
               
chr23:1655787-1656104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
197-419
               

               
Cow position:
               
chr23:4795067-4795277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 70
               

               
Conread position:
               
203-507
               

               
Cow position:
               
chr23:769653-769336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
208-514
               

               
Cow position:
               
chr23:38732139-38732443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
43, 127
               

               
Conread position:
               
209-439
               

               
Cow position:
               
chr23:29069536-29069313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
215-509
               

               
Cow position:
               
chr23:20539295-20539586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
216-512
               

               
Cow position:
               
chr23:3293605-3293899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
217-511
               

               
Cow position:
               
chr23:17486912-17486618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
220-492
               

               
Cow position:
               
chr23:24701171-24700886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
220-501
               

               
Cow position:
               
chr23:283476-283203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 14
               

               
Conread position:
               
220-506
               

               
Cow position:
               
chr23:6035353-6035613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
224-437
               

               
Cow position:
               
chr23:21309491-21309287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
226-503
               

               
Cow position:
               
chr23:5881595-5881320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
229-427
               

               
Cow position:
               
chr23:35247292-35247483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
232-504
               

               
Cow position:
               
chr23:16961225-16961488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
233-513
               

               
Cow position:
               
chr23:5237500-5237228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
235-440
               

               
Cow position:
               
chr23:10876328-10876527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
236-514
               

               
Cow position:
               
chr23:18822925-18823196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
206, 35
               

               
Conread position:
               
239-513
               

               
Cow position:
               
chr23:19268985-19269257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
256-513
               

               
Cow position:
               
chr23:4003595-4003860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
268-511
               

               
Cow position:
               
chr23:1863431-1863669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
185, 105
               

               
Conread position:
               
271-440
               

               
Cow position:
               
chr23:3244504-3244340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
271-493
               

               
Cow position:
               
chr23:13202397-13202180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
204, 21
               

               
Conread position:
               
271-510
               

               
Cow position:
               
chr23:40995134-40995371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
156, 21
               

               
Conread position:
               
271-514
               

               
Cow position:
               
chr23:11212468-11212721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
157, 24
               

               
Conread position:
               
272-506
               

               
Cow position:
               
chr23:19565413-19565650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
158, 21
               

               
Conread position:
               
273-435
               

               
Cow position:
               
chr23:35369084-35368923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
273-441
               

               
Cow position:
               
chr23:348986-348817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
275-500
               

               
Cow position:
               
chr23:29479853-29480073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
138, 17
               

               
Conread position:
               
275-514
               

               
Cow position:
               
chr23:26825037-26825264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
154, 18
               

               
Conread position:
               
276-508
               

               
Cow position:
               
chr23:1981692-1981467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
152, 12
               

               
Conread position:
               
281-508
               

               
Cow position:
               
chr23:8698390-8698631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
283-514
               

               
Cow position:
               
chr23:23904355-23904134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
196, 9
               

               
Conread position:
               
284-507
               

               
Cow position:
               
chr23:28529974-28529746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
144, 8
               

               
Conread position:
               
285-514
               

               
Cow position:
               
chr23:14895701-14895476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
6, 154
               

               
Conread position:
               
287-512
               

               
Cow position:
               
chr23:40122538-40122761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
292-424
               

               
Cow position:
               
chr23:30655829-30655701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
292-440
               

               
Cow position:
               
chr23:13471134-13470987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
292-440
               

               
Cow position:
               
chr23:14569520-14569372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
292-440
               

               
Cow position:
               
chr23:21438474-21438626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
292-467
               

               
Cow position:
               
chr23:3835614-3835439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
157, 63
               

               
Conread position:
               
292-506
               

               
Cow position:
               
chr23:3234801-3234573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
121, 110
               

               
Conread position:
               
292-506
               

               
Cow position:
               
chr23:13137955-13137735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
100, 114
               

               
Conread position:
               
292-508
               

               
Cow position:
               
chr23:30311951-30311724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
292-510
               

               
Cow position:
               
chr23:7696539-7696749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
292-514
               

               
Cow position:
               
chr23:7709771-7709994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
185, 121
               

               
Conread position:
               
292-514
               

               
Cow position:
               
chr23:26283705-26283932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
147, 82
               

               
Conread position:
               
293-427
               

               
Cow position:
               
chr23:57182-57046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
293-438
               

               
Cow position:
               
chr23:4054199-4054343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
293-506
               

               
Cow position:
               
chr23:35656394-35656613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
136, 10
               

               
Conread position:
               
294-514
               

               
Cow position:
               
chr23:22238839-22238607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
134, 195
               

               
Conread position:
               
296-510
               

               
Cow position:
               
chr23:5799476-5799263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 105
               

               
Conread position:
               
297-508
               

               
Cow position:
               
chr23:1877910-1877691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
297-513
               

               
Cow position:
               
chr23:17597412-17597633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
110, 105
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr23:23197333-23197534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
298-514
               

               
Cow position:
               
chr23:1194505-1194283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
299-508
               

               
Cow position:
               
chr23:22272491-22272290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 129
               

               
Conread position:
               
300-507
               

               
Cow position:
               
chr23:17039540-17039334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
300-512
               

               
Cow position:
               
chr23:25968413-25968626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
113, 53
               

               
Conread position:
               
301-504
               

               
Cow position:
               
chr23:40081503-40081701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
172, 60
               

               
Conread position:
               
301-509
               

               
Cow position:
               
chr23:5785834-5786037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
302-508
               

               
Cow position:
               
chr23:35929941-35930154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
302-511
               

               
Cow position:
               
chr23:32621274-32621498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
303-495
               

               
Cow position:
               
chr23:5927624-5927429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
118, 66
               

               
Conread position:
               
303-506
               

               
Cow position:
               
chr23:5395484-5395279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
305-514
               

               
Cow position:
               
chr23:6179553-6179336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
306-514
               

               
Cow position:
               
chr23:27848991-27849205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
121, 178
               

               
Conread position:
               
307-501
               

               
Cow position:
               
chr23:12405824-12405622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
311-508
               

               
Cow position:
               
chr23:21423767-21423972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
313-507
               

               
Cow position:
               
chr23:1954281-1954479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 169
               

               
Conread position:
               
314-511
               

               
Cow position:
               
chr23:1798113-1798323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
97, 90
               

               
Conread position:
               
315-505
               

               
Cow position:
               
chr23:24809434-24809234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
315-511
               

               
Cow position:
               
chr23:38854586-38854379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
316-492
               

               
Cow position:
               
chr23:36022780-36022602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
318-508
               

               
Cow position:
               
chr23:17012732-17012536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
319-509
               

               
Cow position:
               
chr23:38993081-38992889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
322-493
               

               
Cow position:
               
chr23:14580760-14580931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
93, 85
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr23:22826430-22826253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
155, 107
               

               
Conread position:
               
327-503
               

               
Cow position:
               
chr23:16664387-16664202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
327-509
               

               
Cow position:
               
chr23:39248372-39248193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
102, 75
               

               
Conread position:
               
328-514
               

               
Cow position:
               
chr23:38267384-38267194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
331-509
               

               
Cow position:
               
chr23:1480659-1480849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
331-511
               

               
Cow position:
               
chr23:18417112-18417285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
331-514
               

               
Cow position:
               
chr23:1276873-1277056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
170, 146
               

               
Conread position:
               
331-514
               

               
Cow position:
               
chr23:11369248-11369433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
333-513
               

               
Cow position:
               
chr23:22668483-22668301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
333-514
               

               
Cow position:
               
chr23:26698450-26698270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 97
               

               
Conread position:
               
336-514
               

               
Cow position:
               
chr23:25933181-25933360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
17, 106
               

               
Conread position:
               
340-506
               

               
Cow position:
               
chr23:2457470-2457635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
342-489
               

               
Cow position:
               
chr23:61921-61775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 120
               

               
Conread position:
               
343-514
               

               
Cow position:
               
chr23:15056540-15056364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
344-511
               

               
Cow position:
               
chr23:15262611-15262789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
345-514
               

               
Cow position:
               
chr23:22654653-22654486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
132, 76
               

               
Conread position:
               
346-507
               

               
Cow position:
               
chr23:4042490-4042654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
346-514
               

               
Cow position:
               
chr23:11053859-11053686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 121
               

               
Conread position:
               
352-507
               

               
Cow position:
               
chr23:21664345-21664506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
371-506
               

               
Cow position:
               
chr23:22651466-22651603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
381-512
               

               
Cow position:
               
chr23:12080872-12081004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 51
               
Show alignments to all cow chromosomes.