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Cow genome map

           
Conread name:
           
mE6-MI-P-E6-acx-c-02-1-UM.s1
        

               
Conread position:
               
1-150
               

               
Cow position:
               
chr5:12557686-12557536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 138
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr5:60015642-60015823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
8, 76
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr5:54875956-54875728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr5:69099247-69099495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr5:28330608-28330367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr5:70102084-70101841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr5:44054314-44054068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr5:34915863-34916120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 122
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr5:26790723-26790469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr5:16184813-16185078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr5:39094274-39094546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 123
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr5:41523069-41522811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr5:42747883-42748148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
159, 34
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr5:21944102-21944389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr5:47313194-47313467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
12, 125
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr5:60519896-60520154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr5:36679725-36679440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 145
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr5:27015413-27015676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr5:21524885-21525168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
7, 139
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr5:34288746-34288471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr5:19470462-19470186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr5:50950274-50950555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 124
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr5:64392875-64393160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr5:75829010-75828738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr5:62107774-62107485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr5:23856442-23856141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 124
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr5:51357781-51357480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr5:59443530-59443219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr5:49558883-49559216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr5:64844396-64844083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 122
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr5:24485689-24485388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr5:62827034-62826703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr5:10261521-10261179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr5:5685338-5685000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 95
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr5:54405173-54404831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr5:56443002-56443350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr5:20555028-20554678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr5:13691855-13691489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr5:2918201-2918562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr5:31145061-31144698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr5:32153595-32153230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 139
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:5938045-5938412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:7397267-7397631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:7498239-7497867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:18557672-18557310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:26647439-26647814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
9, 138
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:34612519-34612890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 124
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:34709513-34709885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
7, 124
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:37586321-37585940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:45999300-45998931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
9, 96
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:47704414-47704036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 142
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:47750671-47751040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:51309688-51310060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:56234107-56233740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr5:59877017-59876643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr5:34887477-34887096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
7, 90
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr5:12149267-12149647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr5:20407942-20407566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr5:63964460-63964037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
9, 132
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr5:4218602-4218993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr5:5111356-5110930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 139
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr5:29771239-29771672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr5:6045007-6045441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 140
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr5:15478829-15479275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr5:28927876-28927444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr5:26094448-26094015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 124
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr5:41546169-41545741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr5:44752591-44752155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 161
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr5:46104219-46103808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
7, 128
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr5:7193153-7193587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 138
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr5:65752580-65753048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr5:64524158-64523654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
1-490
               

               
Cow position:
               
chr5:66815860-66815379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 145
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr5:14314243-14314738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr5:30276416-30276909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr5:39447814-39447303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 127
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr5:55756720-55756188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr5:35145071-35145561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr5:47871329-47870828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr5:29903801-29903315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr5:56523895-56524390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 111
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr5:18573891-18574411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr5:47601532-47602037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr5:74643940-74643455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 120
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr5:14904335-14903837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr5:17087309-17086788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr5:29827774-29828278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 123
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr5:30486972-30487457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr5:26990113-26990613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 167
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr5:21617176-21617687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 124
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr5:35826314-35826819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 29
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr5:65941532-65941018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr5:3582300-3582788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr5:53055832-53055325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 106
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr5:66972123-66972663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 309
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr5:45226108-45225591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 117
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr5:26467343-26467862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr5:15363614-15364106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr5:39936824-39937352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr5:42845879-42845361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 138
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr5:44796994-44796500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr5:55942677-55942152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 41
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr5:57935392-57934884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 37
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr5:59298237-59297996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr5:63917685-63917444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr5:58004966-58005231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr5:51315126-51314851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr5:20974724-20974443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 125
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr5:26561866-26562156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 132
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr5:3281146-3280867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr5:6130078-6130354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr5:61030507-61030224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
6, 123
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr5:33347987-33348249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr5:61839910-61840289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
2-400
               

               
Cow position:
               
chr5:14832882-14832503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr5:58793893-58793486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 268
               

               
Conread position:
               
2-440
               

               
Cow position:
               
chr5:9090298-9089876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
2-441
               

               
Cow position:
               
chr5:21040251-21039828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 30
               

               
Conread position:
               
2-443
               

               
Cow position:
               
chr5:67212103-67212515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
2-450
               

               
Cow position:
               
chr5:34183935-34184387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 129
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr5:72564481-72564938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
2-511
               

               
Cow position:
               
chr5:43923427-43922937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 209
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr5:64321472-64321995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr5:63840421-63840149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
3-377
               

               
Cow position:
               
chr5:44583393-44583023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
3-378
               

               
Cow position:
               
chr5:34506203-34505836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 121
               

               
Conread position:
               
3-440
               

               
Cow position:
               
chr5:4710418-4710000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
3-478
               

               
Cow position:
               
chr5:26377941-26377482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr5:12672297-12672063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
4-427
               

               
Cow position:
               
chr5:34528289-34528685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
4-505
               

               
Cow position:
               
chr5:30302623-30303108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 79
               

               
Conread position:
               
4-514
               

               
Cow position:
               
chr5:44848286-44847791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 44
               

               
Conread position:
               
6-509
               

               
Cow position:
               
chr5:17999769-17999264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 157
               

               
Conread position:
               
7-386
               

               
Cow position:
               
chr5:16508824-16509204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 102
               

               
Conread position:
               
7-415
               

               
Cow position:
               
chr5:15598506-15598111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 132
               

               
Conread position:
               
7-512
               

               
Cow position:
               
chr5:28224183-28224676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 69
               

               
Conread position:
               
8-396
               

               
Cow position:
               
chr5:33414676-33414303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 75
               

               
Conread position:
               
8-419
               

               
Cow position:
               
chr5:50821517-50821914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 104
               

               
Conread position:
               
8-433
               

               
Cow position:
               
chr5:20783355-20783766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
8-439
               

               
Cow position:
               
chr5:6504141-6503730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
8-507
               

               
Cow position:
               
chr5:14550857-14550353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
9-378
               

               
Cow position:
               
chr5:65601193-65601547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
9-435
               

               
Cow position:
               
chr5:44994305-44993902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 22
               

               
Conread position:
               
9-445
               

               
Cow position:
               
chr5:37377598-37378009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
10-186
               

               
Cow position:
               
chr5:50573488-50573664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
10-186
               

               
Cow position:
               
chr5:63967912-63967740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
10-236
               

               
Cow position:
               
chr5:15462456-15462672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
178, 20
               

               
Conread position:
               
10-236
               

               
Cow position:
               
chr5:59759124-59759342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr5:31469852-31469594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
10-266
               

               
Cow position:
               
chr5:72149982-72150236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
10-267
               

               
Cow position:
               
chr5:6986889-6987153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr5:65933197-65932930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 98
               

               
Conread position:
               
10-279
               

               
Cow position:
               
chr5:4507230-4506951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
10-279
               

               
Cow position:
               
chr5:6086831-6086557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
10-279
               

               
Cow position:
               
chr5:7921651-7921399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
10-287
               

               
Cow position:
               
chr5:12352051-12351784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
68, 105
               

               
Conread position:
               
10-344
               

               
Cow position:
               
chr5:54714011-54713675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
10-389
               

               
Cow position:
               
chr5:38853090-38853450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr5:65887283-65886908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
158, 261
               

               
Conread position:
               
10-398
               

               
Cow position:
               
chr5:40233868-40234230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 36
               

               
Conread position:
               
10-399
               

               
Cow position:
               
chr5:52645349-52644969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
10-426
               

               
Cow position:
               
chr5:68082229-68081835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
10-437
               

               
Cow position:
               
chr5:63987716-63987298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 113
               

               
Conread position:
               
10-439
               

               
Cow position:
               
chr5:3204569-3204977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
10-440
               

               
Cow position:
               
chr5:16206411-16206003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
10-440
               

               
Cow position:
               
chr5:53855435-53855858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 77
               

               
Conread position:
               
10-441
               

               
Cow position:
               
chr5:39258284-39258657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
184, 20
               

               
Conread position:
               
10-472
               

               
Cow position:
               
chr5:32378603-32379013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 26
               

               
Conread position:
               
10-501
               

               
Cow position:
               
chr5:4551863-4552358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
155, 239
               

               
Conread position:
               
10-506
               

               
Cow position:
               
chr5:47317237-47316747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 66
               

               
Conread position:
               
10-508
               

               
Cow position:
               
chr5:17027829-17028306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 68
               

               
Conread position:
               
10-508
               

               
Cow position:
               
chr5:24175102-24175581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
10-508
               

               
Cow position:
               
chr5:45845962-45845460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 41
               

               
Conread position:
               
10-508
               

               
Cow position:
               
chr5:62172137-62172628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 125
               

               
Conread position:
               
10-508
               

               
Cow position:
               
chr5:66366265-66366738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 20
               

               
Conread position:
               
10-510
               

               
Cow position:
               
chr5:46611353-46610885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 26
               

               
Conread position:
               
10-511
               

               
Cow position:
               
chr5:6528411-6528898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 227
               

               
Conread position:
               
10-512
               

               
Cow position:
               
chr5:9894396-9893891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 108
               

               
Conread position:
               
10-512
               

               
Cow position:
               
chr5:55176623-55177114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 38
               

               
Conread position:
               
10-513
               

               
Cow position:
               
chr5:34442062-34441565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
10-514
               

               
Cow position:
               
chr5:12323063-12322575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
10-514
               

               
Cow position:
               
chr5:43858697-43858182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 102
               

               
Conread position:
               
10-514
               

               
Cow position:
               
chr5:66338818-66339308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 22
               

               
Conread position:
               
11-495
               

               
Cow position:
               
chr5:42063935-42064424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 113
               

               
Conread position:
               
12-269
               

               
Cow position:
               
chr5:45705780-45706037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
60, 108
               

               
Conread position:
               
12-280
               

               
Cow position:
               
chr5:17631140-17630873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
12-427
               

               
Cow position:
               
chr5:27007629-27008032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 68
               

               
Conread position:
               
12-440
               

               
Cow position:
               
chr5:46510135-46509714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 194
               

               
Conread position:
               
12-507
               

               
Cow position:
               
chr5:27419988-27419518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
13-186
               

               
Cow position:
               
chr5:45192059-45191882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 111
               

               
Conread position:
               
13-504
               

               
Cow position:
               
chr5:47888981-47888504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 126
               

               
Conread position:
               
13-513
               

               
Cow position:
               
chr5:64139297-64139798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 128
               

               
Conread position:
               
16-267
               

               
Cow position:
               
chr5:3491938-3492185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
16-277
               

               
Cow position:
               
chr5:44703079-44703329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
16-377
               

               
Cow position:
               
chr5:48519369-48519727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 102
               

               
Conread position:
               
16-500
               

               
Cow position:
               
chr5:56467441-56467892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
460, 62
               

               
Conread position:
               
16-514
               

               
Cow position:
               
chr5:28946322-28945844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 108
               

               
Conread position:
               
17-201
               

               
Cow position:
               
chr5:23666524-23666336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
17-440
               

               
Cow position:
               
chr5:60715618-60715216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
17-500
               

               
Cow position:
               
chr5:27154760-27155224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
17-509
               

               
Cow position:
               
chr5:27103055-27102582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 112
               

               
Conread position:
               
17-512
               

               
Cow position:
               
chr5:56070591-56071091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
18-168
               

               
Cow position:
               
chr5:19751593-19751740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
18-371
               

               
Cow position:
               
chr5:34638624-34638967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
18-461
               

               
Cow position:
               
chr5:51502751-51503178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
62, 106
               

               
Conread position:
               
18-496
               

               
Cow position:
               
chr5:50599805-50600264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
106, 56
               

               
Conread position:
               
18-514
               

               
Cow position:
               
chr5:35208004-35208500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
19-246
               

               
Cow position:
               
chr5:37366630-37366868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
44, 130
               

               
Conread position:
               
19-508
               

               
Cow position:
               
chr5:41598966-41598501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
21-506
               

               
Cow position:
               
chr5:62870293-62869834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 64
               

               
Conread position:
               
22-487
               

               
Cow position:
               
chr5:26595360-26594909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
105, 47
               

               
Conread position:
               
22-514
               

               
Cow position:
               
chr5:12873487-12873988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
23-279
               

               
Cow position:
               
chr5:43474591-43474849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr5:61656351-61656572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 99
               

               
Conread position:
               
25-369
               

               
Cow position:
               
chr5:32140959-32140627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
25-379
               

               
Cow position:
               
chr5:50975633-50975993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
25-440
               

               
Cow position:
               
chr5:31640173-31640575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 114
               

               
Conread position:
               
26-509
               

               
Cow position:
               
chr5:67932716-67932235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 98
               

               
Conread position:
               
28-425
               

               
Cow position:
               
chr5:59326079-59325705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
164, 94
               

               
Conread position:
               
28-433
               

               
Cow position:
               
chr5:50533635-50533243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 96
               

               
Conread position:
               
28-507
               

               
Cow position:
               
chr5:52165433-52164944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 110
               

               
Conread position:
               
29-496
               

               
Cow position:
               
chr5:28302990-28302538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
30-427
               

               
Cow position:
               
chr5:65588463-65588841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 46
               

               
Conread position:
               
31-507
               

               
Cow position:
               
chr5:64176372-64175901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 111
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr5:32956335-32955985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
34-435
               

               
Cow position:
               
chr5:46323057-46322656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 105
               

               
Conread position:
               
34-506
               

               
Cow position:
               
chr5:41164844-41165310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
35-431
               

               
Cow position:
               
chr5:34232499-34232894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 92
               

               
Conread position:
               
35-438
               

               
Cow position:
               
chr5:4347955-4347554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
159, 40
               

               
Conread position:
               
36-438
               

               
Cow position:
               
chr5:67243681-67244068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
36-514
               

               
Cow position:
               
chr5:21828621-21829100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 87
               

               
Conread position:
               
37-246
               

               
Cow position:
               
chr5:48178918-48178710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
37-283
               

               
Cow position:
               
chr5:72310471-72310711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 103
               

               
Conread position:
               
37-337
               

               
Cow position:
               
chr5:34115420-34115702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
43, 81
               

               
Conread position:
               
37-432
               

               
Cow position:
               
chr5:51999977-52000362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 101
               

               
Conread position:
               
37-437
               

               
Cow position:
               
chr5:58855862-58856251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
37-439
               

               
Cow position:
               
chr5:43992083-43992475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
37-440
               

               
Cow position:
               
chr5:458230-458640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
37-440
               

               
Cow position:
               
chr5:26477235-26476866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
37-505
               

               
Cow position:
               
chr5:1247033-1247490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 87
               

               
Conread position:
               
37-513
               

               
Cow position:
               
chr5:35684692-35685168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
37-513
               

               
Cow position:
               
chr5:58144848-58144369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
38-499
               

               
Cow position:
               
chr5:16894017-16893557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 178
               

               
Conread position:
               
38-514
               

               
Cow position:
               
chr5:11668419-11667948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 84
               

               
Conread position:
               
40-440
               

               
Cow position:
               
chr5:65776625-65776232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
42, 99
               

               
Conread position:
               
41-249
               

               
Cow position:
               
chr5:6033000-6033204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
41-268
               

               
Cow position:
               
chr5:56433563-56433795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
41-273
               

               
Cow position:
               
chr5:43738186-43737958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
41-278
               

               
Cow position:
               
chr5:30639088-30638859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
153, 34
               

               
Conread position:
               
41-289
               

               
Cow position:
               
chr5:9859956-9859701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 97
               

               
Conread position:
               
41-355
               

               
Cow position:
               
chr5:2500419-2500112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
41-379
               

               
Cow position:
               
chr5:59438929-59439264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 83
               

               
Conread position:
               
41-426
               

               
Cow position:
               
chr5:13536919-13537270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
41-461
               

               
Cow position:
               
chr5:43929972-43929560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
41-497
               

               
Cow position:
               
chr5:30844874-30845325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
41-500
               

               
Cow position:
               
chr5:69337594-69338036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
41-508
               

               
Cow position:
               
chr5:38832879-38833344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 127
               

               
Conread position:
               
41-514
               

               
Cow position:
               
chr5:32975789-32975322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 97
               

               
Conread position:
               
43-246
               

               
Cow position:
               
chr5:68715597-68715796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
43-260
               

               
Cow position:
               
chr5:29504876-29505092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
84, 32
               

               
Conread position:
               
43-279
               

               
Cow position:
               
chr5:9083101-9083342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
43-318
               

               
Cow position:
               
chr5:10789915-10789637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
7, 97
               

               
Conread position:
               
43-428
               

               
Cow position:
               
chr5:6896374-6895987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
43-436
               

               
Cow position:
               
chr5:28229921-28230311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
43-437
               

               
Cow position:
               
chr5:55967119-55966734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
43-451
               

               
Cow position:
               
chr5:37646788-37646377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 98
               

               
Conread position:
               
43-506
               

               
Cow position:
               
chr5:53835479-53835949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
44-159
               

               
Cow position:
               
chr5:57890264-57890376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
44-229
               

               
Cow position:
               
chr5:2851079-2851268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 97
               

               
Conread position:
               
44-235
               

               
Cow position:
               
chr5:24642957-24642770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
44-260
               

               
Cow position:
               
chr5:72041988-72042206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
44-268
               

               
Cow position:
               
chr5:32963864-32963640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
89, 96
               

               
Conread position:
               
44-273
               

               
Cow position:
               
chr5:45036785-45037017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
44-276
               

               
Cow position:
               
chr5:33467277-33467043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 96
               

               
Conread position:
               
44-276
               

               
Cow position:
               
chr5:68604624-68604858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
198, 110
               

               
Conread position:
               
44-329
               

               
Cow position:
               
chr5:71504893-71505169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
44-415
               

               
Cow position:
               
chr5:40357106-40356720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 74
               

               
Conread position:
               
44-415
               

               
Cow position:
               
chr5:42744562-42744907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
44-425
               

               
Cow position:
               
chr5:37814388-37814763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
44-438
               

               
Cow position:
               
chr5:49685516-49685127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
44-439
               

               
Cow position:
               
chr5:34300690-34301069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
44-440
               

               
Cow position:
               
chr5:54311098-54311488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
44-475
               

               
Cow position:
               
chr5:54350596-54350176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
44-490
               

               
Cow position:
               
chr5:29353364-29352920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 65
               

               
Conread position:
               
44-493
               

               
Cow position:
               
chr5:17063329-17062864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
44-500
               

               
Cow position:
               
chr5:30253510-30253962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 53
               

               
Conread position:
               
44-507
               

               
Cow position:
               
chr5:40928208-40927785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
45-194
               

               
Cow position:
               
chr5:59450968-59450817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
123, 31
               

               
Conread position:
               
45-439
               

               
Cow position:
               
chr5:4032223-4031835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
45-457
               

               
Cow position:
               
chr5:68718649-68719037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
391, 75
               

               
Conread position:
               
45-510
               

               
Cow position:
               
chr5:24996458-24995989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
46-229
               

               
Cow position:
               
chr5:14703201-14703016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
34, 165
               

               
Conread position:
               
46-303
               

               
Cow position:
               
chr5:42777531-42777788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
46-317
               

               
Cow position:
               
chr5:56135202-56134935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
46-327
               

               
Cow position:
               
chr5:66831947-66831663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
46-419
               

               
Cow position:
               
chr5:15426295-15426669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
46-435
               

               
Cow position:
               
chr5:32339208-32338819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
46-464
               

               
Cow position:
               
chr5:6683581-6683193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
46-475
               

               
Cow position:
               
chr5:36854979-36855390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
46-510
               

               
Cow position:
               
chr5:72007086-72006649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
46-514
               

               
Cow position:
               
chr5:28324112-28324596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
47-357
               

               
Cow position:
               
chr5:21964059-21964358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
48-378
               

               
Cow position:
               
chr5:64137020-64137346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
48-451
               

               
Cow position:
               
chr5:12709655-12710043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
85, 90
               

               
Conread position:
               
48-496
               

               
Cow position:
               
chr5:20779611-20779181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
379, 26
               

               
Conread position:
               
48-503
               

               
Cow position:
               
chr5:11229905-11229446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 211
               

               
Conread position:
               
48-507
               

               
Cow position:
               
chr5:40388097-40387672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
48-512
               

               
Cow position:
               
chr5:7723441-7723878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
48-514
               

               
Cow position:
               
chr5:16938239-16937798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
49-284
               

               
Cow position:
               
chr5:1276705-1276458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 74
               

               
Conread position:
               
49-304
               

               
Cow position:
               
chr5:22102543-22102288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 90
               

               
Conread position:
               
49-504
               

               
Cow position:
               
chr5:57074565-57074111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 90
               

               
Conread position:
               
49-508
               

               
Cow position:
               
chr5:22243015-22242544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
49-512
               

               
Cow position:
               
chr5:36868515-36868971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
49-513
               

               
Cow position:
               
chr5:3771616-3772077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
50-228
               

               
Cow position:
               
chr5:54530753-54530932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 154
               

               
Conread position:
               
50-284
               

               
Cow position:
               
chr5:39710610-39710849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
50-373
               

               
Cow position:
               
chr5:46122578-46122268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
50-391
               

               
Cow position:
               
chr5:28926414-28926077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
50-400
               

               
Cow position:
               
chr5:32697042-32696711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
50-437
               

               
Cow position:
               
chr5:54086311-54086687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
138, 26
               

               
Conread position:
               
51-276
               

               
Cow position:
               
chr5:37064865-37065092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
51-414
               

               
Cow position:
               
chr5:19813440-19813094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
51-507
               

               
Cow position:
               
chr5:25900092-25899666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
51-514
               

               
Cow position:
               
chr5:71454824-71454395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
52-218
               

               
Cow position:
               
chr5:61455527-61455698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
52-281
               

               
Cow position:
               
chr5:16668350-16668564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
52-285
               

               
Cow position:
               
chr5:51490981-51490750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
52-373
               

               
Cow position:
               
chr5:56820487-56820179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
52-437
               

               
Cow position:
               
chr5:8821239-8820864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
52-501
               

               
Cow position:
               
chr5:37645846-37646298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 242
               

               
Conread position:
               
52-509
               

               
Cow position:
               
chr5:72895465-72895917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
53-337
               

               
Cow position:
               
chr5:18090501-18090787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
54-437
               

               
Cow position:
               
chr5:27306093-27306454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 157
               

               
Conread position:
               
54-440
               

               
Cow position:
               
chr5:25495563-25495206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
54-511
               

               
Cow position:
               
chr5:5257522-5257054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 136
               

               
Conread position:
               
55-398
               

               
Cow position:
               
chr5:37425519-37425853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 68
               

               
Conread position:
               
57-431
               

               
Cow position:
               
chr5:1950282-1949915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
57-504
               

               
Cow position:
               
chr5:56028752-56028319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 81
               

               
Conread position:
               
58-254
               

               
Cow position:
               
chr5:54111697-54111897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
58-446
               

               
Cow position:
               
chr5:741170-740788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
58-488
               

               
Cow position:
               
chr5:15722275-15721878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
58-508
               

               
Cow position:
               
chr5:23366988-23366558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
58-510
               

               
Cow position:
               
chr5:48757723-48758153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
58-512
               

               
Cow position:
               
chr5:16025682-16025249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
59-433
               

               
Cow position:
               
chr5:31434045-31434426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
59-512
               

               
Cow position:
               
chr5:2309785-2309324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 227
               

               
Conread position:
               
60-507
               

               
Cow position:
               
chr5:39442073-39442506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 65
               

               
Conread position:
               
61-424
               

               
Cow position:
               
chr5:62142452-62142812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
62-290
               

               
Cow position:
               
chr5:60126156-60126384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
63-347
               

               
Cow position:
               
chr5:49362207-49361933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
64-278
               

               
Cow position:
               
chr5:62027161-62026946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 59
               

               
Conread position:
               
64-508
               

               
Cow position:
               
chr5:8024407-8023985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 95
               

               
Conread position:
               
65-337
               

               
Cow position:
               
chr5:7140319-7140057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 58
               

               
Conread position:
               
65-509
               

               
Cow position:
               
chr5:35235923-35235456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
66-389
               

               
Cow position:
               
chr5:44049490-44049799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
127, 56
               

               
Conread position:
               
66-510
               

               
Cow position:
               
chr5:4280251-4280677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
67-413
               

               
Cow position:
               
chr5:57736906-57737224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
68-378
               

               
Cow position:
               
chr5:29212738-29213028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
73, 54
               

               
Conread position:
               
68-389
               

               
Cow position:
               
chr5:68265174-68264857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 72
               

               
Conread position:
               
68-511
               

               
Cow position:
               
chr5:11427452-11427002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 70
               

               
Conread position:
               
69-275
               

               
Cow position:
               
chr5:43395347-43395144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
69-378
               

               
Cow position:
               
chr5:47547926-47547633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
69-378
               

               
Cow position:
               
chr5:48154682-48154375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 70
               

               
Conread position:
               
69-415
               

               
Cow position:
               
chr5:45803851-45804186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
69-504
               

               
Cow position:
               
chr5:71494607-71495039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
69-510
               

               
Cow position:
               
chr5:26262883-26262453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
69-511
               

               
Cow position:
               
chr5:6572542-6572964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
69-512
               

               
Cow position:
               
chr5:40039980-40039555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 197
               

               
Conread position:
               
69-513
               

               
Cow position:
               
chr5:18898774-18899191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
69-514
               

               
Cow position:
               
chr5:35969333-35969776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 53
               

               
Conread position:
               
70-276
               

               
Cow position:
               
chr5:55821158-55821372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 68
               

               
Conread position:
               
70-285
               

               
Cow position:
               
chr5:57271473-57271257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
65, 50
               

               
Conread position:
               
71-510
               

               
Cow position:
               
chr5:51053855-51053416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 51
               

               
Conread position:
               
72-245
               

               
Cow position:
               
chr5:50870335-50870512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
76-506
               

               
Cow position:
               
chr5:50943357-50942932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
5, 63
               

               
Conread position:
               
78-274
               

               
Cow position:
               
chr5:1027892-1027695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
113, 59
               

               
Conread position:
               
79-269
               

               
Cow position:
               
chr5:35449054-35449239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
79-269
               

               
Cow position:
               
chr5:56518409-56518218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
79-277
               

               
Cow position:
               
chr5:8994765-8994568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 75
               

               
Conread position:
               
79-376
               

               
Cow position:
               
chr5:45409126-45409411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
79-408
               

               
Cow position:
               
chr5:9390336-9390677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
79-440
               

               
Cow position:
               
chr5:23169018-23168674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 43
               

               
Conread position:
               
79-440
               

               
Cow position:
               
chr5:64758963-64758617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 43
               

               
Conread position:
               
80-277
               

               
Cow position:
               
chr5:75230485-75230678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 55
               

               
Conread position:
               
81-487
               

               
Cow position:
               
chr5:69731320-69731693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
84-277
               

               
Cow position:
               
chr5:1678204-1678395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 39
               

               
Conread position:
               
84-504
               

               
Cow position:
               
chr5:44447081-44446649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 230
               

               
Conread position:
               
84-510
               

               
Cow position:
               
chr5:34561814-34562241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 54
               

               
Conread position:
               
85-492
               

               
Cow position:
               
chr5:22643411-22643033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
87-488
               

               
Cow position:
               
chr5:6286618-6286238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
88-435
               

               
Cow position:
               
chr5:4220790-4221124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 50
               

               
Conread position:
               
88-451
               

               
Cow position:
               
chr5:69461144-69461498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
89-278
               

               
Cow position:
               
chr5:48010036-48009846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 33
               

               
Conread position:
               
90-507
               

               
Cow position:
               
chr5:7044899-7044477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 50
               

               
Conread position:
               
92-430
               

               
Cow position:
               
chr5:62638719-62639046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 44
               

               
Conread position:
               
93-325
               

               
Cow position:
               
chr5:17644841-17644617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
93-513
               

               
Cow position:
               
chr5:68330168-68329773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
95-439
               

               
Cow position:
               
chr5:37808848-37808512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 27
               

               
Conread position:
               
95-505
               

               
Cow position:
               
chr5:34624785-34625175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
96-400
               

               
Cow position:
               
chr5:55928760-55929056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
31, 27
               

               
Conread position:
               
96-433
               

               
Cow position:
               
chr5:47323268-47323607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 191
               

               
Conread position:
               
96-445
               

               
Cow position:
               
chr5:57575583-57575930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 42
               

               
Conread position:
               
96-496
               

               
Cow position:
               
chr5:47696636-47696242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 149
               

               
Conread position:
               
97-268
               

               
Cow position:
               
chr5:39242371-39242207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
97-395
               

               
Cow position:
               
chr5:71722879-71723182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 174
               

               
Conread position:
               
97-510
               

               
Cow position:
               
chr5:34977021-34976608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
100-511
               

               
Cow position:
               
chr5:44028480-44028078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
100-513
               

               
Cow position:
               
chr5:3668719-3669110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 135
               

               
Conread position:
               
103-388
               

               
Cow position:
               
chr5:69520715-69520991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 35
               

               
Conread position:
               
103-514
               

               
Cow position:
               
chr5:45472090-45472510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
110-447
               

               
Cow position:
               
chr5:30950088-30949756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
113-495
               

               
Cow position:
               
chr5:39874955-39875322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
25, 146
               

               
Conread position:
               
113-510
               

               
Cow position:
               
chr5:35459459-35459063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
114-279
               

               
Cow position:
               
chr5:44849892-44849726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
117-440
               

               
Cow position:
               
chr5:45574460-45574772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
131, 34
               

               
Conread position:
               
118-443
               

               
Cow position:
               
chr5:46426015-46425701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
50, 122
               

               
Conread position:
               
121-512
               

               
Cow position:
               
chr5:42050386-42050778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
24, 158
               

               
Conread position:
               
122-504
               

               
Cow position:
               
chr5:54060113-54060492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 156
               

               
Conread position:
               
123-430
               

               
Cow position:
               
chr5:31923222-31923515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
123-486
               

               
Cow position:
               
chr5:41713150-41713496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
123-492
               

               
Cow position:
               
chr5:45397419-45397779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
45, 120
               

               
Conread position:
               
123-505
               

               
Cow position:
               
chr5:30629317-30628926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 144
               

               
Conread position:
               
123-508
               

               
Cow position:
               
chr5:41452826-41452461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
123-513
               

               
Cow position:
               
chr5:16214528-16214916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 77
               

               
Conread position:
               
124-500
               

               
Cow position:
               
chr5:72951681-72952046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 162
               

               
Conread position:
               
125-268
               

               
Cow position:
               
chr5:71579016-71579166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
125-494
               

               
Cow position:
               
chr5:59115223-59115582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 161
               

               
Conread position:
               
126-411
               

               
Cow position:
               
chr5:67540360-67540078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
126-510
               

               
Cow position:
               
chr5:56014578-56014954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
127-400
               

               
Cow position:
               
chr5:65883931-65883660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 127
               

               
Conread position:
               
128-510
               

               
Cow position:
               
chr5:55955760-55956142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
129-276
               

               
Cow position:
               
chr5:31020286-31020138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
129-511
               

               
Cow position:
               
chr5:35247264-35246873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr5:12761265-12760898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
133-506
               

               
Cow position:
               
chr5:29844134-29844489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
135-343
               

               
Cow position:
               
chr5:51801117-51800917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 131
               

               
Conread position:
               
136-442
               

               
Cow position:
               
chr5:14629959-14629653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
32, 138
               

               
Conread position:
               
136-444
               

               
Cow position:
               
chr5:65967874-65967575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
137-279
               

               
Cow position:
               
chr5:53146028-53145884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 58
               

               
Conread position:
               
137-325
               

               
Cow position:
               
chr5:19078973-19079166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
137-354
               

               
Cow position:
               
chr5:29980127-29979916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
137-365
               

               
Cow position:
               
chr5:21920226-21920457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
24, 151
               

               
Conread position:
               
137-512
               

               
Cow position:
               
chr5:29097218-29097597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
142-512
               

               
Cow position:
               
chr5:19335926-19335542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
146-412
               

               
Cow position:
               
chr5:21535246-21534987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
146-510
               

               
Cow position:
               
chr5:57101912-57101565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
146-511
               

               
Cow position:
               
chr5:18288993-18289352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
147-435
               

               
Cow position:
               
chr5:54768045-54767762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
22, 127
               

               
Conread position:
               
148-278
               

               
Cow position:
               
chr5:19294620-19294487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
148-436
               

               
Cow position:
               
chr5:14473547-14473255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
149-504
               

               
Cow position:
               
chr5:23529406-23529076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
150-441
               

               
Cow position:
               
chr5:45273633-45273349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
150-468
               

               
Cow position:
               
chr5:76366419-76366116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
151-442
               

               
Cow position:
               
chr5:63427137-63426849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 114
               

               
Conread position:
               
154-432
               

               
Cow position:
               
chr5:3639616-3639353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
154-504
               

               
Cow position:
               
chr5:49474670-49474328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
155-430
               

               
Cow position:
               
chr5:60747403-60747139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 117
               

               
Conread position:
               
162-514
               

               
Cow position:
               
chr5:60016050-60016400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
89, 103
               

               
Conread position:
               
165-437
               

               
Cow position:
               
chr5:56680133-56680405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
165-440
               

               
Cow position:
               
chr5:49440986-49440724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
165-456
               

               
Cow position:
               
chr5:53710808-53710521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
165-505
               

               
Cow position:
               
chr5:12901801-12902146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 100
               

               
Conread position:
               
165-508
               

               
Cow position:
               
chr5:16179639-16179293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 55
               

               
Conread position:
               
166-442
               

               
Cow position:
               
chr5:13717684-13717417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 110
               

               
Conread position:
               
166-498
               

               
Cow position:
               
chr5:4927680-4927359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
167-412
               

               
Cow position:
               
chr5:6891130-6890898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 103
               

               
Conread position:
               
167-438
               

               
Cow position:
               
chr5:58446691-58446956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
84, 109
               

               
Conread position:
               
167-514
               

               
Cow position:
               
chr5:42670968-42670637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
171-439
               

               
Cow position:
               
chr5:35125946-35126206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
81, 8
               

               
Conread position:
               
171-440
               

               
Cow position:
               
chr5:23678812-23678551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
171-461
               

               
Cow position:
               
chr5:60183693-60183981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
171-507
               

               
Cow position:
               
chr5:14921038-14920697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
245, 92
               

               
Conread position:
               
174-495
               

               
Cow position:
               
chr5:53946790-53947116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 99
               

               
Conread position:
               
175-438
               

               
Cow position:
               
chr5:54375611-54375352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 109
               

               
Conread position:
               
175-514
               

               
Cow position:
               
chr5:12557396-12557051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
176-440
               

               
Cow position:
               
chr5:64592197-64591943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
176-514
               

               
Cow position:
               
chr5:36039107-36038769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
178-440
               

               
Cow position:
               
chr5:41293979-41294233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
180-440
               

               
Cow position:
               
chr5:55019194-55019445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 72
               

               
Conread position:
               
188-440
               

               
Cow position:
               
chr5:66551990-66551744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
188-447
               

               
Cow position:
               
chr5:59873182-59872921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 90
               

               
Conread position:
               
188-493
               

               
Cow position:
               
chr5:17555121-17554820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
163, 8
               

               
Conread position:
               
189-440
               

               
Cow position:
               
chr5:63234919-63234676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
189-503
               

               
Cow position:
               
chr5:59384780-59384461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
224, 62
               

               
Conread position:
               
189-505
               

               
Cow position:
               
chr5:50575695-50575995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
189-514
               

               
Cow position:
               
chr5:30805077-30805385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr5:65140200-65140537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 45
               

               
Conread position:
               
195-514
               

               
Cow position:
               
chr5:28035656-28035959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
196-514
               

               
Cow position:
               
chr5:50713854-50713514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 75
               

               
Conread position:
               
197-494
               

               
Cow position:
               
chr5:45420220-45419930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 80
               

               
Conread position:
               
197-504
               

               
Cow position:
               
chr5:43402818-43403135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
58, 86
               

               
Conread position:
               
200-514
               

               
Cow position:
               
chr5:19752226-19752537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
205-506
               

               
Cow position:
               
chr5:6439107-6438798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
210-510
               

               
Cow position:
               
chr5:59627042-59626740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
45, 5
               

               
Conread position:
               
215-419
               

               
Cow position:
               
chr5:1461023-1461220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
219-511
               

               
Cow position:
               
chr5:63831867-63832150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
220-506
               

               
Cow position:
               
chr5:29515555-29515297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
222-505
               

               
Cow position:
               
chr5:63627582-63627313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
199, 49
               

               
Conread position:
               
222-513
               

               
Cow position:
               
chr5:61455788-61456077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
223-475
               

               
Cow position:
               
chr5:55796017-55795775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
138, 26
               

               
Conread position:
               
226-469
               

               
Cow position:
               
chr5:57156367-57156132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
229-504
               

               
Cow position:
               
chr5:15470882-15471144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
232-440
               

               
Cow position:
               
chr5:58555093-58555291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
190, 15
               

               
Conread position:
               
237-505
               

               
Cow position:
               
chr5:40237171-40237415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
239-500
               

               
Cow position:
               
chr5:18062375-18062088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
240-433
               

               
Cow position:
               
chr5:49501861-49501679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
240-512
               

               
Cow position:
               
chr5:50871764-50872046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
250-440
               

               
Cow position:
               
chr5:61875515-61875689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
250-447
               

               
Cow position:
               
chr5:57230367-57230178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
178, 21
               

               
Conread position:
               
250-514
               

               
Cow position:
               
chr5:26549169-26548907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
171, 28
               

               
Conread position:
               
251-514
               

               
Cow position:
               
chr5:57101552-57101290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
174, 20
               

               
Conread position:
               
252-509
               

               
Cow position:
               
chr5:57686766-57686512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
176, 35
               

               
Conread position:
               
262-504
               

               
Cow position:
               
chr5:17104829-17105071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
176, 29
               

               
Conread position:
               
271-439
               

               
Cow position:
               
chr5:49342065-49341898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
271-484
               

               
Cow position:
               
chr5:17602216-17602007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
188, 21
               

               
Conread position:
               
271-492
               

               
Cow position:
               
chr5:72006507-72006283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
271-513
               

               
Cow position:
               
chr5:20288278-20288023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
272-478
               

               
Cow position:
               
chr5:56334522-56334321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
203, 16
               

               
Conread position:
               
273-507
               

               
Cow position:
               
chr5:51298727-51298486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
274-501
               

               
Cow position:
               
chr5:60523721-60523950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
276-511
               

               
Cow position:
               
chr5:52001635-52001390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
150, 210
               

               
Conread position:
               
281-510
               

               
Cow position:
               
chr5:52852964-52853199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
281-514
               

               
Cow position:
               
chr5:57489951-57489720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
283-440
               

               
Cow position:
               
chr5:9369274-9369119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
283-440
               

               
Cow position:
               
chr5:69636220-69636376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
283-512
               

               
Cow position:
               
chr5:69383251-69383485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
133, 9
               

               
Conread position:
               
283-513
               

               
Cow position:
               
chr5:30561927-30562163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
283-514
               

               
Cow position:
               
chr5:57062534-57062292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
283-514
               

               
Cow position:
               
chr5:65679974-65679742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
286-514
               

               
Cow position:
               
chr5:33273693-33273933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
292-415
               

               
Cow position:
               
chr5:45574361-45574238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
292-439
               

               
Cow position:
               
chr5:9170577-9170433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
292-439
               

               
Cow position:
               
chr5:44726330-44726182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
292-440
               

               
Cow position:
               
chr5:51490241-51490095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
137, 38
               

               
Conread position:
               
292-440
               

               
Cow position:
               
chr5:55129347-55129495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
292-493
               

               
Cow position:
               
chr5:48867460-48867255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
292-500
               

               
Cow position:
               
chr5:48918814-48919020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
185, 9
               

               
Conread position:
               
292-505
               

               
Cow position:
               
chr5:67634513-67634281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
292-506
               

               
Cow position:
               
chr5:2469203-2468984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 143
               

               
Conread position:
               
292-507
               

               
Cow position:
               
chr5:59627104-59627320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
168, 188
               

               
Conread position:
               
292-508
               

               
Cow position:
               
chr5:6520015-6520236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 110
               

               
Conread position:
               
292-510
               

               
Cow position:
               
chr5:36838964-36839179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
185, 118
               

               
Conread position:
               
292-510
               

               
Cow position:
               
chr5:61049336-61049567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 112
               

               
Conread position:
               
292-511
               

               
Cow position:
               
chr5:50101372-50101144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
292-512
               

               
Cow position:
               
chr5:22795221-22795440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
157, 60
               

               
Conread position:
               
292-513
               

               
Cow position:
               
chr5:56613560-56613328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
292-514
               

               
Cow position:
               
chr5:3743326-3743563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
292-514
               

               
Cow position:
               
chr5:11562719-11562492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
292-514
               

               
Cow position:
               
chr5:50824596-50824819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
184, 137
               

               
Conread position:
               
293-443
               

               
Cow position:
               
chr5:1396605-1396755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
144, 114
               

               
Conread position:
               
293-447
               

               
Cow position:
               
chr5:64027014-64026860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
293-506
               

               
Cow position:
               
chr5:56860452-56860671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 70
               

               
Conread position:
               
293-514
               

               
Cow position:
               
chr5:52108263-52108023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
130, 101
               

               
Conread position:
               
294-510
               

               
Cow position:
               
chr5:7177157-7177385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
294-511
               

               
Cow position:
               
chr5:39035786-39036015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
135, 108
               

               
Conread position:
               
294-513
               

               
Cow position:
               
chr5:34915047-34914819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
296-440
               

               
Cow position:
               
chr5:26723456-26723600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
138, 84
               

               
Conread position:
               
296-489
               

               
Cow position:
               
chr5:38717318-38717506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
181, 47
               

               
Conread position:
               
296-505
               

               
Cow position:
               
chr5:60948141-60948359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
296-508
               

               
Cow position:
               
chr5:4267678-4267890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
181, 128
               

               
Conread position:
               
296-511
               

               
Cow position:
               
chr5:2827382-2827609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
116, 59
               

               
Conread position:
               
296-511
               

               
Cow position:
               
chr5:5016437-5016656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
132, 48
               

               
Conread position:
               
296-511
               

               
Cow position:
               
chr5:46023057-46022825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
51, 187
               

               
Conread position:
               
296-511
               

               
Cow position:
               
chr5:46129661-46129434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 182
               

               
Conread position:
               
297-400
               

               
Cow position:
               
chr5:41129751-41129854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
297-509
               

               
Cow position:
               
chr5:65050202-65049991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
298-507
               

               
Cow position:
               
chr5:73168001-73167785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
300-510
               

               
Cow position:
               
chr5:21531092-21530897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
301-440
               

               
Cow position:
               
chr5:35647356-35647495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
303-508
               

               
Cow position:
               
chr5:26147606-26147818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 198
               

               
Conread position:
               
303-508
               

               
Cow position:
               
chr5:65552696-65552491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
127, 72
               

               
Conread position:
               
303-512
               

               
Cow position:
               
chr5:47743643-47743853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
306-440
               

               
Cow position:
               
chr5:54436774-54436905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
307-513
               

               
Cow position:
               
chr5:54312620-54312834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
122, 194
               

               
Conread position:
               
309-513
               

               
Cow position:
               
chr5:57497406-57497191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
311-485
               

               
Cow position:
               
chr5:25597856-25598036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
117, 23
               

               
Conread position:
               
311-494
               

               
Cow position:
               
chr5:51233996-51233808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
311-505
               

               
Cow position:
               
chr5:35190133-35190333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
311-505
               

               
Cow position:
               
chr5:53145729-53145540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
162, 121
               

               
Conread position:
               
311-508
               

               
Cow position:
               
chr5:37842256-37842049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
312-492
               

               
Cow position:
               
chr5:38040540-38040354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
313-440
               

               
Cow position:
               
chr5:51490577-51490450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
314-500
               

               
Cow position:
               
chr5:36822913-36823091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
315-499
               

               
Cow position:
               
chr5:44734698-44734506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
315-503
               

               
Cow position:
               
chr5:61580309-61580505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 26
               

               
Conread position:
               
316-493
               

               
Cow position:
               
chr5:16668725-16668908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
316-507
               

               
Cow position:
               
chr5:694892-695083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
316-511
               

               
Cow position:
               
chr5:49821456-49821664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
319-505
               

               
Cow position:
               
chr5:19079283-19079470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 69
               

               
Conread position:
               
322-514
               

               
Cow position:
               
chr5:21003350-21003535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
323-501
               

               
Cow position:
               
chr5:51125974-51125796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
175, 109
               

               
Conread position:
               
323-505
               

               
Cow position:
               
chr5:12562725-12562533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
323-512
               

               
Cow position:
               
chr5:7676120-7675924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
328-512
               

               
Cow position:
               
chr5:56433921-56434117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
328-513
               

               
Cow position:
               
chr5:6876928-6876731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 181
               

               
Conread position:
               
330-505
               

               
Cow position:
               
chr5:56327679-56327499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 152
               

               
Conread position:
               
331-454
               

               
Cow position:
               
chr5:29979915-29979790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
331-506
               

               
Cow position:
               
chr5:4864586-4864765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
112, 71
               

               
Conread position:
               
334-474
               

               
Cow position:
               
chr5:65745719-65745574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
340-507
               

               
Cow position:
               
chr5:52029459-52029631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
340-511
               

               
Cow position:
               
chr5:34918398-34918576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
340-512
               

               
Cow position:
               
chr5:22186470-22186640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
90, 114
               

               
Conread position:
               
340-512
               

               
Cow position:
               
chr5:58401621-58401799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
340-514
               

               
Cow position:
               
chr5:37253481-37253659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
343-503
               

               
Cow position:
               
chr5:70591609-70591767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 133
               

               
Conread position:
               
343-511
               

               
Cow position:
               
chr5:71387256-71387432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
343-514
               

               
Cow position:
               
chr5:29599491-29599316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
344-493
               

               
Cow position:
               
chr5:42752960-42753111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 89
               

               
Conread position:
               
344-504
               

               
Cow position:
               
chr5:29010312-29010473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
344-513
               

               
Cow position:
               
chr5:45436440-45436264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 131
               

               
Conread position:
               
348-514
               

               
Cow position:
               
chr5:22957470-22957639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
350-506
               

               
Cow position:
               
chr5:12668922-12668764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 47
               

               
Conread position:
               
350-510
               

               
Cow position:
               
chr5:12478896-12478741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
350-514
               

               
Cow position:
               
chr5:8136533-8136695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 86
               

               
Conread position:
               
360-508
               

               
Cow position:
               
chr5:12504718-12504564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
361-510
               

               
Cow position:
               
chr5:64061092-64061245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
369-512
               

               
Cow position:
               
chr5:22923498-22923638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
371-507
               

               
Cow position:
               
chr5:29213244-29213375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
374-506
               

               
Cow position:
               
chr5:70545208-70545076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
382-514
               

               
Cow position:
               
chr5:63004349-63004483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               
Show alignments to all cow chromosomes.