Cow genome map


           Conread name:
           mE6-MI-P-E6-ahk-h-08-1-UM.s1
        

               Conread position:
               113-465
               

               Cow position:
               chr5:47894277-47893920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 6
               

               Conread position:
               114-460
               

               Cow position:
               chr5:51335983-51335646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               127-465
               

               Cow position:
               chr5:73489280-73488938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               68, 119
               

               Conread position:
               139-454
               

               Cow position:
               chr5:35526101-35526410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 135
               

               Conread position:
               139-465
               

               Cow position:
               chr5:32154610-32154282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               102, 23
               

               Conread position:
               142-465
               

               Cow position:
               chr5:2914740-2915069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               53, 194
               

               Conread position:
               203-454
               

               Cow position:
               chr5:53005996-53006249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               118, 13
               

               Conread position:
               333-457
               

               Cow position:
               chr5:33187263-33187381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               8, 0
               
Show alignments to all cow chromosomes.