Cow genome map


           Conread name:
           mE6-MI-P-E6-ahp-g-10-1-UM.s1
        

               Conread position:
               1-452
               

               Cow position:
               chr5:26058237-26057767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               152, 25
               

               Conread position:
               2-399
               

               Cow position:
               chr5:52605510-52605931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               286
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               125, 23
               

               Conread position:
               2-407
               

               Cow position:
               chr5:40897236-40897650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 25
               

               Conread position:
               12-135
               

               Cow position:
               chr5:57613954-57614078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               115, 17
               

               Conread position:
               19-201
               

               Cow position:
               chr5:70607411-70607225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               108, 98
               

               Conread position:
               19-399
               

               Cow position:
               chr5:13702156-13701761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               128, 9
               

               Conread position:
               20-430
               

               Cow position:
               chr5:3252059-3252480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               34-407
               

               Cow position:
               chr5:54622701-54622305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               194-399
               

               Cow position:
               chr5:42043799-42043587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               112, 145
               

               Conread position:
               197-369
               

               Cow position:
               chr5:34472274-34472445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               113, 50
               

               Conread position:
               225-407
               

               Cow position:
               chr5:34146059-34146247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               146, 80
               
Show alignments to all cow chromosomes.