Cow genome map


           Conread name:
           mE7-MI-P-E7-agm-a-04-1-UM.s1
        

               Conread position:
               338-576
               

               Cow position:
               chr1:29871681-29871916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 57
               

               Conread position:
               366-629
               

               Cow position:
               chr1:62798019-62797760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 78
               

               Conread position:
               370-629
               

               Cow position:
               chr1:44202754-44203005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               49, 210
               

               Conread position:
               375-629
               

               Cow position:
               chr1:78942832-78943095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               418-576
               

               Cow position:
               chr1:26439851-26440011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               434-626
               

               Cow position:
               chr1:73255371-73255563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               151, 28
               

               Conread position:
               451-629
               

               Cow position:
               chr1:86999854-87000033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               452-624
               

               Cow position:
               chr1:80616532-80616704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               129, 82
               

               Conread position:
               490-623
               

               Cow position:
               chr1:99303183-99303315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               99, 0
               
Show alignments to all cow chromosomes.