Cow genome map
Conread name: | mE7-MI-P-E7-aia-b-08-1-UM.s1 |
Conread position: | 106-241 |
Cow position: | chr12:28004918-28005049 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 133, 75 |
Conread position: | 106-286 |
Cow position: | chr12:6405651-6405470 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 135 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 40, 169 |
Conread position: | 106-599 |
Cow position: | chr12:21198953-21199445 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 115 |
Conread position: | 106-602 |
Cow position: | chr12:22204751-22204254 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 165 |
Conread position: | 111-274 |
Cow position: | chr12:25100077-25099912 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 116 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 114-602 |
Cow position: | chr12:349361-349859 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 88 |
Conread position: | 115-284 |
Cow position: | chr12:23141195-23141020 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 127 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 18, 110 |
Conread position: | 115-291 |
Cow position: | chr12:37560008-37560184 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 131 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 44, 106 |
Conread position: | 116-257 |
Cow position: | chr12:32677934-32677794 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 106 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 43, 23 |
Conread position: | 119-271 |
Cow position: | chr12:48471872-48471721 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 121 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 39, 20 |
Conread position: | 127-528 |
Cow position: | chr12:11580775-11581189 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 288 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 30, 51 |
Conread position: | 135-271 |
Cow position: | chr12:1870323-1870464 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 111 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 13, 54 |
Conread position: | 201-560 |
Cow position: | chr12:1478182-1477826 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 241 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 30, 14 |
Conread position: | 204-603 |
Cow position: | chr12:8139061-8138679 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 266 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 42, 93 |
Conread position: | 205-592 |
Cow position: | chr12:8677047-8676650 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 274 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 22, 145 |
Conread position: | 234-600 |
Cow position: | chr12:1403580-1403960 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 270 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 145, 68 |
Conread position: | 235-601 |
Cow position: | chr12:1888470-1888101 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 263 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 131, 7 |
Conread position: | 237-589 |
Cow position: | chr12:23141103-23140740 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 258 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 16, 23 |
Conread position: | 237-598 |
Cow position: | chr12:25099983-25099614 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 66 |
Conread position: | 237-599 |
Cow position: | chr12:27854874-27854507 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 44 |
Conread position: | 237-601 |
Cow position: | chr12:6405552-6405178 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 66 |
Conread position: | 237-601 |
Cow position: | chr12:11099312-11099684 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 66 |
Conread position: | 237-601 |
Cow position: | chr12:27931814-27931451 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 66 |
Conread position: | 237-601 |
Cow position: | chr12:31202399-31202030 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 266 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 16, 66 |
Conread position: | 237-601 |
Cow position: | chr12:42858447-42858078 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 66 |
Conread position: | 242-601 |
Cow position: | chr12:3362035-3362399 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 260 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 137, 60 |
Conread position: | 263-595 |
Cow position: | chr12:35345659-35345989 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 87 |
Conread position: | 279-594 |
Cow position: | chr12:3505127-3505436 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 218 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 118, 52 |
Conread position: | 281-562 |
Cow position: | chr12:20843752-20844022 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 205 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 95, 21 |
Conread position: | 281-591 |
Cow position: | chr12:20996947-20996638 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 227 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 100, 21 |
Conread position: | 284-592 |
Cow position: | chr12:18465089-18465370 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 219 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 284-594 |
Cow position: | chr12:21942874-21943187 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 64 |
Conread position: | 284-597 |
Cow position: | chr12:48471743-48471429 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 61 |
Conread position: | 288-591 |
Cow position: | chr12:21209797-21210112 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 234 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 44, 15 |
Conread position: | 289-599 |
Cow position: | chr12:1776825-1776503 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 231 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 90, 55 |
Conread position: | 297-589 |
Cow position: | chr12:28005054-28005331 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 211 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 82, 50 |
Conread position: | 297-591 |
Cow position: | chr12:23161779-23161467 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 221 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 82, 42 |
Conread position: | 297-595 |
Cow position: | chr12:7863723-7863425 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 198 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 47, 86 |
Conread position: | 313-601 |
Cow position: | chr12:14661184-14660892 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 218 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 66, 31 |
Conread position: | 356-591 |
Cow position: | chr12:21429213-21429456 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 173 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 51, 26 |
Conread position: | 362-583 |
Cow position: | chr12:19870122-19870342 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 174 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 17, 53 |
Conread position: | 382-602 |
Cow position: | chr12:32677736-32677524 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 168 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 71, 31 |
Conread position: | 383-598 |
Cow position: | chr12:20430557-20430775 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 160 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 30, 125 |
Conread position: | 387-592 |
Cow position: | chr12:34174359-34174565 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 161 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 42, 26 |
Conread position: | 435-601 |
Cow position: | chr12:20461775-20461935 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 131 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 19, 70 |
Show alignments to all cow chromosomes.