Cow genome map
| Conread name: | mE7-MI-P-E7-aia-b-08-1-UM.s1 |
| Conread position: | 106-274 |
| Cow position: | chr27:9992206-9992036 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 106-274 |
| Cow position: | chr27:15636353-15636183 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 114-270 |
| Cow position: | chr27:11486315-11486471 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 41, 145 |
| Conread position: | 114-314 |
| Cow position: | chr27:21286891-21286685 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 115-269 |
| Cow position: | chr27:30273201-30273044 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 109 |
| Conread position: | 115-279 |
| Cow position: | chr27:15036591-15036424 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 118-281 |
| Cow position: | chr27:6010342-6010506 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 129-271 |
| Cow position: | chr27:16551667-16551814 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 157-283 |
| Cow position: | chr27:15275017-15274890 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 230-592 |
| Cow position: | chr27:1677496-1677122 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 271 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 237-489 |
| Cow position: | chr27:14459354-14459088 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 237-591 |
| Cow position: | chr27:26554305-26553976 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 237-599 |
| Cow position: | chr27:27664093-27664454 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 267 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 237-601 |
| Cow position: | chr27:15636254-15635883 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 237-602 |
| Cow position: | chr27:9992107-9991749 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 237-602 |
| Cow position: | chr27:13898414-13898776 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 237-603 |
| Cow position: | chr27:3234443-3234063 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 239-601 |
| Cow position: | chr27:26326168-26326520 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 14, 65 |
| Conread position: | 251-590 |
| Cow position: | chr27:16033298-16032955 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 123, 51 |
| Conread position: | 263-596 |
| Cow position: | chr27:15274950-15274612 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 85 |
| Conread position: | 272-591 |
| Cow position: | chr27:7419857-7420173 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 281-592 |
| Cow position: | chr27:25803555-25803245 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 281-601 |
| Cow position: | chr27:19259834-19260157 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 284-591 |
| Cow position: | chr27:4980510-4980820 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 284-601 |
| Cow position: | chr27:9330872-9331193 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 286-601 |
| Cow position: | chr27:1210493-1210815 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 298-563 |
| Cow position: | chr27:16552021-16552286 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 82, 46 |
| Conread position: | 298-599 |
| Cow position: | chr27:21335091-21335388 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 92, 43 |
| Conread position: | 298-603 |
| Cow position: | chr27:16611812-16611504 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 81, 60 |
| Conread position: | 303-570 |
| Cow position: | chr27:30911391-30911660 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 75, 41 |
| Conread position: | 354-590 |
| Cow position: | chr27:167703-167478 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 354-591 |
| Cow position: | chr27:28079620-28079866 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 26, 162 |
| Conread position: | 362-600 |
| Cow position: | chr27:12748242-12748495 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 18, 158 |
| Conread position: | 364-591 |
| Cow position: | chr27:798346-798118 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 384-590 |
| Cow position: | chr27:1575836-1576045 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 123 |
| Conread position: | 440-600 |
| Cow position: | chr27:19524852-19525012 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 14, 65 |
Show alignments to all cow chromosomes.