Cow genome map
Conread name: | mE7-MI-P-E7-aia-b-08-1-UM.s1 |
Conread position: | 106-265 |
Cow position: | chr28:8719907-8719746 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 43, 116 |
Conread position: | 106-265 |
Cow position: | chr28:10072314-10072473 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 112 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 106-274 |
Cow position: | chr28:1386359-1386188 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 124 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 52, 33 |
Conread position: | 106-286 |
Cow position: | chr28:7788855-7788678 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 132 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 35, 72 |
Conread position: | 106-286 |
Cow position: | chr28:29821035-29821216 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 134 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 44, 169 |
Conread position: | 106-601 |
Cow position: | chr28:12151344-12151833 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 196 |
Conread position: | 114-271 |
Cow position: | chr28:29760882-29760723 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 126 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 114-286 |
Cow position: | chr28:5803086-5803260 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 125 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 51, 162 |
Conread position: | 115-271 |
Cow position: | chr28:2988035-2987881 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 123 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 39, 133 |
Conread position: | 115-274 |
Cow position: | chr28:5799346-5799502 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 41, 58 |
Conread position: | 115-274 |
Cow position: | chr28:7027209-7027048 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 119 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 44, 108 |
Conread position: | 115-274 |
Cow position: | chr28:24668660-24668819 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 118 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 34, 24 |
Conread position: | 115-284 |
Cow position: | chr28:10496481-10496311 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 135 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 35, 69 |
Conread position: | 115-285 |
Cow position: | chr28:1954402-1954574 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 125 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 43, 106 |
Conread position: | 115-285 |
Cow position: | chr28:6538216-6538044 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 127 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 44, 108 |
Conread position: | 116-274 |
Cow position: | chr28:22232225-22232069 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 113 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 221-591 |
Cow position: | chr28:21360612-21360990 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 126 |
Conread position: | 222-603 |
Cow position: | chr28:6778819-6778433 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 276 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 9, 14 |
Conread position: | 234-584 |
Cow position: | chr28:14232796-14232434 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 256 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 134, 69 |
Conread position: | 235-591 |
Cow position: | chr28:9179749-9180110 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 263 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 18, 25 |
Conread position: | 235-591 |
Cow position: | chr28:22042151-22041792 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 263 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 18, 25 |
Conread position: | 235-603 |
Cow position: | chr28:7741578-7741940 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 274 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 27, 46 |
Conread position: | 237-498 |
Cow position: | chr28:7788760-7788497 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 184 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 25, 66 |
Conread position: | 237-591 |
Cow position: | chr28:1506005-1506359 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 66 |
Conread position: | 237-597 |
Cow position: | chr28:29821134-29821498 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 66 |
Conread position: | 237-599 |
Cow position: | chr28:1166741-1166388 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 254 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 16, 66 |
Conread position: | 237-599 |
Cow position: | chr28:7003134-7003499 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 267 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 24, 38 |
Conread position: | 237-600 |
Cow position: | chr28:14704249-14703880 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 66 |
Conread position: | 237-600 |
Cow position: | chr28:17389539-17389904 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 67 |
Conread position: | 237-600 |
Cow position: | chr28:26425111-26424756 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 11 |
Conread position: | 237-601 |
Cow position: | chr28:783795-784165 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 66 |
Conread position: | 237-601 |
Cow position: | chr28:1954492-1954863 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 268 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 16, 23 |
Conread position: | 237-601 |
Cow position: | chr28:2085597-2085968 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 268 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 16, 44 |
Conread position: | 237-601 |
Cow position: | chr28:3191117-3190749 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 66 |
Conread position: | 237-601 |
Cow position: | chr28:5750569-5750200 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 66 |
Conread position: | 237-601 |
Cow position: | chr28:8380202-8380540 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 257 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 16, 66 |
Conread position: | 237-601 |
Cow position: | chr28:12409096-12408722 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 271 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 16, 54 |
Conread position: | 237-601 |
Cow position: | chr28:13461119-13461474 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 32 |
Conread position: | 237-601 |
Cow position: | chr28:17666168-17665804 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 66 |
Conread position: | 237-602 |
Cow position: | chr28:22260013-22259646 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 66 |
Conread position: | 242-591 |
Cow position: | chr28:7827131-7827483 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 257 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 25, 17 |
Conread position: | 263-591 |
Cow position: | chr28:5765893-5766224 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 7 |
Conread position: | 268-602 |
Cow position: | chr28:29498816-29498494 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 224 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 37, 72 |
Conread position: | 279-591 |
Cow position: | chr28:5803220-5803515 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 218 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 100, 65 |
Conread position: | 280-592 |
Cow position: | chr28:5799472-5799785 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 66 |
Conread position: | 280-594 |
Cow position: | chr28:10460432-10460111 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 231 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 20, 68 |
Conread position: | 281-601 |
Cow position: | chr28:15034940-15034608 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 244 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 99, 21 |
Conread position: | 281-603 |
Cow position: | chr28:33253489-33253814 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 21 |
Conread position: | 286-600 |
Cow position: | chr28:32791195-32790889 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 242 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 18, 59 |
Conread position: | 286-601 |
Cow position: | chr28:5938670-5938991 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 59 |
Conread position: | 286-601 |
Cow position: | chr28:18519265-18518944 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 59 |
Conread position: | 286-602 |
Cow position: | chr28:5567323-5567632 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 237 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 18, 59 |
Conread position: | 297-484 |
Cow position: | chr28:11490058-11489875 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 136 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 107, 51 |
Conread position: | 297-590 |
Cow position: | chr28:4575267-4574977 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 202 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 82, 36 |
Conread position: | 297-592 |
Cow position: | chr28:21566658-21566952 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 47 |
Conread position: | 297-596 |
Cow position: | chr28:12648486-12648176 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 60 |
Conread position: | 297-602 |
Cow position: | chr28:25039810-25039522 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 211 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 115, 47 |
Conread position: | 298-588 |
Cow position: | chr28:1386199-1385915 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 228 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 6, 40 |
Conread position: | 298-601 |
Cow position: | chr28:18146538-18146238 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 234 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 81, 31 |
Conread position: | 302-594 |
Cow position: | chr28:1216633-1216335 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 213 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 86, 42 |
Conread position: | 307-601 |
Cow position: | chr28:5112935-5112621 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 234 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 73, 38 |
Conread position: | 354-601 |
Cow position: | chr28:10580629-10580371 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 194 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 26, 155 |
Conread position: | 358-587 |
Cow position: | chr28:13604013-13604251 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 166 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 20, 155 |
Conread position: | 382-583 |
Cow position: | chr28:6786548-6786743 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 153 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 181, 31 |
Conread position: | 382-601 |
Cow position: | chr28:1459377-1459598 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 170 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 47, 31 |
Conread position: | 389-601 |
Cow position: | chr28:34595522-34595735 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 165 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 26, 117 |
Conread position: | 397-601 |
Cow position: | chr28:14752083-14752288 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 153 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 16, 100 |
Conread position: | 407-602 |
Cow position: | chr28:10470976-10471169 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 153 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 52, 33 |
Conread position: | 408-601 |
Cow position: | chr28:24884225-24884412 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 151 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 21, 5 |
Conread position: | 415-603 |
Cow position: | chr28:25501161-25500977 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 137 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 148, 20 |
Conread position: | 424-575 |
Cow position: | chr28:11510954-11510796 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 122 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 432-603 |
Cow position: | chr28:33637876-33638047 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 27, 75 |
Conread position: | 449-589 |
Cow position: | chr28:24558960-24559096 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 108 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 116, 16 |
Show alignments to all cow chromosomes.