Cow genome map
| Conread name: | mE7-MI-P-E7-aia-b-08-1-UM.s1 |
| Conread position: | 94-274 |
| Cow position: | chr3:19800271-19800087 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 10, 131 |
| Conread position: | 106-270 |
| Cow position: | chr3:3840890-3840719 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 108 |
| Conread position: | 106-270 |
| Cow position: | chr3:63002623-63002458 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 50, 117 |
| Conread position: | 106-271 |
| Cow position: | chr3:15181282-15181440 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 106-271 |
| Cow position: | chr3:64356875-64356716 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 106-274 |
| Cow position: | chr3:2709949-2709782 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 106-274 |
| Cow position: | chr3:6686726-6686896 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 35, 116 |
| Conread position: | 106-274 |
| Cow position: | chr3:18812420-18812586 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 33 |
| Conread position: | 106-274 |
| Cow position: | chr3:40824308-40824478 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 106-274 |
| Cow position: | chr3:49544291-49544120 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 35 |
| Conread position: | 106-283 |
| Cow position: | chr3:21181781-21181598 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 106-322 |
| Cow position: | chr3:48229562-48229343 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 34, 118 |
| Conread position: | 106-483 |
| Cow position: | chr3:67164204-67164584 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 111-274 |
| Cow position: | chr3:40343045-40343211 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 111-298 |
| Cow position: | chr3:50916258-50916449 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 169 |
| Conread position: | 111-601 |
| Cow position: | chr3:66621107-66621579 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 330 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 114-269 |
| Cow position: | chr3:63200535-63200691 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 103 |
| Conread position: | 114-271 |
| Cow position: | chr3:37625924-37626081 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 114-285 |
| Cow position: | chr3:12678912-12678742 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 115-271 |
| Cow position: | chr3:27919351-27919509 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 106 |
| Conread position: | 115-274 |
| Cow position: | chr3:2906843-2906686 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 115-274 |
| Cow position: | chr3:55892340-55892502 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 115-274 |
| Cow position: | chr3:56146242-56146401 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 115-275 |
| Cow position: | chr3:18860341-18860502 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 106 |
| Conread position: | 115-275 |
| Cow position: | chr3:63915187-63915025 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 108 |
| Conread position: | 115-285 |
| Cow position: | chr3:2918391-2918563 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 106 |
| Conread position: | 115-285 |
| Cow position: | chr3:4287013-4287185 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 106 |
| Conread position: | 115-285 |
| Cow position: | chr3:7157796-7157624 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 108 |
| Conread position: | 115-285 |
| Cow position: | chr3:7170128-7170299 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 99 |
| Conread position: | 115-285 |
| Cow position: | chr3:34506419-34506247 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 108 |
| Conread position: | 115-285 |
| Cow position: | chr3:64651561-64651733 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 115-303 |
| Cow position: | chr3:49271185-49270990 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 116-274 |
| Cow position: | chr3:15054743-15054587 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 68 |
| Conread position: | 116-274 |
| Cow position: | chr3:46016975-46017131 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 117-600 |
| Cow position: | chr3:19720750-19720276 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 9 |
| Conread position: | 118-306 |
| Cow position: | chr3:29579560-29579746 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 121-283 |
| Cow position: | chr3:6783298-6783464 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 17, 101 |
| Conread position: | 121-285 |
| Cow position: | chr3:48843185-48843350 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 100 |
| Conread position: | 126-286 |
| Cow position: | chr3:24346904-24347058 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 129-286 |
| Cow position: | chr3:24644174-24644330 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 132-288 |
| Cow position: | chr3:50126665-50126509 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 87, 137 |
| Conread position: | 159-274 |
| Cow position: | chr3:65208169-65208284 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 197-591 |
| Cow position: | chr3:7157746-7157347 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 280 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 56, 63 |
| Conread position: | 215-601 |
| Cow position: | chr3:10240654-10241036 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 219-603 |
| Cow position: | chr3:24458178-24457799 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 222-591 |
| Cow position: | chr3:6783368-6783740 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 222-601 |
| Cow position: | chr3:30617921-30617537 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 14 |
| Conread position: | 225-600 |
| Cow position: | chr3:46860284-46859908 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 12 |
| Conread position: | 229-601 |
| Cow position: | chr3:46503566-46503933 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 151, 18 |
| Conread position: | 230-601 |
| Cow position: | chr3:66889959-66889584 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 232-588 |
| Cow position: | chr3:50916349-50916714 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 267 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 232-599 |
| Cow position: | chr3:64016361-64015984 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 235-591 |
| Cow position: | chr3:2368325-2367964 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 235-591 |
| Cow position: | chr3:29330277-29329917 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 235-591 |
| Cow position: | chr3:45033755-45034112 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 32, 68 |
| Conread position: | 235-591 |
| Cow position: | chr3:64027123-64026762 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 257 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 32, 68 |
| Conread position: | 235-596 |
| Cow position: | chr3:19879658-19880022 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 235-601 |
| Cow position: | chr3:30331109-30330737 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 236-601 |
| Cow position: | chr3:21181677-21181310 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 17 |
| Conread position: | 236-602 |
| Cow position: | chr3:39879998-39879631 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 21, 70 |
| Conread position: | 237-588 |
| Cow position: | chr3:63002524-63002189 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 237-590 |
| Cow position: | chr3:19800158-19799800 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 262 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 237-591 |
| Cow position: | chr3:18860431-18860790 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 237-591 |
| Cow position: | chr3:27919441-27919800 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 237-591 |
| Cow position: | chr3:34506329-34505971 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 237-591 |
| Cow position: | chr3:37970060-37970419 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 237-591 |
| Cow position: | chr3:40339131-40338775 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 237-591 |
| Cow position: | chr3:47080396-47080037 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 237-591 |
| Cow position: | chr3:56146330-56146676 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 253 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 237-592 |
| Cow position: | chr3:19939907-19940268 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 237-595 |
| Cow position: | chr3:49544191-49543827 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 237-598 |
| Cow position: | chr3:36877642-36877272 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 237-600 |
| Cow position: | chr3:20382043-20382409 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 22 |
| Conread position: | 237-600 |
| Cow position: | chr3:42448125-42448498 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 267 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 237-600 |
| Cow position: | chr3:53516622-53516982 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 23 |
| Conread position: | 237-601 |
| Cow position: | chr3:2709853-2709484 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 237-601 |
| Cow position: | chr3:4287103-4287472 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 237-601 |
| Cow position: | chr3:30315575-30315931 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 237-601 |
| Cow position: | chr3:34029910-34029538 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 237-601 |
| Cow position: | chr3:40824407-40824775 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 237-601 |
| Cow position: | chr3:48843269-48843639 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 65 |
| Conread position: | 237-601 |
| Cow position: | chr3:59862395-59862755 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 237-601 |
| Cow position: | chr3:64651651-64652020 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 237-602 |
| Cow position: | chr3:24445059-24444689 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 237-603 |
| Cow position: | chr3:57483713-57483338 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 249-591 |
| Cow position: | chr3:68698947-68698600 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 128, 99 |
| Conread position: | 262-567 |
| Cow position: | chr3:24346997-24347297 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 81 |
| Conread position: | 263-551 |
| Cow position: | chr3:56398223-56398518 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 263-588 |
| Cow position: | chr3:2906736-2906397 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 24, 86 |
| Conread position: | 264-593 |
| Cow position: | chr3:13476436-13476752 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 108, 31 |
| Conread position: | 276-601 |
| Cow position: | chr3:2869841-2870171 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 105, 26 |
| Conread position: | 280-555 |
| Cow position: | chr3:48229414-48229139 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 15 |
| Conread position: | 280-591 |
| Cow position: | chr3:70888199-70888507 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 96, 15 |
| Conread position: | 280-598 |
| Cow position: | chr3:48058305-48057981 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 280-603 |
| Cow position: | chr3:31319221-31319546 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 281-592 |
| Cow position: | chr3:7247603-7247907 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 96, 21 |
| Conread position: | 281-595 |
| Cow position: | chr3:5884594-5884908 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 281-599 |
| Cow position: | chr3:78026350-78026032 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 281-601 |
| Cow position: | chr3:49136510-49136182 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 283-599 |
| Cow position: | chr3:45975558-45975892 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 283-602 |
| Cow position: | chr3:72631124-72631450 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 62 |
| Conread position: | 284-591 |
| Cow position: | chr3:47087362-47087669 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 284-596 |
| Cow position: | chr3:38494301-38494619 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 284-596 |
| Cow position: | chr3:67164349-67164658 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 284-601 |
| Cow position: | chr3:7478860-7478532 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 286-566 |
| Cow position: | chr3:56339353-56339075 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 90, 58 |
| Conread position: | 286-591 |
| Cow position: | chr3:18812563-18812871 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 286-594 |
| Cow position: | chr3:5953132-5952807 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 286-600 |
| Cow position: | chr3:595199-595518 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 287-601 |
| Cow position: | chr3:23289267-23288951 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 53 |
| Conread position: | 294-497 |
| Cow position: | chr3:77444523-77444721 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 159, 50 |
| Conread position: | 296-599 |
| Cow position: | chr3:68358251-68357955 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 83, 48 |
| Conread position: | 297-589 |
| Cow position: | chr3:24644308-24644595 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 297-590 |
| Cow position: | chr3:29579702-29580001 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 82, 47 |
| Conread position: | 297-592 |
| Cow position: | chr3:6686885-6687164 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 122, 47 |
| Conread position: | 297-596 |
| Cow position: | chr3:33634178-33634486 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 47 |
| Conread position: | 297-600 |
| Cow position: | chr3:5994011-5993698 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 83, 47 |
| Conread position: | 297-601 |
| Cow position: | chr3:38867392-38867700 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 47 |
| Conread position: | 298-591 |
| Cow position: | chr3:3057880-3058188 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 81, 51 |
| Conread position: | 298-591 |
| Cow position: | chr3:77424700-77424975 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 81, 31 |
| Conread position: | 298-602 |
| Cow position: | chr3:74226338-74226036 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 89, 51 |
| Conread position: | 299-591 |
| Cow position: | chr3:3840433-3840144 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 77, 45 |
| Conread position: | 299-594 |
| Cow position: | chr3:64823178-64823483 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 9, 47 |
| Conread position: | 299-603 |
| Cow position: | chr3:56100605-56100297 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 10 |
| Conread position: | 306-500 |
| Cow position: | chr3:42720609-42720410 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 306-595 |
| Cow position: | chr3:53412213-53412506 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 73, 38 |
| Conread position: | 307-589 |
| Cow position: | chr3:6495571-6495860 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 22 |
| Conread position: | 309-591 |
| Cow position: | chr3:31416106-31416389 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 314-560 |
| Cow position: | chr3:72671434-72671187 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 59, 30 |
| Conread position: | 321-591 |
| Cow position: | chr3:68872657-68872382 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 349-588 |
| Cow position: | chr3:58948663-58948907 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 195 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 31, 150 |
| Conread position: | 354-591 |
| Cow position: | chr3:15054552-15054328 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 354-592 |
| Cow position: | chr3:24588329-24588091 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 355-591 |
| Cow position: | chr3:44925190-44925435 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 22, 64 |
| Conread position: | 359-594 |
| Cow position: | chr3:34198024-34198246 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 367-595 |
| Cow position: | chr3:55486143-55486371 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 368-591 |
| Cow position: | chr3:2854299-2854073 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 11, 127 |
| Conread position: | 383-591 |
| Cow position: | chr3:29575961-29575751 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 49, 30 |
| Conread position: | 383-592 |
| Cow position: | chr3:60263856-60263645 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 70 |
| Conread position: | 383-596 |
| Cow position: | chr3:15720883-15721083 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 186, 28 |
| Conread position: | 383-603 |
| Cow position: | chr3:35357600-35357812 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 186, 40 |
| Conread position: | 389-591 |
| Cow position: | chr3:63241068-63240872 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 393-593 |
| Cow position: | chr3:2509867-2509667 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 405-590 |
| Cow position: | chr3:18462647-18462461 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 8, 94 |
| Conread position: | 415-595 |
| Cow position: | chr3:65208023-65207844 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 76 |
| Conread position: | 421-598 |
| Cow position: | chr3:40616641-40616466 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 47 |
Show alignments to all cow chromosomes.