Cow genome map

Conread name: mE7-MI-P-E7-aia-b-08-1-UM.s1

Conread position: 105-286
Cow position: chr4:60263441-60263255 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 174

Conread position: 106-266
Cow position: chr4:34178513-34178350 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 106-270
Cow position: chr4:51042564-51042404 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 52, 108

Conread position: 106-271
Cow position: chr4:16360641-16360806 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 106-273
Cow position: chr4:6489637-6489471 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 106-284
Cow position: chr4:67681918-67682099 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 34

Conread position: 109-274
Cow position: chr4:5444107-5443938 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 114

Conread position: 114-271
Cow position: chr4:14776186-14776342 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 37

Conread position: 114-271
Cow position: chr4:54239704-54239863 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 45, 100

Conread position: 114-274
Cow position: chr4:25598765-25598603 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 115-274
Cow position: chr4:1929908-1929747 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 108

Conread position: 115-274
Cow position: chr4:16057412-16057574 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 115-275
Cow position: chr4:17093131-17092970 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 115-285
Cow position: chr4:5880888-5881061 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 107

Conread position: 115-285
Cow position: chr4:45106193-45106365 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 99

Conread position: 117-274
Cow position: chr4:99482-99322 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 107

Conread position: 125-284
Cow position: chr4:54969475-54969637 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 105, 48

Conread position: 129-274
Cow position: chr4:57984735-57984881 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 129-283
Cow position: chr4:13494077-13494235 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 137-271
Cow position: chr4:46665280-46665417 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 80

Conread position: 143-274
Cow position: chr4:4416821-4416953 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 77

Conread position: 145-268
Cow position: chr4:14820092-14819973 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 154-284
Cow position: chr4:68110259-68110125 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 198-595
Cow position: chr4:38930180-38930570 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 265
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 155

Conread position: 201-591
Cow position: chr4:41959675-41960076 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 59

Conread position: 205-601
Cow position: chr4:44726379-44726764 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 57

Conread position: 221-560
Cow position: chr4:44924725-44924388 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 76

Conread position: 222-591
Cow position: chr4:6567194-6567555 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 9, 16

Conread position: 229-591
Cow position: chr4:34178420-34178065 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 33, 11

Conread position: 234-600
Cow position: chr4:10882369-10882739 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 41

Conread position: 237-590
Cow position: chr4:530227-530580 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 28, 37

Conread position: 237-591
Cow position: chr4:5444009-5443649 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 23

Conread position: 237-592
Cow position: chr4:3126627-3126987 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 16, 23

Conread position: 237-592
Cow position: chr4:19005489-19005136 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 26

Conread position: 237-592
Cow position: chr4:44780402-44780044 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 16, 23

Conread position: 237-598
Cow position: chr4:36897199-36897559 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 66

Conread position: 237-599
Cow position: chr4:159985-160343 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 137, 107

Conread position: 237-599
Cow position: chr4:26876957-26876597 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 66

Conread position: 237-601
Cow position: chr4:6489540-6489166 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 16, 36

Conread position: 237-601
Cow position: chr4:16639436-16639796 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 36

Conread position: 237-601
Cow position: chr4:25598674-25598299 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 255
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 66

Conread position: 237-601
Cow position: chr4:31564481-31564097 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 275
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 16, 67

Conread position: 237-601
Cow position: chr4:43318817-43318449 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 66

Conread position: 237-601
Cow position: chr4:57984810-57985178 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 66

Conread position: 237-602
Cow position: chr4:99393-99031 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 23

Conread position: 237-602
Cow position: chr4:1049434-1049072 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 21

Conread position: 237-602
Cow position: chr4:1929818-1929448 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 23

Conread position: 237-602
Cow position: chr4:12588154-12588519 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 66

Conread position: 237-602
Cow position: chr4:13494153-13494517 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 37

Conread position: 237-603
Cow position: chr4:16360738-16361097 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 16, 66

Conread position: 266-574
Cow position: chr4:2089242-2089556 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 20, 58

Conread position: 276-597
Cow position: chr4:47462674-47463004 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 75

Conread position: 277-574
Cow position: chr4:46665389-46665693 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 105, 67

Conread position: 280-551
Cow position: chr4:61712744-61712480 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 66

Conread position: 280-589
Cow position: chr4:13870870-13871157 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 47

Conread position: 280-589
Cow position: chr4:50975495-50975803 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 67

Conread position: 280-590
Cow position: chr4:6615255-6614946 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 99, 22

Conread position: 280-591
Cow position: chr4:9847347-9847031 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 22

Conread position: 280-598
Cow position: chr4:50981347-50981670 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 99, 23

Conread position: 281-590
Cow position: chr4:17092997-17092687 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 93, 21

Conread position: 281-591
Cow position: chr4:42405476-42405788 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 96, 21

Conread position: 281-601
Cow position: chr4:67682061-67682383 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 36, 21

Conread position: 282-528
Cow position: chr4:47253468-47253220 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 94, 21

Conread position: 282-581
Cow position: chr4:11110412-11110115 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 26

Conread position: 282-588
Cow position: chr4:60263292-60262984 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 97, 62

Conread position: 282-602
Cow position: chr4:43881971-43882296 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 63

Conread position: 283-459
Cow position: chr4:27294437-27294256 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 61

Conread position: 284-591
Cow position: chr4:18337722-18338030 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 10, 22

Conread position: 284-591
Cow position: chr4:41955629-41955939 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 10, 61

Conread position: 284-602
Cow position: chr4:12240349-12240033 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 61

Conread position: 286-601
Cow position: chr4:17925095-17924775 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 59

Conread position: 286-601
Cow position: chr4:33071950-33071648 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 59

Conread position: 292-500
Cow position: chr4:34183748-34183545 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 154, 52

Conread position: 294-541
Cow position: chr4:967197-966944 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 82, 50

Conread position: 297-545
Cow position: chr4:28832445-28832676 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 157, 36

Conread position: 297-591
Cow position: chr4:68110148-68109851 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 81, 47

Conread position: 297-599
Cow position: chr4:45407856-45408153 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 114, 23

Conread position: 298-588
Cow position: chr4:41428193-41428486 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 33

Conread position: 299-603
Cow position: chr4:28149304-28149601 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 56, 45

Conread position: 313-600
Cow position: chr4:22474248-22474536 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 63, 20

Conread position: 315-591
Cow position: chr4:61693621-61693346 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 30

Conread position: 319-588
Cow position: chr4:39268245-39267981 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 18

Conread position: 348-569
Cow position: chr4:13958107-13958331 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 31, 91

Conread position: 359-598
Cow position: chr4:9355319-9355565 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 59

Conread position: 362-591
Cow position: chr4:20067775-20067547 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 114

Conread position: 387-590
Cow position: chr4:182821-183026 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 105

Conread position: 389-595
Cow position: chr4:31638944-31638744 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 93

Conread position: 389-601
Cow position: chr4:33494523-33494741 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 25, 122

Conread position: 396-601
Cow position: chr4:65665415-65665208 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 33, 17

Conread position: 405-601
Cow position: chr4:6865518-6865321 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 96

Conread position: 417-592
Cow position: chr4:21359232-21359409 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 88

Conread position: 419-601
Cow position: chr4:1952565-1952381 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 80

Show alignments to all cow chromosomes.