Cow genome map

Conread name: mH0-MI-P-HO-afz-d-08-1-UM.s1

Conread position: 1-127
Cow position: chr16:56149597-56149472 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 1-194
Cow position: chr16:44972930-44973122 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 159
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 40, 140

Conread position: 1-202
Cow position: chr16:37670691-37670890 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 142

Conread position: 1-204
Cow position: chr16:14570401-14570207 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 162, 31

Conread position: 1-204
Cow position: chr16:48955911-48955708 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 32

Conread position: 1-207
Cow position: chr16:42254500-42254701 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 30, 135

Conread position: 1-210
Cow position: chr16:39416194-39416409 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 1-213
Cow position: chr16:42079542-42079744 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 1-214
Cow position: chr16:54228469-54228683 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 146

Conread position: 1-215
Cow position: chr16:36231441-36231655 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 103

Conread position: 1-222
Cow position: chr16:48495101-48495321 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 101

Conread position: 1-230
Cow position: chr16:15805121-15804894 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 153, 33

Conread position: 1-232
Cow position: chr16:2963039-2963270 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 149

Conread position: 1-245
Cow position: chr16:23059270-23059511 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 142

Conread position: 1-291
Cow position: chr16:15369809-15369525 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 143

Conread position: 1-291
Cow position: chr16:41834683-41834399 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 14

Conread position: 1-297
Cow position: chr16:8871623-8871917 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 145

Conread position: 1-298
Cow position: chr16:47367802-47367507 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 142

Conread position: 1-300
Cow position: chr16:1957908-1958208 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 147

Conread position: 1-300
Cow position: chr16:22320471-22320752 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 143

Conread position: 1-300
Cow position: chr16:29512589-29512296 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 207
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 74

Conread position: 1-305
Cow position: chr16:5416457-5416762 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 1-305
Cow position: chr16:24147468-24147171 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 37, 139

Conread position: 1-305
Cow position: chr16:25157589-25157880 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 27, 134

Conread position: 1-310
Cow position: chr16:55151148-55150839 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 143

Conread position: 1-315
Cow position: chr16:9786130-9785812 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 142

Conread position: 1-315
Cow position: chr16:31425876-31425554 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 28, 143

Conread position: 1-316
Cow position: chr16:16096013-16095702 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 82

Conread position: 1-316
Cow position: chr16:44049106-44049420 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 143

Conread position: 1-316
Cow position: chr16:53612619-53612306 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 146

Conread position: 1-317
Cow position: chr16:237295-236984 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 28, 143

Conread position: 1-320
Cow position: chr16:13043057-13042741 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 209
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 15

Conread position: 1-321
Cow position: chr16:16032700-16032384 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 15, 128

Conread position: 1-323
Cow position: chr16:2232908-2233229 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 148

Conread position: 1-323
Cow position: chr16:25893323-25893005 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 162, 142

Conread position: 1-323
Cow position: chr16:26654474-26654160 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 99

Conread position: 1-324
Cow position: chr16:193121-193439 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 14

Conread position: 1-324
Cow position: chr16:600238-599921 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 110

Conread position: 1-324
Cow position: chr16:2305179-2304856 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 146

Conread position: 1-324
Cow position: chr16:4399058-4398753 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 19

Conread position: 1-324
Cow position: chr16:4972709-4973029 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 128

Conread position: 1-324
Cow position: chr16:13422105-13422426 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 144

Conread position: 1-324
Cow position: chr16:15495270-15494954 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 5

Conread position: 1-324
Cow position: chr16:18694148-18694476 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 91

Conread position: 1-324
Cow position: chr16:23810334-23810017 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 124

Conread position: 1-324
Cow position: chr16:25174052-25173742 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 36

Conread position: 1-324
Cow position: chr16:25444694-25444373 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 149

Conread position: 1-324
Cow position: chr16:25964717-25964407 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 33

Conread position: 1-324
Cow position: chr16:28267899-28268219 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 48

Conread position: 1-324
Cow position: chr16:41804632-41804950 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 150

Conread position: 1-324
Cow position: chr16:49126894-49127194 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 44

Conread position: 1-324
Cow position: chr16:49253444-49253747 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 59

Conread position: 1-324
Cow position: chr16:53509713-53510028 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 101

Conread position: 1-326
Cow position: chr16:702073-701755 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 34

Conread position: 1-326
Cow position: chr16:29036675-29036371 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 58

Conread position: 1-326
Cow position: chr16:41034118-41033793 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 149

Conread position: 1-327
Cow position: chr16:25169044-25168729 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 221
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 28, 50

Conread position: 1-345
Cow position: chr16:20378263-20377929 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 143

Conread position: 1-346
Cow position: chr16:7541299-7540958 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 142

Conread position: 2-281
Cow position: chr16:48341390-48341669 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 19, 149

Conread position: 3-187
Cow position: chr16:825288-825105 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 138

Conread position: 3-189
Cow position: chr16:3027245-3027062 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 160, 138

Conread position: 3-189
Cow position: chr16:3030459-3030642 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 160, 138

Conread position: 3-222
Cow position: chr16:7566882-7566664 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 142

Conread position: 3-246
Cow position: chr16:48010592-48010819 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 160, 12

Conread position: 3-266
Cow position: chr16:19062651-19062389 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 94

Conread position: 3-273
Cow position: chr16:42745668-42745926 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 141

Conread position: 3-295
Cow position: chr16:44676170-44675877 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 146

Conread position: 3-299
Cow position: chr16:49577790-49577511 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 124

Conread position: 3-305
Cow position: chr16:29538998-29539293 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 138

Conread position: 3-305
Cow position: chr16:45754819-45755105 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 160, 40

Conread position: 3-322
Cow position: chr16:49742713-49743027 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 88

Conread position: 3-324
Cow position: chr16:2724408-2724728 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 139

Conread position: 3-324
Cow position: chr16:27013213-27012898 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 141

Conread position: 3-324
Cow position: chr16:43770339-43770655 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 73

Conread position: 3-326
Cow position: chr16:7155415-7155098 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 12

Conread position: 5-347
Cow position: chr16:50190307-50190640 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 134

Conread position: 6-131
Cow position: chr16:45683500-45683372 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 6-133
Cow position: chr16:23877287-23877157 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 18, 0

Conread position: 6-133
Cow position: chr16:39788191-39788321 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 6-204
Cow position: chr16:3011927-3011733 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 73

Conread position: 6-214
Cow position: chr16:7043119-7043327 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 136

Conread position: 6-214
Cow position: chr16:52952427-52952635 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 18, 136

Conread position: 6-218
Cow position: chr16:19778124-19778337 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 145

Conread position: 6-219
Cow position: chr16:8883746-8883533 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 18, 136

Conread position: 6-232
Cow position: chr16:35342688-35342914 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 136

Conread position: 6-232
Cow position: chr16:44450756-44450529 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 35, 136

Conread position: 6-235
Cow position: chr16:49096777-49096548 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 140

Conread position: 6-240
Cow position: chr16:47247885-47247651 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 140

Conread position: 6-245
Cow position: chr16:16942529-16942290 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 18, 136

Conread position: 6-249
Cow position: chr16:20502848-20502605 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 23, 144

Conread position: 6-251
Cow position: chr16:49094285-49094529 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 18, 66

Conread position: 6-262
Cow position: chr16:26658778-26658522 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 18, 136

Conread position: 6-267
Cow position: chr16:32118392-32118131 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-276
Cow position: chr16:51641060-51640792 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 136

Conread position: 6-277
Cow position: chr16:23772862-23773133 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-280
Cow position: chr16:39033532-39033806 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 144

Conread position: 6-296
Cow position: chr16:5350695-5350985 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 6-304
Cow position: chr16:23563259-23562969 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 123

Conread position: 6-305
Cow position: chr16:47773076-47772778 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 32

Conread position: 6-310
Cow position: chr16:37387989-37388292 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 71

Conread position: 6-316
Cow position: chr16:15570578-15570272 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 30

Conread position: 6-316
Cow position: chr16:24445265-24444944 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 147

Conread position: 6-316
Cow position: chr16:24987691-24988001 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-316
Cow position: chr16:25344792-25344481 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 144

Conread position: 6-316
Cow position: chr16:25454648-25454957 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 144

Conread position: 6-316
Cow position: chr16:37478048-37478358 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 136

Conread position: 6-316
Cow position: chr16:51087595-51087287 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 140

Conread position: 6-321
Cow position: chr16:23533187-23533501 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 6-322
Cow position: chr16:417708-417393 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 6-323
Cow position: chr16:2408080-2408397 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 75

Conread position: 6-323
Cow position: chr16:2480342-2480652 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 144

Conread position: 6-324
Cow position: chr16:840083-839777 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 67

Conread position: 6-324
Cow position: chr16:1563575-1563892 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 144

Conread position: 6-324
Cow position: chr16:1734552-1734234 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 136

Conread position: 6-324
Cow position: chr16:3148226-3148540 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 142

Conread position: 6-324
Cow position: chr16:3769195-3769515 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 120

Conread position: 6-324
Cow position: chr16:4426903-4426587 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 144

Conread position: 6-324
Cow position: chr16:5435638-5435321 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 136

Conread position: 6-324
Cow position: chr16:5488684-5488367 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 61

Conread position: 6-324
Cow position: chr16:5756748-5756428 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 28

Conread position: 6-324
Cow position: chr16:7467421-7467108 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 138

Conread position: 6-324
Cow position: chr16:8813292-8813607 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 136

Conread position: 6-324
Cow position: chr16:10441051-10440735 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 38

Conread position: 6-324
Cow position: chr16:12160471-12160784 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 135

Conread position: 6-324
Cow position: chr16:14351871-14352186 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 144

Conread position: 6-324
Cow position: chr16:15187873-15187564 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 30

Conread position: 6-324
Cow position: chr16:15979565-15979882 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 144

Conread position: 6-324
Cow position: chr16:21018372-21018055 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 144

Conread position: 6-324
Cow position: chr16:23249142-23249459 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 136

Conread position: 6-324
Cow position: chr16:23986126-23985809 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 136

Conread position: 6-324
Cow position: chr16:24209585-24209902 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 159

Conread position: 6-324
Cow position: chr16:24240587-24240904 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 144

Conread position: 6-324
Cow position: chr16:26990127-26990444 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-324
Cow position: chr16:27730568-27730885 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 6-324
Cow position: chr16:29050458-29050140 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 136

Conread position: 6-324
Cow position: chr16:32326676-32326360 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 79

Conread position: 6-324
Cow position: chr16:37445891-37446202 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 138

Conread position: 6-324
Cow position: chr16:40293357-40293674 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 136

Conread position: 6-324
Cow position: chr16:41163962-41164275 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 55

Conread position: 6-324
Cow position: chr16:43562583-43562899 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 144

Conread position: 6-324
Cow position: chr16:43894448-43894766 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 143

Conread position: 6-324
Cow position: chr16:48411448-48411131 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 144

Conread position: 6-324
Cow position: chr16:52527044-52526729 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 144

Conread position: 6-324
Cow position: chr16:54231539-54231846 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 28

Conread position: 6-326
Cow position: chr16:41347-41028 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 140

Conread position: 6-326
Cow position: chr16:2960492-2960173 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-326
Cow position: chr16:4722292-4721978 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 136

Conread position: 6-326
Cow position: chr16:5525286-5525610 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 144

Conread position: 6-326
Cow position: chr16:6677534-6677215 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 139

Conread position: 6-326
Cow position: chr16:7385578-7385259 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-326
Cow position: chr16:12485487-12485806 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-326
Cow position: chr16:12651733-12651422 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 87

Conread position: 6-326
Cow position: chr16:14040238-14039919 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 156

Conread position: 6-326
Cow position: chr16:14100661-14100346 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 74

Conread position: 6-326
Cow position: chr16:15312094-15311777 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 136

Conread position: 6-326
Cow position: chr16:15812895-15812562 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 95

Conread position: 6-326
Cow position: chr16:15904408-15904710 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 142

Conread position: 6-326
Cow position: chr16:16149935-16150254 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 138

Conread position: 6-326
Cow position: chr16:18212382-18212701 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-326
Cow position: chr16:18650771-18651088 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-326
Cow position: chr16:18975681-18975362 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-326
Cow position: chr16:19081859-19081546 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 115

Conread position: 6-326
Cow position: chr16:20278653-20278334 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-326
Cow position: chr16:22798891-22799210 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 6-326
Cow position: chr16:24407725-24407404 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 161

Conread position: 6-326
Cow position: chr16:24615262-24615571 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 136

Conread position: 6-326
Cow position: chr16:24636703-24637020 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 65

Conread position: 6-326
Cow position: chr16:25075406-25075087 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-326
Cow position: chr16:25880129-25879810 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-326
Cow position: chr16:26627565-26627246 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-326
Cow position: chr16:27593011-27593328 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 77

Conread position: 6-326
Cow position: chr16:28193488-28193806 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-326
Cow position: chr16:40879405-40879086 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-326
Cow position: chr16:42211309-42210990 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-326
Cow position: chr16:46555235-46554916 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 144

Conread position: 6-326
Cow position: chr16:49780137-49780456 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 144

Conread position: 6-343
Cow position: chr16:28206298-28206633 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 144

Conread position: 6-345
Cow position: chr16:11633031-11633368 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 144

Conread position: 7-283
Cow position: chr16:46385735-46386003 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 18, 136

Conread position: 7-305
Cow position: chr16:4691218-4690929 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 156, 30

Conread position: 7-305
Cow position: chr16:38177576-38177281 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 199
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 135

Conread position: 7-317
Cow position: chr16:42733479-42733783 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 156, 30

Conread position: 7-318
Cow position: chr16:4079150-4079456 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 78

Conread position: 7-323
Cow position: chr16:49515969-49516287 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 138

Conread position: 7-326
Cow position: chr16:23065814-23065497 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 14, 55

Conread position: 7-326
Cow position: chr16:26500451-26500157 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 7-343
Cow position: chr16:18426204-18425881 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 7, 28

Conread position: 8-233
Cow position: chr16:6389845-6390070 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 136

Conread position: 8-326
Cow position: chr16:10372625-10372940 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 134

Conread position: 8-326
Cow position: chr16:47404191-47403876 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 138

Conread position: 9-133
Cow position: chr16:20968077-20968204 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 16, 0

Conread position: 9-186
Cow position: chr16:18205033-18204861 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 154, 23

Conread position: 9-262
Cow position: chr16:41576049-41575800 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 154, 34

Conread position: 9-316
Cow position: chr16:15485597-15485294 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 83

Conread position: 9-316
Cow position: chr16:45609214-45608918 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 23

Conread position: 9-322
Cow position: chr16:56913428-56913736 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 127

Conread position: 9-323
Cow position: chr16:41515944-41515629 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 138

Conread position: 9-323
Cow position: chr16:50712630-50712942 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 134

Conread position: 9-324
Cow position: chr16:7457182-7457486 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 9-324
Cow position: chr16:8481820-8482124 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 128

Conread position: 9-324
Cow position: chr16:26666514-26666200 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 140

Conread position: 9-324
Cow position: chr16:45534270-45533958 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 136

Conread position: 9-324
Cow position: chr16:54179556-54179868 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 151

Conread position: 9-326
Cow position: chr16:7303566-7303250 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 141

Conread position: 9-326
Cow position: chr16:13721779-13722095 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 141

Conread position: 9-326
Cow position: chr16:45465111-45465423 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 71

Conread position: 9-345
Cow position: chr16:5763668-5763322 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 158

Conread position: 10-122
Cow position: chr16:47242129-47242239 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 28

Conread position: 10-215
Cow position: chr16:21090897-21090696 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 153, 25

Conread position: 10-324
Cow position: chr16:28468314-28468627 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 139

Conread position: 10-324
Cow position: chr16:46101810-46102121 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 132

Conread position: 10-326
Cow position: chr16:45703993-45704300 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 10-343
Cow position: chr16:49219147-49219471 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 119

Conread position: 10-345
Cow position: chr16:25935552-25935222 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 87

Conread position: 11-173
Cow position: chr16:46223706-46223865 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 152, 130

Conread position: 11-202
Cow position: chr16:39645787-39645600 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 151, 26

Conread position: 11-272
Cow position: chr16:23403621-23403361 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 73

Conread position: 11-307
Cow position: chr16:55682303-55682025 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 29

Conread position: 11-308
Cow position: chr16:14029356-14029637 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 130, 0

Conread position: 11-314
Cow position: chr16:3332698-3332412 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 48

Conread position: 11-324
Cow position: chr16:41623889-41624184 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 152, 20

Conread position: 11-326
Cow position: chr16:5665909-5665595 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 139

Conread position: 12-173
Cow position: chr16:24229044-24228887 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 151, 22

Conread position: 13-245
Cow position: chr16:39457184-39456963 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 184
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 38

Conread position: 13-286
Cow position: chr16:45654778-45655048 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 150, 129

Conread position: 13-323
Cow position: chr16:18745237-18745533 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 98

Conread position: 15-273
Cow position: chr16:5844713-5844453 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 63, 19

Conread position: 16-194
Cow position: chr16:7010127-7009952 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 147, 125

Conread position: 16-214
Cow position: chr16:16237182-16237375 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 147, 80

Conread position: 16-324
Cow position: chr16:41036229-41036530 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 18

Conread position: 17-184
Cow position: chr16:14722464-14722626 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 17-219
Cow position: chr16:4712169-4711967 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 113, 15

Conread position: 17-266
Cow position: chr16:2224151-2224396 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 57

Conread position: 17-305
Cow position: chr16:5833597-5833315 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 20, 43

Conread position: 17-316
Cow position: chr16:5632213-5632506 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 125

Conread position: 17-324
Cow position: chr16:4367420-4367121 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 109

Conread position: 17-324
Cow position: chr16:37058216-37058513 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 114

Conread position: 17-324
Cow position: chr16:42074101-42074403 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 20

Conread position: 17-324
Cow position: chr16:55868122-55867824 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 24, 112

Conread position: 17-326
Cow position: chr16:28022277-28022563 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 18-323
Cow position: chr16:12737076-12736777 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 145, 19

Conread position: 19-219
Cow position: chr16:13989080-13988891 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 106

Conread position: 20-323
Cow position: chr16:49142277-49142576 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 211
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 143, 121

Conread position: 20-324
Cow position: chr16:37454691-37454985 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 64

Conread position: 20-324
Cow position: chr16:37925190-37925489 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 16

Conread position: 21-286
Cow position: chr16:45560086-45559826 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 39

Conread position: 22-324
Cow position: chr16:20204791-20204500 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 14

Conread position: 24-324
Cow position: chr16:46571784-46572080 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 82, 11

Conread position: 24-324
Cow position: chr16:51400771-51401051 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 25-326
Cow position: chr16:52856055-52856341 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 55

Conread position: 26-321
Cow position: chr16:30052735-30052447 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 137, 115

Conread position: 27-250
Cow position: chr16:5747314-5747534 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 68

Conread position: 27-264
Cow position: chr16:16267120-16267346 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 143, 78

Conread position: 30-348
Cow position: chr16:55591221-55591508 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 133, 12

Conread position: 34-299
Cow position: chr16:16231618-16231338 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 100, 59

Conread position: 40-316
Cow position: chr16:25743476-25743208 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 183
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 123, 14

Conread position: 40-322
Cow position: chr16:10859556-10859829 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 123, 20

Conread position: 40-323
Cow position: chr16:39615998-39615721 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 116, 101

Conread position: 40-326
Cow position: chr16:23711511-23711793 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 107

Conread position: 40-326
Cow position: chr16:36247245-36246967 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 68

Conread position: 40-326
Cow position: chr16:37053814-37053532 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 107

Conread position: 46-302
Cow position: chr16:54703266-54703014 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 101

Conread position: 46-324
Cow position: chr16:7673693-7673965 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 24

Conread position: 47-307
Cow position: chr16:34482927-34482677 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 87

Conread position: 47-317
Cow position: chr16:11054758-11054493 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 118, 26

Conread position: 47-326
Cow position: chr16:16540175-16539903 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 92

Conread position: 47-326
Cow position: chr16:25263369-25263094 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 182
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 116, 94

Conread position: 48-323
Cow position: chr16:49230512-49230789 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 85, 94

Conread position: 49-326
Cow position: chr16:12244278-12244547 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 92

Conread position: 49-326
Cow position: chr16:16680828-16681101 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 93

Conread position: 52-324
Cow position: chr16:12535190-12535452 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 87

Conread position: 52-326
Cow position: chr16:4343142-4343411 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 88

Conread position: 56-316
Cow position: chr16:3349765-3349513 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 38

Conread position: 58-324
Cow position: chr16:54322665-54322922 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 81

Conread position: 62-224
Cow position: chr16:26868003-26868161 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 101, 7

Conread position: 62-324
Cow position: chr16:3820126-3819860 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 221

Conread position: 62-326
Cow position: chr16:21190011-21189752 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 7

Conread position: 68-299
Cow position: chr16:39475582-39475349 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 152

Conread position: 70-305
Cow position: chr16:48371357-48371589 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 74

Conread position: 70-323
Cow position: chr16:658696-658457 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 93, 69

Conread position: 73-324
Cow position: chr16:31585959-31586204 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 68

Conread position: 74-314
Cow position: chr16:15409343-15409584 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 71

Conread position: 78-323
Cow position: chr16:54287279-54287034 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 63

Conread position: 79-326
Cow position: chr16:15349417-15349653 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 84, 60

Conread position: 94-282
Cow position: chr16:56445770-56445952 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 19

Conread position: 94-299
Cow position: chr16:819687-819490 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 45

Conread position: 94-305
Cow position: chr16:14569477-14569683 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 69, 50

Conread position: 96-326
Cow position: chr16:15255762-15255975 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 69, 48

Conread position: 99-324
Cow position: chr16:20201790-20201567 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 44

Conread position: 103-326
Cow position: chr16:6706002-6706221 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 60, 43

Conread position: 105-326
Cow position: chr16:6264261-6264483 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 135
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 23, 214

Conread position: 106-214
Cow position: chr16:51236095-51236203 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 35

Conread position: 106-323
Cow position: chr16:34533000-34532791 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 57, 38

Conread position: 123-324
Cow position: chr16:37486562-37486761 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 22

Conread position: 131-326
Cow position: chr16:46365113-46365308 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 187

Conread position: 142-326
Cow position: chr16:23875861-23876046 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 21, 177

Conread position: 145-324
Cow position: chr16:20968277-20968451 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 148
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 18, 108

Conread position: 146-323
Cow position: chr16:43834-43659 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 100

Conread position: 146-348
Cow position: chr16:4756697-4756497 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 164
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 17, 92

Conread position: 149-326
Cow position: chr16:26388497-26388671 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 105

Conread position: 154-292
Cow position: chr16:7998410-7998270 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 155-273
Cow position: chr16:29680223-29680337 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 8, 0

Conread position: 155-326
Cow position: chr16:37146638-37146471 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 8, 36

Conread position: 156-323
Cow position: chr16:4461648-4461814 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 139
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 7, 118

Conread position: 164-316
Cow position: chr16:24702435-24702585 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 129
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 111, 0

Conread position: 167-315
Cow position: chr16:49170332-49170480 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 138

Conread position: 172-324
Cow position: chr16:44127209-44127360 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 143, 0

Show alignments to all cow chromosomes.