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Cow genome map

           
Conread name:
           
mH0-MI-P-HO-afz-d-08-1-UM.s1
        

               
Conread position:
               
1-127
               

               
Cow position:
               
chr18:27529594-27529465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
1-130
               

               
Cow position:
               
chr18:51713462-51713594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr18:27800280-27800416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr18:9365144-9364984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
130, 36
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr18:31563875-31564052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr18:48548417-48548212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
162, 30
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr18:7950374-7950173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr18:7953247-7953031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
27, 143
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr18:14047968-14047757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 129
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr18:23473245-23473463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr18:41208534-41208305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 40
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:7359018-7358768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr18:29059216-29059475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
24, 149
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr18:32122082-32122336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 143
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr18:36224035-36223780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
26, 143
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr18:27194104-27193843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
24, 143
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr18:35013048-35013319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr18:2439457-2439727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
162, 33
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr18:28929844-28930105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
162, 34
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr18:51272536-51272805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr18:55699915-55700194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 149
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:16025054-16025356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr18:2853187-2853498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 146
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr18:30876673-30876970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr18:45978977-45978674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 148
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr18:45981096-45980794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 142
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:17670370-17670680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
28, 143
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr18:5570124-5569821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr18:6103814-6104123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
162, 34
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:1144949-1145265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 149
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:23659290-23659615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 147
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:43464169-43464494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 147
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr18:17944111-17943789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr18:21304105-21303778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
27, 5
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr18:29797483-29797808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr18:55554852-55554528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 149
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr18:19310752-19310439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 141
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr18:32210216-32210445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
160, 138
               

               
Conread position:
               
3-293
               

               
Cow position:
               
chr18:7050184-7049894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr18:21797687-21797372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
160, 37
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr18:17323974-17323659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr18:17335142-17335461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 141
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr18:50092845-50093167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 147
               

               
Conread position:
               
5-324
               

               
Cow position:
               
chr18:41238128-41237818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 137
               

               
Conread position:
               
6-130
               

               
Cow position:
               
chr18:51679612-51679739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
6-173
               

               
Cow position:
               
chr18:27833830-27833997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
6-188
               

               
Cow position:
               
chr18:27995275-27995093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
6-194
               

               
Cow position:
               
chr18:29586016-29586204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
6-195
               

               
Cow position:
               
chr18:33616826-33617014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
6-203
               

               
Cow position:
               
chr18:7946296-7946103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr18:11271407-11271606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr18:3149138-3149355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr18:15911713-15911500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr18:36135042-36135258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr18:51345884-51345670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 131
               

               
Conread position:
               
6-221
               

               
Cow position:
               
chr18:4954741-4954531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 69
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr18:42628960-42628733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr18:16641044-16640814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
6-257
               

               
Cow position:
               
chr18:21579958-21580209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-259
               

               
Cow position:
               
chr18:26305868-26305616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr18:51580189-51580443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
6-273
               

               
Cow position:
               
chr18:19462866-19463133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 139
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr18:52698223-52697957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr18:52656390-52656117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr18:55436538-55436812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr18:42609080-42609359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr18:3190340-3190057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 144
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr18:33505413-33505691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
6-316
               

               
Cow position:
               
chr18:28928010-28928309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
6-316
               

               
Cow position:
               
chr18:30844310-30844618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
6-321
               

               
Cow position:
               
chr18:37733285-37732970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr18:16226817-16226512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr18:25923967-25923666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 108
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:5536569-5536251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:6733370-6733684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 140
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:14419573-14419256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 141
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:16094477-16094164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 30
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:23701207-23701519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:27540018-27539711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:28968693-28969010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 141
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:29863012-29863325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 29
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:29947044-29946737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
58, 136
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:32164335-32164652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:36512223-36511913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 30
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:37509558-37509247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 136
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:37692689-37693008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 130
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:38157946-38158263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 136
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:40484595-40484279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:41837494-41837811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 144
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:43430597-43430285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:51485183-51484870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr18:54065479-54065793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:602868-603187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:10292327-10292008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:11870083-11869764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:13270506-13270187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:16173017-16173336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 141
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:16463054-16463369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:16857381-16857065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 156
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:18215417-18215736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:19356103-19355790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 72
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:19461876-19461557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:23688768-23688449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:24037250-24037569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:27990353-27990034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:29072013-29071698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:29079333-29079014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:30607292-30606973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:31139345-31139029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:35443781-35444091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:39002541-39002833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 27
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:40195707-40195390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:47745349-47745030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:51459249-51459564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:51602069-51602388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:51663770-51663454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 136
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:51690393-51690074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 141
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:51698235-51697923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 135
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:52574697-52574392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:52629662-52629981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr18:54047475-54047156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr18:14127691-14128025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 100
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr18:26242863-26243197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 142
               

               
Conread position:
               
7-326
               

               
Cow position:
               
chr18:10221095-10221407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
7-326
               

               
Cow position:
               
chr18:25355116-25354794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 142
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr18:7649243-7649040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
9-304
               

               
Cow position:
               
chr18:33498383-33498672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr18:30035141-30035450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 67
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr18:33503266-33503566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr18:35293704-35293395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 27
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr18:52696465-52696163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 125
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr18:43473181-43472875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 33
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr18:51654188-51653877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
10-205
               

               
Cow position:
               
chr18:15688588-15688399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
153, 24
               

               
Conread position:
               
10-283
               

               
Cow position:
               
chr18:46869734-46869475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
153, 24
               

               
Conread position:
               
10-324
               

               
Cow position:
               
chr18:23802615-23802302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 140
               

               
Conread position:
               
10-324
               

               
Cow position:
               
chr18:54033300-54032997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
10-326
               

               
Cow position:
               
chr18:24620015-24619706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 140
               

               
Conread position:
               
10-343
               

               
Cow position:
               
chr18:36776868-36776537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
11-324
               

               
Cow position:
               
chr18:4949747-4949422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 131
               

               
Conread position:
               
12-324
               

               
Cow position:
               
chr18:26335577-26335878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 102
               

               
Conread position:
               
12-324
               

               
Cow position:
               
chr18:52698857-52698552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr18:44261654-44261323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 134
               

               
Conread position:
               
13-230
               

               
Cow position:
               
chr18:33158123-33157908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
13-321
               

               
Cow position:
               
chr18:36187809-36188108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
120, 24
               

               
Conread position:
               
13-324
               

               
Cow position:
               
chr18:42080438-42080737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
14-307
               

               
Cow position:
               
chr18:33607810-33607530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
16-315
               

               
Cow position:
               
chr18:48501061-48500788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
147, 20
               

               
Conread position:
               
16-326
               

               
Cow position:
               
chr18:35057608-35057303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 125
               

               
Conread position:
               
17-160
               

               
Cow position:
               
chr18:6006254-6006395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 113
               

               
Conread position:
               
17-324
               

               
Cow position:
               
chr18:1022444-1022740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
18-316
               

               
Cow position:
               
chr18:8965873-8965597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 124
               

               
Conread position:
               
19-139
               

               
Cow position:
               
chr18:33792141-33792022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
21-304
               

               
Cow position:
               
chr18:33851107-33850828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 122
               

               
Conread position:
               
21-316
               

               
Cow position:
               
chr18:28084625-28084333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
144, 121
               

               
Conread position:
               
22-295
               

               
Cow position:
               
chr18:6866804-6866534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 121
               

               
Conread position:
               
23-242
               

               
Cow position:
               
chr18:24219116-24219332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
107, 120
               

               
Conread position:
               
25-284
               

               
Cow position:
               
chr18:36122287-36122544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
115, 62
               

               
Conread position:
               
25-305
               

               
Cow position:
               
chr18:53872467-53872190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
26-203
               

               
Cow position:
               
chr18:21199532-21199705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
136, 8
               

               
Conread position:
               
34-268
               

               
Cow position:
               
chr18:29240884-29240655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 87
               

               
Conread position:
               
34-290
               

               
Cow position:
               
chr18:51464930-51465185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
129, 107
               

               
Conread position:
               
34-290
               

               
Cow position:
               
chr18:51610548-51610293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
129, 107
               

               
Conread position:
               
34-305
               

               
Cow position:
               
chr18:55136908-55137173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
57, 102
               

               
Conread position:
               
35-315
               

               
Cow position:
               
chr18:30232001-30232271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
128, 83
               

               
Conread position:
               
40-209
               

               
Cow position:
               
chr18:36477335-36477174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
119, 73
               

               
Conread position:
               
40-321
               

               
Cow position:
               
chr18:15858721-15858447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
40-324
               

               
Cow position:
               
chr18:52462516-52462797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
89, 64
               

               
Conread position:
               
41-324
               

               
Cow position:
               
chr18:52479608-52479338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
73, 60
               

               
Conread position:
               
46-324
               

               
Cow position:
               
chr18:33522771-33522506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 88
               

               
Conread position:
               
47-282
               

               
Cow position:
               
chr18:20151156-20150929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
116, 47
               

               
Conread position:
               
47-316
               

               
Cow position:
               
chr18:33406860-33406594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 94
               

               
Conread position:
               
47-323
               

               
Cow position:
               
chr18:48240883-48240632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
47-324
               

               
Cow position:
               
chr18:10113560-10113294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
247, 94
               

               
Conread position:
               
47-324
               

               
Cow position:
               
chr18:47985442-47985176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 97
               

               
Conread position:
               
48-314
               

               
Cow position:
               
chr18:4890064-4889805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
47, 102
               

               
Conread position:
               
52-301
               

               
Cow position:
               
chr18:22790864-22791122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
60-324
               

               
Cow position:
               
chr18:29767970-29767708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
63-326
               

               
Cow position:
               
chr18:56483134-56483387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
68-324
               

               
Cow position:
               
chr18:10896719-10896473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
95, 73
               

               
Conread position:
               
71-254
               

               
Cow position:
               
chr18:36908332-36908512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
71-254
               

               
Cow position:
               
chr18:36912861-36913041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 70
               

               
Conread position:
               
94-322
               

               
Cow position:
               
chr18:33272139-33271918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
94-323
               

               
Cow position:
               
chr18:22412896-22412661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
105-326
               

               
Cow position:
               
chr18:37582964-37583180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
122-323
               

               
Cow position:
               
chr18:14965769-14965565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
25, 197
               

               
Conread position:
               
145-271
               

               
Cow position:
               
chr18:44229798-44229924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
146-326
               

               
Cow position:
               
chr18:32436644-32436824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
150-326
               

               
Cow position:
               
chr18:50834932-50835108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
13, 168
               

               
Conread position:
               
166-316
               

               
Cow position:
               
chr18:8257510-8257362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
166-324
               

               
Cow position:
               
chr18:31564245-31564407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
31, 138
               

               
Conread position:
               
385-619
               

               
Cow position:
               
chr18:43019573-43019339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 95
               
Show alignments to all cow chromosomes.