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Cow genome map

           
Conread name:
           
mH0-MI-P-HO-afz-d-08-1-UM.s1
        

               
Conread position:
               
1-136
               

               
Cow position:
               
chr22:27510579-27510439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr22:23077526-23077665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr22:4076590-4076726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr22:13768779-13768627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr22:31870965-31871119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 29
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr22:322321-322495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
157, 14
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr22:3303127-3303304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
162, 33
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr22:1484149-1483967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr22:645435-645625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr22:1325719-1325524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 146
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr22:11806115-11806302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
162, 32
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:5338318-5338527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
66, 28
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr22:5624136-5624342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 143
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr22:19168931-19168709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 143
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr22:799372-799145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 149
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr22:25765206-25765434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr22:33113642-33113403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 144
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr22:5929401-5929653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr22:865224-865487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr22:22285502-22285238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr22:37032372-37032635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:33448797-33449067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr22:45106619-45106892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 144
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr22:23582307-23582592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 140
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr22:42234277-42233999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr22:39473100-39473397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 150
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr22:31645606-31645320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr22:29062289-29061997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
162, 20
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr22:47957761-47958058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr22:13017500-13017797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 31
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr22:31598812-31598507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
162, 35
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr22:2531590-2531895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 149
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr22:35755185-35755493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr22:15872298-15871995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 151
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr22:52017-51704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr22:13209882-13209574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
162, 15
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr22:41972048-41972348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr22:3807183-3806878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 143
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr22:533598-533289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 35
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr22:13897140-13896828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr22:2389888-2390199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
228, 5
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr22:5315748-5315426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 143
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr22:25340654-25340339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 36
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr22:32019056-32019373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr22:36503201-36503515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr22:38439865-38440182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr22:44924826-44925140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 58
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:1310436-1310757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 141
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:3065296-3065614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:12728160-12728476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 32
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:13696419-13696736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 33
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:15953502-15953815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:17324995-17325317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 149
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:18233378-18233059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:19048274-19048586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:24817258-24817578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:29012671-29012348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 146
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:30092297-30091988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 142
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:35934463-35934783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:36208205-36207891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 60
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:41387909-41387584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr22:2415401-2415080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr22:4292149-4291847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
15, 145
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr22:10330641-10330343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 14
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr22:40373892-40373574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr22:43261369-43261048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 142
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr22:14005440-14005125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr22:27335233-27334900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
162, 36
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr22:7156147-7155825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 31
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr22:33200778-33200448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 29
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr22:34607985-34607656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr22:41946212-41946549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr22:11305394-11305045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
2-115
               

               
Cow position:
               
chr22:5930825-5930937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
2-136
               

               
Cow position:
               
chr22:34894055-34893918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr22:15356507-15356217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
36, 32
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr22:46033725-46033418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
3-134
               

               
Cow position:
               
chr22:31212867-31212737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
3-137
               

               
Cow position:
               
chr22:9685310-9685174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr22:11599754-11599559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr22:25942735-25942507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
136, 29
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr22:1591541-1591291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr22:3012218-3011949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
160, 32
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr22:33093842-33093551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 143
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr22:1027512-1027212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr22:36785201-36784900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr22:43789230-43788914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 142
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr22:23864313-23863999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 138
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr22:45013476-45013788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr22:16203302-16202971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 158
               

               
Conread position:
               
4-224
               

               
Cow position:
               
chr22:28996805-28997025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
37, 138
               

               
Conread position:
               
4-326
               

               
Cow position:
               
chr22:20237070-20237391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
4-326
               

               
Cow position:
               
chr22:30675233-30675544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 28
               

               
Conread position:
               
5-322
               

               
Cow position:
               
chr22:18188687-18188399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
20, 136
               

               
Conread position:
               
5-323
               

               
Cow position:
               
chr22:8339912-8339603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 56
               

               
Conread position:
               
6-133
               

               
Cow position:
               
chr22:7304000-7304128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
6-133
               

               
Cow position:
               
chr22:19712887-19713017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
6-133
               

               
Cow position:
               
chr22:22563171-22563041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
6-136
               

               
Cow position:
               
chr22:9277292-9277167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
6-137
               

               
Cow position:
               
chr22:6928731-6928598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
6-168
               

               
Cow position:
               
chr22:22278594-22278432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 136
               

               
Conread position:
               
6-188
               

               
Cow position:
               
chr22:14845260-14845442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr22:11643429-11643627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
6-210
               

               
Cow position:
               
chr22:37272053-37271847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 157
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr22:15869181-15868978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
157, 52
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr22:46566473-46566686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 136
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr22:46583157-46583370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 136
               

               
Conread position:
               
6-224
               

               
Cow position:
               
chr22:13243090-13243308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr22:31593763-31593989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr22:27386054-27386281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
6-245
               

               
Cow position:
               
chr22:21935372-21935606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
210, 28
               

               
Conread position:
               
6-245
               

               
Cow position:
               
chr22:33379041-33379280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-253
               

               
Cow position:
               
chr22:22663576-22663823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
6-254
               

               
Cow position:
               
chr22:102424-102176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
6-254
               

               
Cow position:
               
chr22:35667976-35668223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
6-273
               

               
Cow position:
               
chr22:11127592-11127326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
6-273
               

               
Cow position:
               
chr22:11231792-11232058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
17, 143
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr22:29553682-29553951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr22:8417753-8417474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 137
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr22:18030725-18030452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 136
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr22:28714401-28714118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 144
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr22:9285240-9285527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-294
               

               
Cow position:
               
chr22:22048698-22048986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 136
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr22:1521971-1522263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
6-299
               

               
Cow position:
               
chr22:13552858-13552565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 139
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr22:14807756-14807462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
6-315
               

               
Cow position:
               
chr22:981824-981515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
6-315
               

               
Cow position:
               
chr22:13721239-13721538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr22:33951457-33951765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr22:11754151-11754456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr22:12225402-12225710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 125
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr22:21592925-21592609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 144
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr22:28785613-28785305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 121
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr22:29464392-29464077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 143
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr22:39465039-39465355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 144
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:1517539-1517857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:6340154-6339839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 143
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:8773503-8773821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 144
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:9269701-9269383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:15308460-15308778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 136
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:15858281-15857962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 143
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:18603309-18603626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 136
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:18807732-18808047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 143
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:19140204-19140520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 144
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:19600299-19600617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 236
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:19822693-19822376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 142
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:30918570-30918275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:31316045-31315728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:31331370-31331687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:32210114-32209796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:34171952-34171635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:36188554-36188236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 144
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:37290352-37290657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:41846067-41846380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 143
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:42499864-42500181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chr22:42994672-42994358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr22:540637-540318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 156
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr22:44462800-44462482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 143
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:697434-697115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:3274855-3275174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:3488834-3489153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:8776216-8776535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:8881638-8881329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:10550368-10550049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:10576986-10577305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:15013191-15013506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:15174570-15174889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:20569540-20569858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:21192712-21193019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:22107544-22107226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:22607660-22607341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:25241030-25241343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:25336653-25336334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 156
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:26089734-26090053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:27306462-27306781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 140
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:32811709-32812028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:32943950-32943631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:39902883-39902564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:40828565-40828885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:44099566-44099886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:44365708-44366027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 154
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr22:45281445-45281132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr22:3433461-3433796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 144
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr22:10906708-10907038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr22:44382227-44381892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 144
               

               
Conread position:
               
6-348
               

               
Cow position:
               
chr22:43279981-43280321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
7-188
               

               
Cow position:
               
chr22:3941558-3941377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
18, 135
               

               
Conread position:
               
7-267
               

               
Cow position:
               
chr22:11767339-11767579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
7-275
               

               
Cow position:
               
chr22:36564762-36565013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
6, 65
               

               
Conread position:
               
7-323
               

               
Cow position:
               
chr22:15920340-15920644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 24
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr22:14510021-14510332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 25
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr22:29397581-29397269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr22:35903730-35904027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr22:39443522-39443820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
7-325
               

               
Cow position:
               
chr22:35909984-35910304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 146
               

               
Conread position:
               
8-250
               

               
Cow position:
               
chr22:31416944-31416701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
8-321
               

               
Cow position:
               
chr22:36357554-36357245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 114
               

               
Conread position:
               
8-324
               

               
Cow position:
               
chr22:11988208-11988521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 133
               

               
Conread position:
               
8-324
               

               
Cow position:
               
chr22:38553727-38553421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 13
               

               
Conread position:
               
9-137
               

               
Cow position:
               
chr22:13081509-13081638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr22:1280115-1280308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 28
               

               
Conread position:
               
9-220
               

               
Cow position:
               
chr22:15173839-15173629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
9-291
               

               
Cow position:
               
chr22:34901356-34901084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 12
               

               
Conread position:
               
9-317
               

               
Cow position:
               
chr22:6924530-6924233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 133
               

               
Conread position:
               
9-323
               

               
Cow position:
               
chr22:32894403-32894094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 25
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr22:11837927-11838234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 135
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr22:12625066-12625372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr22:18811416-18811728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr22:19597468-19597775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 27
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr22:30514534-30514228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
154, 26
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr22:31306728-31306429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 135
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr22:34605666-34605369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr22:37535832-37536146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 28
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr22:699436-699128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 27
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr22:8299638-8299329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr22:25968173-25968477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 26
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr22:29855348-29855032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
9-327
               

               
Cow position:
               
chr22:3270341-3270646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
150, 36
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr22:42807507-42807693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 132
               

               
Conread position:
               
10-302
               

               
Cow position:
               
chr22:8876545-8876246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
10-316
               

               
Cow position:
               
chr22:36555648-36555956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
10-323
               

               
Cow position:
               
chr22:14731543-14731854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
210, 27
               

               
Conread position:
               
10-324
               

               
Cow position:
               
chr22:10361414-10361110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 11
               

               
Conread position:
               
10-326
               

               
Cow position:
               
chr22:46578209-46578521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 136
               

               
Conread position:
               
11-136
               

               
Cow position:
               
chr22:45196660-45196541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr22:22862277-22862496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
151, 35
               

               
Conread position:
               
12-313
               

               
Cow position:
               
chr22:8734046-8734341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
12-315
               

               
Cow position:
               
chr22:15497486-15497186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
79, 42
               

               
Conread position:
               
12-324
               

               
Cow position:
               
chr22:33901810-33902118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 127
               

               
Conread position:
               
12-343
               

               
Cow position:
               
chr22:12868966-12869289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 33
               

               
Conread position:
               
13-214
               

               
Cow position:
               
chr22:17834340-17834535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
150, 22
               

               
Conread position:
               
13-262
               

               
Cow position:
               
chr22:29633122-29633367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
13-280
               

               
Cow position:
               
chr22:6493362-6493102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
168, 0
               

               
Conread position:
               
13-291
               

               
Cow position:
               
chr22:36572047-36572323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr22:15057761-15057492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 128
               

               
Conread position:
               
14-295
               

               
Cow position:
               
chr22:10314114-10313840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
149, 21
               

               
Conread position:
               
14-324
               

               
Cow position:
               
chr22:30963388-30963086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
16-244
               

               
Cow position:
               
chr22:46627151-46627372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
5, 22
               

               
Conread position:
               
16-324
               

               
Cow position:
               
chr22:28130241-28129938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
17-214
               

               
Cow position:
               
chr22:11746633-11746818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
146, 20
               

               
Conread position:
               
17-260
               

               
Cow position:
               
chr22:36540882-36541116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
17-307
               

               
Cow position:
               
chr22:26338791-26338523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
17-321
               

               
Cow position:
               
chr22:15942242-15942542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
17-321
               

               
Cow position:
               
chr22:43045229-43045526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
252, 20
               

               
Conread position:
               
17-323
               

               
Cow position:
               
chr22:7280026-7279730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
155, 26
               

               
Conread position:
               
17-324
               

               
Cow position:
               
chr22:18122307-18122593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
17-326
               

               
Cow position:
               
chr22:32951717-32951423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
146, 124
               

               
Conread position:
               
17-348
               

               
Cow position:
               
chr22:40589891-40589552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
18-324
               

               
Cow position:
               
chr22:26759446-26759150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
20-205
               

               
Cow position:
               
chr22:44496318-44496136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
143, 119
               

               
Conread position:
               
21-294
               

               
Cow position:
               
chr22:20087848-20087582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 23
               

               
Conread position:
               
21-323
               

               
Cow position:
               
chr22:13775973-13775685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
21-324
               

               
Cow position:
               
chr22:7231402-7231112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
74, 20
               

               
Conread position:
               
21-326
               

               
Cow position:
               
chr22:45845385-45845082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
141, 49
               

               
Conread position:
               
22-218
               

               
Cow position:
               
chr22:25906007-25905814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
140, 119
               

               
Conread position:
               
27-198
               

               
Cow position:
               
chr22:5331305-5331468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
136, 106
               

               
Conread position:
               
32-305
               

               
Cow position:
               
chr22:32660748-32660483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 109
               

               
Conread position:
               
33-322
               

               
Cow position:
               
chr22:18191998-18191718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 23
               

               
Conread position:
               
34-288
               

               
Cow position:
               
chr22:5836017-5835770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 107
               

               
Conread position:
               
34-324
               

               
Cow position:
               
chr22:9371828-9371543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 110
               

               
Conread position:
               
37-324
               

               
Cow position:
               
chr22:26104671-26104954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 110
               

               
Conread position:
               
38-259
               

               
Cow position:
               
chr22:41494658-41494876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
125, 104
               

               
Conread position:
               
40-219
               

               
Cow position:
               
chr22:17853686-17853863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 100
               

               
Conread position:
               
40-305
               

               
Cow position:
               
chr22:47462697-47462435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
123, 86
               

               
Conread position:
               
40-323
               

               
Cow position:
               
chr22:17781486-17781765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
40-348
               

               
Cow position:
               
chr22:34931617-34931918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 18
               

               
Conread position:
               
42-315
               

               
Cow position:
               
chr22:2561000-2561277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 93
               

               
Conread position:
               
44-316
               

               
Cow position:
               
chr22:11779312-11779575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 32
               

               
Conread position:
               
46-305
               

               
Cow position:
               
chr22:1080346-1080095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
117, 92
               

               
Conread position:
               
46-316
               

               
Cow position:
               
chr22:28043778-28043506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
114, 81
               

               
Conread position:
               
46-343
               

               
Cow position:
               
chr22:27223381-27223670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
47-242
               

               
Cow position:
               
chr22:47927107-47926917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 65
               

               
Conread position:
               
47-324
               

               
Cow position:
               
chr22:9728524-9728788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
47-324
               

               
Cow position:
               
chr22:11036932-11036672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
47-324
               

               
Cow position:
               
chr22:46611579-46611837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
116, 28
               

               
Conread position:
               
47-326
               

               
Cow position:
               
chr22:10602308-10602039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 61
               

               
Conread position:
               
51-324
               

               
Cow position:
               
chr22:5015543-5015272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 98
               

               
Conread position:
               
54-316
               

               
Cow position:
               
chr22:1036331-1036071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
54-324
               

               
Cow position:
               
chr22:1625236-1624976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
176, 79
               

               
Conread position:
               
58-323
               

               
Cow position:
               
chr22:29955744-29956005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
105, 75
               

               
Conread position:
               
62-305
               

               
Cow position:
               
chr22:288192-288429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 71
               

               
Conread position:
               
64-316
               

               
Cow position:
               
chr22:45354275-45354011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
64-324
               

               
Cow position:
               
chr22:12968965-12969219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 80
               

               
Conread position:
               
70-323
               

               
Cow position:
               
chr22:24186462-24186216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
70-343
               

               
Cow position:
               
chr22:34758626-34758896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 77
               

               
Conread position:
               
74-324
               

               
Cow position:
               
chr22:33387345-33387582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
76-316
               

               
Cow position:
               
chr22:36584205-36584437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
75, 62
               

               
Conread position:
               
78-276
               

               
Cow position:
               
chr22:4645024-4644829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 63
               

               
Conread position:
               
85-324
               

               
Cow position:
               
chr22:36858126-36858351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
94-324
               

               
Cow position:
               
chr22:15055977-15055756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
94-326
               

               
Cow position:
               
chr22:5312336-5312564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
94-327
               

               
Cow position:
               
chr22:13185215-13184990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
69, 50
               

               
Conread position:
               
106-324
               

               
Cow position:
               
chr22:6202073-6202281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
145-316
               

               
Cow position:
               
chr22:18195060-18194890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 150
               

               
Conread position:
               
145-324
               

               
Cow position:
               
chr22:557339-557517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
18, 148
               

               
Conread position:
               
146-324
               

               
Cow position:
               
chr22:46568726-46568904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
17, 172
               

               
Conread position:
               
146-326
               

               
Cow position:
               
chr22:3714140-3714320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 172
               

               
Conread position:
               
146-326
               

               
Cow position:
               
chr22:43236200-43236020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 172
               

               
Conread position:
               
150-273
               

               
Cow position:
               
chr22:14699738-14699860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
151-324
               

               
Cow position:
               
chr22:46022278-46022106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
9, 116
               

               
Conread position:
               
151-326
               

               
Cow position:
               
chr22:37270449-37270279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
155-326
               

               
Cow position:
               
chr22:11698254-11698425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 163
               

               
Conread position:
               
164-343
               

               
Cow position:
               
chr22:31312146-31311974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
165-324
               

               
Cow position:
               
chr22:323830-323983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
166-325
               

               
Cow position:
               
chr22:9355513-9355355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
167-304
               

               
Cow position:
               
chr22:46387127-46386990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.