Cow genome map
| Conread name: | mH0-MI-P-HO-afz-d-08-1-UM.s1 |
| Conread position: | 1-137 |
| Cow position: | chr27:24055183-24055051 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-141 |
| Cow position: | chr27:13844212-13844355 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-185 |
| Cow position: | chr27:13409496-13409312 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 143 |
| Conread position: | 1-200 |
| Cow position: | chr27:8262340-8262140 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 145 |
| Conread position: | 1-210 |
| Cow position: | chr27:18559434-18559642 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 140 |
| Conread position: | 1-225 |
| Cow position: | chr27:816262-816484 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 1-260 |
| Cow position: | chr27:30583402-30583660 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 82, 36 |
| Conread position: | 1-261 |
| Cow position: | chr27:11490122-11489862 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 143 |
| Conread position: | 1-266 |
| Cow position: | chr27:27192848-27193111 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 1-284 |
| Cow position: | chr27:1502011-1501732 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 162, 129 |
| Conread position: | 1-286 |
| Cow position: | chr27:11256186-11256463 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 25, 142 |
| Conread position: | 1-299 |
| Cow position: | chr27:21283745-21284032 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 147 |
| Conread position: | 1-305 |
| Cow position: | chr27:8592878-8592578 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 138, 34 |
| Conread position: | 1-305 |
| Cow position: | chr27:9262777-9263081 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 27, 148 |
| Conread position: | 1-305 |
| Cow position: | chr27:25784263-25784557 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 1-311 |
| Cow position: | chr27:4824319-4824014 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 1-321 |
| Cow position: | chr27:13182789-13183090 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 36 |
| Conread position: | 1-322 |
| Cow position: | chr27:21350348-21350029 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 146 |
| Conread position: | 1-323 |
| Cow position: | chr27:1141201-1140878 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 17, 5 |
| Conread position: | 1-323 |
| Cow position: | chr27:4331238-4331560 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 96 |
| Conread position: | 1-323 |
| Cow position: | chr27:15272573-15272888 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 137 |
| Conread position: | 1-323 |
| Cow position: | chr27:18954543-18954223 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 27, 40 |
| Conread position: | 1-323 |
| Cow position: | chr27:29467429-29467110 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 148 |
| Conread position: | 1-324 |
| Cow position: | chr27:1536671-1536349 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 136 |
| Conread position: | 1-324 |
| Cow position: | chr27:12282188-12281869 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 162, 140 |
| Conread position: | 1-324 |
| Cow position: | chr27:13317056-13316742 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 97 |
| Conread position: | 1-324 |
| Cow position: | chr27:25800710-25801026 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 143 |
| Conread position: | 1-331 |
| Cow position: | chr27:25799754-25799429 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 30 |
| Conread position: | 1-343 |
| Cow position: | chr27:11434667-11434336 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 1-343 |
| Cow position: | chr27:26856541-26856219 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 27, 143 |
| Conread position: | 1-345 |
| Cow position: | chr27:12262017-12262353 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 28, 150 |
| Conread position: | 1-348 |
| Cow position: | chr27:31249732-31249397 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 3-212 |
| Cow position: | chr27:12114974-12115179 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 3-292 |
| Cow position: | chr27:12239566-12239278 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 113 |
| Conread position: | 3-305 |
| Cow position: | chr27:8959517-8959819 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 147 |
| Conread position: | 3-323 |
| Cow position: | chr27:5990551-5990866 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 160, 29 |
| Conread position: | 3-324 |
| Cow position: | chr27:26785314-26785001 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 139 |
| Conread position: | 3-348 |
| Cow position: | chr27:2557495-2557836 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 140 |
| Conread position: | 5-302 |
| Cow position: | chr27:344433-344730 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 141 |
| Conread position: | 6-133 |
| Cow position: | chr27:8187328-8187202 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 6-133 |
| Cow position: | chr27:9989383-9989513 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 6-176 |
| Cow position: | chr27:723851-723681 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 143 |
| Conread position: | 6-195 |
| Cow position: | chr27:13422668-13422857 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 140 |
| Conread position: | 6-209 |
| Cow position: | chr27:29811800-29811596 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 125 |
| Conread position: | 6-214 |
| Cow position: | chr27:19300070-19300278 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 18, 135 |
| Conread position: | 6-216 |
| Cow position: | chr27:28984261-28984055 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 99 |
| Conread position: | 6-232 |
| Cow position: | chr27:791550-791776 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 140 |
| Conread position: | 6-267 |
| Cow position: | chr27:16331983-16332243 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 138 |
| Conread position: | 6-267 |
| Cow position: | chr27:17476719-17476972 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 6-273 |
| Cow position: | chr27:3649977-3649710 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 6-316 |
| Cow position: | chr27:9970667-9970357 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 6-316 |
| Cow position: | chr27:15033395-15033705 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 6-322 |
| Cow position: | chr27:19423882-19424196 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 140 |
| Conread position: | 6-324 |
| Cow position: | chr27:2331999-2331682 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 136 |
| Conread position: | 6-324 |
| Cow position: | chr27:9333163-9332857 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 143 |
| Conread position: | 6-324 |
| Cow position: | chr27:10383927-10383626 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 19, 139 |
| Conread position: | 6-324 |
| Cow position: | chr27:15633847-15634163 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 144 |
| Conread position: | 6-324 |
| Cow position: | chr27:19932061-19932387 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 6-324 |
| Cow position: | chr27:20810912-20810600 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 136 |
| Conread position: | 6-324 |
| Cow position: | chr27:24295764-24296090 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 136 |
| Conread position: | 6-324 |
| Cow position: | chr27:26330428-26330111 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 136 |
| Conread position: | 6-326 |
| Cow position: | chr27:165424-165742 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 6-326 |
| Cow position: | chr27:3653204-3653523 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 6-326 |
| Cow position: | chr27:12006644-12006325 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 6-326 |
| Cow position: | chr27:13353802-13353483 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 140 |
| Conread position: | 6-326 |
| Cow position: | chr27:14297703-14297384 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 141 |
| Conread position: | 6-326 |
| Cow position: | chr27:16030901-16031220 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 6-326 |
| Cow position: | chr27:22797163-22797480 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 144 |
| Conread position: | 6-326 |
| Cow position: | chr27:29035886-29036203 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 132 |
| Conread position: | 6-331 |
| Cow position: | chr27:8201431-8201110 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 144 |
| Conread position: | 6-331 |
| Cow position: | chr27:10579439-10579119 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 6-343 |
| Cow position: | chr27:5983534-5983869 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 6-348 |
| Cow position: | chr27:3232042-3232379 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 28 |
| Conread position: | 7-183 |
| Cow position: | chr27:28907738-28907912 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 7-268 |
| Cow position: | chr27:15100136-15099876 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 7-324 |
| Cow position: | chr27:1189157-1188845 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 142 |
| Conread position: | 7-324 |
| Cow position: | chr27:15871837-15872140 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 7-324 |
| Cow position: | chr27:27291888-27291568 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 135 |
| Conread position: | 8-196 |
| Cow position: | chr27:10324436-10324620 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 103 |
| Conread position: | 8-322 |
| Cow position: | chr27:11481425-11481112 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 142 |
| Conread position: | 8-326 |
| Cow position: | chr27:1521168-1520857 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 142 |
| Conread position: | 8-326 |
| Cow position: | chr27:2001339-2001022 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 142 |
| Conread position: | 9-310 |
| Cow position: | chr27:25112644-25112354 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 142, 28 |
| Conread position: | 9-316 |
| Cow position: | chr27:30783396-30783090 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 9-323 |
| Cow position: | chr27:2682009-2681703 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 24 |
| Conread position: | 9-323 |
| Cow position: | chr27:8972936-8972624 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 133 |
| Conread position: | 9-326 |
| Cow position: | chr27:15866815-15867118 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 23 |
| Conread position: | 10-321 |
| Cow position: | chr27:5925749-5925454 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 10-323 |
| Cow position: | chr27:14380795-14380484 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 127 |
| Conread position: | 10-323 |
| Cow position: | chr27:15870528-15870830 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 134 |
| Conread position: | 10-324 |
| Cow position: | chr27:19523218-19523529 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 135 |
| Conread position: | 11-221 |
| Cow position: | chr27:4834635-4834427 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 11-279 |
| Cow position: | chr27:14669677-14669413 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 152, 24 |
| Conread position: | 11-321 |
| Cow position: | chr27:3990309-3990619 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 139 |
| Conread position: | 11-323 |
| Cow position: | chr27:21392498-21392192 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 130 |
| Conread position: | 11-324 |
| Cow position: | chr27:27557291-27556985 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 11-327 |
| Cow position: | chr27:13901615-13901300 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 139 |
| Conread position: | 11-343 |
| Cow position: | chr27:8427338-8427018 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 91 |
| Conread position: | 12-250 |
| Cow position: | chr27:27054006-27054243 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 12-306 |
| Cow position: | chr27:4389475-4389199 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 166, 126 |
| Conread position: | 12-324 |
| Cow position: | chr27:5914415-5914112 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 12-326 |
| Cow position: | chr27:30036358-30036046 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 134 |
| Conread position: | 13-268 |
| Cow position: | chr27:19388710-19388958 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 13-324 |
| Cow position: | chr27:21451927-21451623 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 24 |
| Conread position: | 13-327 |
| Cow position: | chr27:27930682-27930384 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 121 |
| Conread position: | 13-343 |
| Cow position: | chr27:8291326-8291004 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 28 |
| Conread position: | 17-324 |
| Cow position: | chr27:16428132-16427842 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 146, 20 |
| Conread position: | 21-130 |
| Cow position: | chr27:13273044-13272936 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 21-217 |
| Cow position: | chr27:2936299-2936107 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 142, 61 |
| Conread position: | 21-264 |
| Cow position: | chr27:9090116-9089883 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 21-326 |
| Cow position: | chr27:27729013-27729310 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 22-316 |
| Cow position: | chr27:4982849-4982558 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 125 |
| Conread position: | 23-316 |
| Cow position: | chr27:30306793-30307083 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 124 |
| Conread position: | 24-343 |
| Cow position: | chr27:15406095-15405789 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 94, 11 |
| Conread position: | 31-229 |
| Cow position: | chr27:491551-491357 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 132, 108 |
| Conread position: | 33-283 |
| Cow position: | chr27:30677620-30677860 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 130, 100 |
| Conread position: | 34-324 |
| Cow position: | chr27:16787833-16788117 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 110 |
| Conread position: | 40-326 |
| Cow position: | chr27:22647173-22647455 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 107 |
| Conread position: | 42-305 |
| Cow position: | chr27:26551935-26552188 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 81, 104 |
| Conread position: | 42-348 |
| Cow position: | chr27:4805247-4804943 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 121, 97 |
| Conread position: | 46-305 |
| Cow position: | chr27:22329943-22329697 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 250, 35 |
| Conread position: | 47-220 |
| Cow position: | chr27:26599018-26599189 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 47-326 |
| Cow position: | chr27:1081711-1081985 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 49-316 |
| Cow position: | chr27:10306567-10306304 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 46 |
| Conread position: | 49-343 |
| Cow position: | chr27:15375252-15374975 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 113, 21 |
| Conread position: | 52-324 |
| Cow position: | chr27:23317505-23317763 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 55-251 |
| Cow position: | chr27:1124183-1124380 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 108, 85 |
| Conread position: | 55-324 |
| Cow position: | chr27:27045618-27045356 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 85 |
| Conread position: | 65-324 |
| Cow position: | chr27:15697777-15697529 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 76 |
| Conread position: | 67-324 |
| Cow position: | chr27:27279146-27278890 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 96, 77 |
| Conread position: | 71-326 |
| Cow position: | chr27:13309072-13308821 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 76 |
| Conread position: | 78-282 |
| Cow position: | chr27:526356-526155 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 85, 69 |
| Conread position: | 94-305 |
| Cow position: | chr27:8429416-8429200 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 24 |
| Conread position: | 94-324 |
| Cow position: | chr27:25971195-25971422 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 47 |
| Conread position: | 146-324 |
| Cow position: | chr27:9989845-9990024 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 148 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 17, 173 |
| Conread position: | 146-326 |
| Cow position: | chr27:20001762-20001593 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 120 |
| Conread position: | 150-312 |
| Cow position: | chr27:24055059-24054898 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 7, 89 |
| Conread position: | 152-323 |
| Cow position: | chr27:27469183-27469352 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 166-316 |
| Cow position: | chr27:15544351-15544201 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.