Cow genome map
Conread name: | mH1-MI-P-H1-afo-h-06-1-UM.s1 |
Conread position: | 132-527 |
Cow position: | chrX:43437321-43437734 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 269 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 47, 42 |
Conread position: | 134-368 |
Cow position: | chrX:38963133-38963376 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 163 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-438 |
Cow position: | chrX:20366591-20366904 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 215 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 103, 19 |
Conread position: | 134-439 |
Cow position: | chrX:29010049-29009745 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 204 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 117, 56 |
Conread position: | 134-502 |
Cow position: | chrX:29891687-29891306 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 238 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 105, 140 |
Conread position: | 134-503 |
Cow position: | chrX:19608257-19607871 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 245 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 45, 39 |
Conread position: | 134-519 |
Cow position: | chrX:2579001-2578605 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 249 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 51, 40 |
Conread position: | 134-519 |
Cow position: | chrX:27317811-27317409 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 260 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 45, 38 |
Conread position: | 134-520 |
Cow position: | chrX:21646700-21647097 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 254 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 45, 37 |
Conread position: | 134-523 |
Cow position: | chrX:12345517-12345112 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 252 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 45, 39 |
Conread position: | 134-523 |
Cow position: | chrX:19398358-19397950 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 258 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-523 |
Cow position: | chrX:21226061-21225655 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 256 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-526 |
Cow position: | chrX:2813895-2814306 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 258 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 56, 257 |
Conread position: | 134-526 |
Cow position: | chrX:9010914-9010507 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 261 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-526 |
Cow position: | chrX:11146756-11147168 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 263 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-526 |
Cow position: | chrX:11462413-11462822 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 262 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 105, 190 |
Conread position: | 134-526 |
Cow position: | chrX:12308182-12308592 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 259 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-526 |
Cow position: | chrX:14597437-14597027 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 261 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 45, 38 |
Conread position: | 134-526 |
Cow position: | chrX:15992891-15992502 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 251 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 126, 44 |
Conread position: | 134-526 |
Cow position: | chrX:16045552-16045142 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 263 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 45, 38 |
Conread position: | 134-526 |
Cow position: | chrX:22818655-22818247 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 261 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-526 |
Cow position: | chrX:23279607-23279198 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 261 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 103, 161 |
Conread position: | 134-526 |
Cow position: | chrX:24770276-24770684 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 262 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-526 |
Cow position: | chrX:29171200-29171609 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 257 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-526 |
Cow position: | chrX:35532436-35532030 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 257 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 60, 40 |
Conread position: | 134-527 |
Cow position: | chrX:2560367-2560775 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 255 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:3082563-3082963 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 256 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 107, 34 |
Conread position: | 134-527 |
Cow position: | chrX:3418636-3419048 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 258 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 107, 257 |
Conread position: | 134-527 |
Cow position: | chrX:5281202-5281609 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 255 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 107, 302 |
Conread position: | 134-527 |
Cow position: | chrX:5321131-5321542 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 267 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:10867269-10867676 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 260 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 45, 39 |
Conread position: | 134-527 |
Cow position: | chrX:13244239-13243828 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 263 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 45, 38 |
Conread position: | 134-527 |
Cow position: | chrX:13929153-13929560 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 260 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:15978371-15978782 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 263 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:17054151-17053734 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 271 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:18221993-18221589 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 258 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 36, 41 |
Conread position: | 134-527 |
Cow position: | chrX:18657224-18657631 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 259 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 51, 40 |
Conread position: | 134-527 |
Cow position: | chrX:19474568-19474978 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 265 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:20357419-20357830 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 264 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 45, 38 |
Conread position: | 134-527 |
Cow position: | chrX:20725551-20725143 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 262 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:21767213-21766802 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 264 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:22565104-22565515 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 261 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:23387967-23388377 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 263 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:23395187-23394778 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 261 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 105, 253 |
Conread position: | 134-527 |
Cow position: | chrX:23453472-23453882 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 263 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 45, 20 |
Conread position: | 134-527 |
Cow position: | chrX:23573227-23573631 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 251 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:28587562-28587151 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 254 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 45, 39 |
Conread position: | 134-527 |
Cow position: | chrX:28753756-28754167 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 267 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:29094734-29095145 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 262 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:29911915-29911508 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 261 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:30181344-30181755 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 254 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 46, 40 |
Conread position: | 134-527 |
Cow position: | chrX:30437488-30437077 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 262 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:32064587-32064992 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 257 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 45, 40 |
Conread position: | 134-527 |
Cow position: | chrX:36536149-36536556 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 260 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 45, 38 |
Conread position: | 134-527 |
Cow position: | chrX:37814731-37814320 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 259 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 45, 38 |
Conread position: | 134-529 |
Cow position: | chrX:730981-731387 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 263 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 99, 82 |
Conread position: | 134-529 |
Cow position: | chrX:18899242-18899637 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 256 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 106, 19 |
Conread position: | 134-531 |
Cow position: | chrX:8482032-8481621 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 261 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 45, 38 |
Conread position: | 134-535 |
Cow position: | chrX:15990823-15991231 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 251 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 192, 112 |
Conread position: | 134-536 |
Cow position: | chrX:20741048-20741466 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 262 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 45, 28 |
Conread position: | 135-529 |
Cow position: | chrX:17891122-17890715 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 265 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 44, 39 |
Conread position: | 137-507 |
Cow position: | chrX:27645633-27645252 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 252 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 100, 191 |
Conread position: | 137-526 |
Cow position: | chrX:2047663-2047262 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 253 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 42, 35 |
Conread position: | 137-526 |
Cow position: | chrX:9095220-9094817 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 262 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 42, 37 |
Conread position: | 137-527 |
Cow position: | chrX:7120072-7119662 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 259 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 42, 37 |
Conread position: | 137-527 |
Cow position: | chrX:7754484-7754076 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 258 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 42, 36 |
Conread position: | 137-527 |
Cow position: | chrX:41687191-41686788 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 267 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 104, 181 |
Conread position: | 138-410 |
Cow position: | chrX:29228014-29227730 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 193 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 117, 105 |
Conread position: | 138-501 |
Cow position: | chrX:23236468-23236095 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 243 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 103, 153 |
Conread position: | 138-519 |
Cow position: | chrX:7175324-7174941 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 258 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 178, 105 |
Conread position: | 139-522 |
Cow position: | chrX:14217549-14217933 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 264 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 100, 154 |
Conread position: | 139-529 |
Cow position: | chrX:26341625-26342015 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 250 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 106, 62 |
Conread position: | 140-529 |
Cow position: | chrX:387711-387306 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 265 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 100, 57 |
Conread position: | 141-532 |
Cow position: | chrX:30090461-30090850 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 257 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 38, 33 |
Conread position: | 146-527 |
Cow position: | chrX:31495308-31494906 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 261 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 33, 28 |
Conread position: | 147-527 |
Cow position: | chrX:34093259-34093657 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 251 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 32, 27 |
Conread position: | 148-410 |
Cow position: | chrX:4157503-4157773 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 179 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 104, 251 |
Conread position: | 162-519 |
Cow position: | chrX:164459-164102 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 236 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 167, 33 |
Conread position: | 167-357 |
Cow position: | chrX:23959532-23959345 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 162 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 51 |
Conread position: | 173-534 |
Cow position: | chrX:22126234-22126603 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 243 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 56, 14 |
Conread position: | 181-508 |
Cow position: | chrX:12999973-13000296 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 215 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 164, 75 |
Conread position: | 186-529 |
Cow position: | chrX:20512038-20512389 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 236 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 62, 33 |
Conread position: | 195-529 |
Cow position: | chrX:515028-514684 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 231 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 63, 41 |
Conread position: | 238-529 |
Cow position: | chrX:22076456-22076760 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 204 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 13, 169 |
Conread position: | 331-535 |
Cow position: | chrX:23959346-23959139 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 127 |
Show alignments to all cow chromosomes.