Cow genome map

Conread name: mO3-MI-P-O3-aav-c-06-1-UM.s1

Conread position: 2-396
Cow position: chr11:53855801-53855405 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 259
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 16

Conread position: 3-148
Cow position: chr11:41577681-41577832 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 3-169
Cow position: chr11:49099379-49099554 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 9

Conread position: 3-195
Cow position: chr11:7926033-7926214 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 15

Conread position: 3-222
Cow position: chr11:40133526-40133750 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 9

Conread position: 3-229
Cow position: chr11:52127716-52127950 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 30, 9

Conread position: 3-233
Cow position: chr11:29949062-29949302 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 15

Conread position: 3-259
Cow position: chr11:28394343-28394079 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 192
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 83, 17

Conread position: 3-274
Cow position: chr11:81576413-81576686 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 9

Conread position: 3-282
Cow position: chr11:4032212-4032491 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 9

Conread position: 3-282
Cow position: chr11:24045487-24045774 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 17

Conread position: 3-298
Cow position: chr11:37068970-37069278 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 9

Conread position: 3-301
Cow position: chr11:46142715-46143020 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 77, 9

Conread position: 3-326
Cow position: chr11:52297887-52298222 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 17

Conread position: 3-333
Cow position: chr11:40402509-40402836 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 15

Conread position: 3-338
Cow position: chr11:40772799-40773140 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-344
Cow position: chr11:42793663-42794017 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 15

Conread position: 3-344
Cow position: chr11:53772938-53772603 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 15

Conread position: 3-346
Cow position: chr11:8246458-8246110 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 30, 9

Conread position: 3-349
Cow position: chr11:43917708-43917349 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-351
Cow position: chr11:1625892-1626241 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 26, 15

Conread position: 3-351
Cow position: chr11:33601365-33601727 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-351
Cow position: chr11:47757710-47758075 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-351
Cow position: chr11:75256464-75256103 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-354
Cow position: chr11:67746682-67746323 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 14

Conread position: 3-363
Cow position: chr11:44870793-44870427 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 3-368
Cow position: chr11:38235496-38235873 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 14

Conread position: 3-372
Cow position: chr11:4734557-4734175 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-376
Cow position: chr11:48411802-48411412 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-380
Cow position: chr11:45155469-45155863 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 269
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 26, 9

Conread position: 3-383
Cow position: chr11:31833987-31834380 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-384
Cow position: chr11:7229634-7229240 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-384
Cow position: chr11:34297753-34297368 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr11:2567413-2567804 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 268
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 115, 15

Conread position: 3-385
Cow position: chr11:7152270-7151879 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr11:7719241-7719636 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-385
Cow position: chr11:30700768-30700373 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr11:36930260-36930651 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr11:40458452-40458054 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-385
Cow position: chr11:59368762-59369156 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 17

Conread position: 3-385
Cow position: chr11:65282284-65281898 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr11:77749322-77748945 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-385
Cow position: chr11:80591631-80591242 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-385
Cow position: chr11:85390588-85390971 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-387
Cow position: chr11:44893605-44893997 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-392
Cow position: chr11:69402947-69403349 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 3-394
Cow position: chr11:62574721-62575110 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 270
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 30, 17

Conread position: 3-395
Cow position: chr11:27724627-27725034 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-396
Cow position: chr11:3796488-3796103 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 276
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 33, 19

Conread position: 3-396
Cow position: chr11:25336411-25336007 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 3-396
Cow position: chr11:25565021-25564620 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-396
Cow position: chr11:30164836-30164439 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-396
Cow position: chr11:59872082-59871683 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 9

Conread position: 3-397
Cow position: chr11:18756107-18755711 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 253
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 15

Conread position: 3-398
Cow position: chr11:11592255-11591842 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 3-399
Cow position: chr11:2285987-2285577 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:5482172-5482582 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:5584173-5584570 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 9

Conread position: 3-399
Cow position: chr11:6343733-6343324 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:11315555-11315964 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:15047731-15047323 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 9

Conread position: 3-399
Cow position: chr11:15988571-15988152 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:18920324-18920722 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:19507605-19507194 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 282
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 15

Conread position: 3-399
Cow position: chr11:30057473-30057071 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 282
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 33, 15

Conread position: 3-399
Cow position: chr11:41093591-41093998 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-399
Cow position: chr11:41599419-41599824 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 15

Conread position: 3-399
Cow position: chr11:44106953-44106548 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-399
Cow position: chr11:49935474-49935884 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 3-399
Cow position: chr11:51034550-51034140 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:52846749-52846338 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:58136990-58136581 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:61397347-61397755 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 3-399
Cow position: chr11:63390208-63390615 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:67295733-67296143 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:67920068-67920472 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:68130663-68130275 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:70030693-70030285 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 3-399
Cow position: chr11:71332773-71332365 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr11:73798431-73798834 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 3-399
Cow position: chr11:75710979-75711389 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-401
Cow position: chr11:38504957-38505373 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-405
Cow position: chr11:14259692-14260099 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 9

Conread position: 3-405
Cow position: chr11:67347852-67348257 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 15

Conread position: 3-405
Cow position: chr11:75354477-75354061 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 15

Conread position: 3-406
Cow position: chr11:26482849-26482429 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-409
Cow position: chr11:21896430-21896841 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-409
Cow position: chr11:38832205-38832623 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-410
Cow position: chr11:4024084-4024496 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-410
Cow position: chr11:4266881-4267302 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:5273300-5273721 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:11991273-11990851 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:12316788-12317217 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:12353618-12354039 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:19099214-19099632 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 3-410
Cow position: chr11:29662789-29663197 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:31836458-31836043 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:32077509-32077929 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:35738070-35738489 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:41167420-41167841 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:43510701-43511122 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:44153809-44154225 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:44579960-44580380 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:46780796-46781215 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr11:58139964-58139558 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-410
Cow position: chr11:81068004-81067602 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:417199-417621 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:1667894-1667477 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 19

Conread position: 3-411
Cow position: chr11:3238576-3238153 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:7120675-7121111 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:8366834-8366412 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:10698472-10698894 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:10871551-10871973 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:12178362-12177940 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:13087393-13087815 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-411
Cow position: chr11:15495662-15495240 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:16547676-16548098 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:17549432-17549010 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:17854368-17853946 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:19060800-19061222 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:20285344-20285766 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:20730949-20731370 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 9

Conread position: 3-411
Cow position: chr11:22617672-22618094 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:24333719-24334141 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:25760016-25759605 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:26592503-26592925 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:27660512-27660086 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 15

Conread position: 3-411
Cow position: chr11:28125787-28125367 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:28226504-28226927 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:30255712-30255285 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:30777237-30776815 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:30929656-30929234 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:34638230-34638652 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:35541796-35542216 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:38574211-38574633 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:38599440-38599862 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-411
Cow position: chr11:41260655-41261076 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:41314569-41314148 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:43361465-43361867 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 15

Conread position: 3-411
Cow position: chr11:47972582-47973000 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-411
Cow position: chr11:54302811-54302389 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:56463636-56463214 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:62792168-62791747 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:63860370-63860791 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:65760333-65760754 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:66389741-66390155 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:67453927-67453507 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:72369325-72368905 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-411
Cow position: chr11:73137852-73137443 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:74990895-74990472 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr11:83001302-83000881 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-412
Cow position: chr11:10851388-10850960 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 3-414
Cow position: chr11:15836187-15835761 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 4-397
Cow position: chr11:8829515-8829902 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 14

Conread position: 4-399
Cow position: chr11:84967381-84966974 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 4-411
Cow position: chr11:39151869-39151450 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 14

Conread position: 4-411
Cow position: chr11:62009528-62009950 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 5-396
Cow position: chr11:28692710-28693103 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 268
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 29, 13

Conread position: 5-411
Cow position: chr11:77745935-77746354 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 6-396
Cow position: chr11:49236704-49237098 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 254
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 12

Conread position: 7-396
Cow position: chr11:66514379-66514766 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 242
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 53

Conread position: 7-399
Cow position: chr11:10094138-10093740 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 7-399
Cow position: chr11:80789118-80789527 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 11

Conread position: 7-410
Cow position: chr11:35241613-35242016 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 5

Conread position: 12-385
Cow position: chr11:3999246-3999610 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 258
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 97, 70

Conread position: 12-385
Cow position: chr11:32762717-32762331 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 88

Conread position: 12-410
Cow position: chr11:16229381-16229794 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 270

Conread position: 12-411
Cow position: chr11:1492605-1492996 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 273
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 97, 76

Conread position: 13-254
Cow position: chr11:46777037-46777282 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 60, 188

Conread position: 13-378
Cow position: chr11:34298662-34299025 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 246
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 69

Conread position: 16-405
Cow position: chr11:27938854-27938468 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 30, 161

Conread position: 17-396
Cow position: chr11:84532013-84532394 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 253
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 49, 14

Conread position: 19-411
Cow position: chr11:3496302-3495895 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 22-261
Cow position: chr11:43431342-43431590 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 99, 64

Conread position: 24-399
Cow position: chr11:24601251-24600854 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 252
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 7

Conread position: 25-385
Cow position: chr11:38069548-38069174 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 6

Conread position: 25-399
Cow position: chr11:30200449-30200829 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 6

Conread position: 25-399
Cow position: chr11:37279332-37279710 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 6

Conread position: 30-411
Cow position: chr11:21620386-21619992 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 33-399
Cow position: chr11:48167839-48168207 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 197

Conread position: 33-410
Cow position: chr11:58049690-58050072 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 286

Conread position: 33-411
Cow position: chr11:24493566-24493956 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 35-411
Cow position: chr11:50510433-50510820 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 34

Conread position: 38-411
Cow position: chr11:10959061-10958682 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 44-411
Cow position: chr11:57185589-57185217 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 160
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 245, 0

Conread position: 64-335
Cow position: chr11:38638118-38638393 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 188

Conread position: 66-385
Cow position: chr11:21853048-21853372 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 23

Conread position: 66-399
Cow position: chr11:67848763-67849116 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 66-400
Cow position: chr11:67863084-67863414 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 229
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 6, 80

Conread position: 66-409
Cow position: chr11:83285085-83284747 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 177

Conread position: 69-383
Cow position: chr11:15995697-15995375 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 70-405
Cow position: chr11:50950142-50949806 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 215, 17

Conread position: 70-410
Cow position: chr11:1504795-1505144 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 70-411
Cow position: chr11:4675434-4675763 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 19

Conread position: 74-396
Cow position: chr11:61426865-61426560 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 89, 24

Conread position: 75-351
Cow position: chr11:4206369-4206087 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 201
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 152

Conread position: 78-402
Cow position: chr11:33733395-33733715 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 43, 12

Conread position: 79-370
Cow position: chr11:46412826-46412528 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 42, 224

Conread position: 79-395
Cow position: chr11:21471813-21471496 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 64

Conread position: 79-395
Cow position: chr11:40487345-40487024 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 110

Conread position: 79-398
Cow position: chr11:2835451-2835129 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 130, 35

Conread position: 79-399
Cow position: chr11:9708338-9708012 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 12

Conread position: 79-399
Cow position: chr11:53428833-53429158 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 11

Conread position: 79-411
Cow position: chr11:74928986-74928655 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 11

Conread position: 80-328
Cow position: chr11:82345945-82346186 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 9, 0

Conread position: 82-411
Cow position: chr11:32875756-32876091 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 9

Conread position: 88-351
Cow position: chr11:32108948-32108688 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 33, 89

Conread position: 95-411
Cow position: chr11:17997759-17998081 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 95-411
Cow position: chr11:28631708-28631385 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 97-411
Cow position: chr11:54728636-54728316 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 12, 234

Conread position: 101-396
Cow position: chr11:22933458-22933755 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 116-411
Cow position: chr11:59583582-59583282 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 121-385
Cow position: chr11:87154863-87155124 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 164, 140

Conread position: 126-365
Cow position: chr11:42517481-42517238 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 152, 0

Conread position: 142-411
Cow position: chr11:26400607-26400336 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 188, 69

Conread position: 142-411
Cow position: chr11:59444420-59444694 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 147, 0

Conread position: 144-396
Cow position: chr11:59623470-59623727 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 139, 11

Conread position: 146-396
Cow position: chr11:52128332-52128076 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 190
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 146-411
Cow position: chr11:63652555-63652823 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 153, 170

Conread position: 165-385
Cow position: chr11:38793680-38793466 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 27

Conread position: 165-396
Cow position: chr11:15128883-15128643 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 118, 96

Conread position: 165-399
Cow position: chr11:52463392-52463146 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 73, 152

Conread position: 179-398
Cow position: chr11:81316791-81317011 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 104, 137

Conread position: 179-411
Cow position: chr11:29614481-29614244 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 110, 0

Conread position: 181-402
Cow position: chr11:31487311-31487089 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 118, 80

Conread position: 196-404
Cow position: chr11:67954057-67954261 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 45

Conread position: 203-399
Cow position: chr11:65852092-65852293 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 204-399
Cow position: chr11:41177980-41177783 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 82, 52

Conread position: 207-411
Cow position: chr11:44516118-44516317 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 11

Conread position: 210-411
Cow position: chr11:10043025-10043231 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 212-411
Cow position: chr11:64353266-64353470 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 77, 0

Conread position: 216-399
Cow position: chr11:32477760-32477948 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 69, 0

Conread position: 220-330
Cow position: chr11:42372829-42372718 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 225-411
Cow position: chr11:23896563-23896372 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 231-411
Cow position: chr11:4396759-4396938 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 54, 31

Conread position: 233-399
Cow position: chr11:8494537-8494366 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.