Cow genome map

Conread name: mO3-MI-P-O3-aav-c-06-1-UM.s1

Conread position: 1-410
Cow position: chr24:17566497-17566080 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 17

Conread position: 3-183
Cow position: chr24:19678064-19677878 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 78, 9

Conread position: 3-189
Cow position: chr24:12293342-12293147 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 9

Conread position: 3-218
Cow position: chr24:33239233-33239453 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 15

Conread position: 3-221
Cow position: chr24:35872575-35872799 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 9

Conread position: 3-225
Cow position: chr24:7782474-7782707 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 30, 9

Conread position: 3-229
Cow position: chr24:31370643-31370873 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 27, 9

Conread position: 3-236
Cow position: chr24:26795066-26794824 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 9

Conread position: 3-257
Cow position: chr24:144704-144967 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 9

Conread position: 3-263
Cow position: chr24:27345246-27345515 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 30, 9

Conread position: 3-282
Cow position: chr24:10035394-10035682 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 30, 9

Conread position: 3-282
Cow position: chr24:11081133-11081418 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 77, 9

Conread position: 3-282
Cow position: chr24:11940411-11940123 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 9

Conread position: 3-282
Cow position: chr24:12447141-12446856 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 77, 9

Conread position: 3-282
Cow position: chr24:15793368-15793655 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 33, 9

Conread position: 3-322
Cow position: chr24:18740719-18741048 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-325
Cow position: chr24:42944030-42944338 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 15

Conread position: 3-346
Cow position: chr24:39067218-39067575 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-347
Cow position: chr24:30870319-30870676 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-351
Cow position: chr24:30893231-30893575 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 30, 15

Conread position: 3-383
Cow position: chr24:40036305-40036697 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 3-384
Cow position: chr24:32823481-32823866 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 15

Conread position: 3-385
Cow position: chr24:5910469-5910062 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr24:9901021-9900626 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr24:17763966-17764344 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 258
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 17

Conread position: 3-385
Cow position: chr24:18266843-18267231 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr24:39500957-39501338 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 263
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 45, 15

Conread position: 3-385
Cow position: chr24:45087174-45086778 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 264

Conread position: 3-387
Cow position: chr24:28336414-28336804 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-390
Cow position: chr24:32361213-32361602 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 9

Conread position: 3-390
Cow position: chr24:36710488-36710093 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-396
Cow position: chr24:3794132-3793725 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-396
Cow position: chr24:5862704-5863110 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-396
Cow position: chr24:6415812-6415407 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-396
Cow position: chr24:12696474-12696879 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-396
Cow position: chr24:16474952-16474550 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 275
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 30, 15

Conread position: 3-396
Cow position: chr24:17309775-17310189 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 15

Conread position: 3-396
Cow position: chr24:36555943-36556336 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 15

Conread position: 3-399
Cow position: chr24:207350-207752 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 9

Conread position: 3-399
Cow position: chr24:6035530-6035941 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr24:12146939-12147347 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr24:13191810-13191403 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr24:13492140-13491736 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr24:15667103-15667507 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 19

Conread position: 3-399
Cow position: chr24:16056218-16056618 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-399
Cow position: chr24:20283562-20283970 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr24:23052237-23052648 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-399
Cow position: chr24:26388259-26388655 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr24:29180011-29179606 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-399
Cow position: chr24:31357235-31356841 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-399
Cow position: chr24:31382023-31381640 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-399
Cow position: chr24:32853862-32853450 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr24:33937578-33937165 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-399
Cow position: chr24:35067145-35067536 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr24:36027865-36028274 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr24:38296706-38296296 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr24:40552269-40551865 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-405
Cow position: chr24:10243912-10244314 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-409
Cow position: chr24:36308226-36307810 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr24:8607978-8607558 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 3-410
Cow position: chr24:12090625-12090209 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-410
Cow position: chr24:12198706-12199137 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 9

Conread position: 3-410
Cow position: chr24:12332057-12332478 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr24:16558640-16559050 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-410
Cow position: chr24:18222829-18223251 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr24:22975459-22975037 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 251

Conread position: 3-410
Cow position: chr24:29190933-29190517 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr24:31302333-31301934 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr24:36779910-36779500 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr24:40466763-40467184 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr24:41006121-41005707 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 9

Conread position: 3-411
Cow position: chr24:1841221-1841644 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:3163120-3162698 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:3851245-3850823 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:5929428-5929007 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:5990538-5990955 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-411
Cow position: chr24:6020429-6020850 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 9

Conread position: 3-411
Cow position: chr24:6325722-6326143 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:6413128-6412706 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:7596913-7597331 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:11104502-11104924 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:11207957-11208379 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:13235915-13235497 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:14249933-14250355 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:14352996-14352580 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 9

Conread position: 3-411
Cow position: chr24:15296765-15296343 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:16080835-16081259 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:17161328-17161750 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-411
Cow position: chr24:17188623-17189046 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:18113105-18112683 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:20604398-20603977 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 9

Conread position: 3-411
Cow position: chr24:22047423-22047839 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 9

Conread position: 3-411
Cow position: chr24:22795208-22794787 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-411
Cow position: chr24:22954212-22953790 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:25372752-25372331 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:29084014-29084437 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:30681483-30681894 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:31067395-31067817 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:32608961-32608539 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:35823555-35823977 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:36036181-36036598 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 3-411
Cow position: chr24:40272492-40272075 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr24:40428044-40428466 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 4-183
Cow position: chr24:13117288-13117102 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 8

Conread position: 5-380
Cow position: chr24:6443084-6442698 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 5-411
Cow position: chr24:27148760-27148333 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 6-385
Cow position: chr24:9071199-9071586 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 6

Conread position: 6-411
Cow position: chr24:14745991-14745592 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 12

Conread position: 7-398
Cow position: chr24:17365338-17365732 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 13-405
Cow position: chr24:17105240-17105643 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 18

Conread position: 13-410
Cow position: chr24:38588423-38588011 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 93

Conread position: 16-390
Cow position: chr24:16267081-16266707 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 31

Conread position: 16-396
Cow position: chr24:14336496-14336110 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 254
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 20, 165

Conread position: 16-399
Cow position: chr24:6067705-6068098 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 206

Conread position: 19-411
Cow position: chr24:14194214-14194620 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 19-411
Cow position: chr24:40518978-40519374 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 132

Conread position: 25-263
Cow position: chr24:27762870-27762624 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 60, 193

Conread position: 25-395
Cow position: chr24:28601417-28601780 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 6

Conread position: 25-411
Cow position: chr24:14146543-14146937 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 6

Conread position: 33-396
Cow position: chr24:33122536-33122170 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 40

Conread position: 34-396
Cow position: chr24:19687971-19688336 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 196

Conread position: 64-396
Cow position: chr24:9088536-9088864 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 120

Conread position: 64-411
Cow position: chr24:20367950-20367594 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 33

Conread position: 65-399
Cow position: chr24:6524583-6524237 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 145

Conread position: 69-411
Cow position: chr24:36726729-36726384 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 150

Conread position: 71-412
Cow position: chr24:8431938-8431599 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 17

Conread position: 82-376
Cow position: chr24:2948122-2947824 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 82-399
Cow position: chr24:7959953-7960276 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 84-385
Cow position: chr24:36722005-36721699 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 16

Conread position: 109-411
Cow position: chr24:25439741-25439428 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 13, 63

Conread position: 114-411
Cow position: chr24:5279742-5279440 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 114-411
Cow position: chr24:13496814-13496512 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 114-411
Cow position: chr24:25698468-25698173 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 113

Conread position: 117-385
Cow position: chr24:14515929-14516199 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 16

Conread position: 117-399
Cow position: chr24:45003943-45003664 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 57

Conread position: 146-399
Cow position: chr24:14376145-14376403 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 79, 34

Conread position: 165-396
Cow position: chr24:6544055-6543828 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 212, 128

Conread position: 179-385
Cow position: chr24:25285223-25285014 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 143, 0

Conread position: 221-396
Cow position: chr24:6079849-6079668 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 224-398
Cow position: chr24:35568408-35568238 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 54

Conread position: 233-396
Cow position: chr24:29131020-29131186 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 35

Conread position: 233-411
Cow position: chr24:9546583-9546400 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 247-371
Cow position: chr24:19467181-19467310 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Show alignments to all cow chromosomes.