Cow genome map
Conread name: | mO3-MI-P-O3-aav-c-06-1-UM.s1 |
Conread position: | 3-184 |
Cow position: | chr27:8187390-8187204 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 133 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-200 |
Cow position: | chr27:9989323-9989527 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 145 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-248 |
Cow position: | chr27:2936380-2936130 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 178 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 28, 17 |
Conread position: | 3-259 |
Cow position: | chr27:29811859-29811596 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 194 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 83, 9 |
Conread position: | 3-263 |
Cow position: | chr27:11490178-11489910 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 189 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 30, 15 |
Conread position: | 3-269 |
Cow position: | chr27:19300008-19300284 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 198 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-322 |
Cow position: | chr27:17476664-17476978 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 228 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 106, 9 |
Conread position: | 3-350 |
Cow position: | chr27:13182732-13183074 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 15 |
Conread position: | 3-350 |
Cow position: | chr27:24055240-24054906 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 262 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-385 |
Cow position: | chr27:15033334-15033728 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 9 |
Conread position: | 3-385 |
Cow position: | chr27:24295702-24296106 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-385 |
Cow position: | chr27:25800653-25801042 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-390 |
Cow position: | chr27:12282242-12281848 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 262 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 92, 15 |
Conread position: | 3-390 |
Cow position: | chr27:15866749-15867137 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 17 |
Conread position: | 3-390 |
Cow position: | chr27:21350405-21350008 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 15 |
Conread position: | 3-396 |
Cow position: | chr27:2682080-2681674 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-396 |
Cow position: | chr27:9333225-9332827 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-396 |
Cow position: | chr27:9970729-9970322 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-396 |
Cow position: | chr27:11481489-11481083 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-396 |
Cow position: | chr27:27557356-27556957 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 17 |
Conread position: | 3-396 |
Cow position: | chr27:30036436-30036020 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 3-397 |
Cow position: | chr27:2557436-2557843 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 9 |
Conread position: | 3-398 |
Cow position: | chr27:344372-344776 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 17 |
Conread position: | 3-399 |
Cow position: | chr27:1189214-1188814 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-399 |
Cow position: | chr27:11434720-11434323 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 15 |
Conread position: | 3-399 |
Cow position: | chr27:15272516-15272920 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 15 |
Conread position: | 3-399 |
Cow position: | chr27:15406177-15405776 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 15 |
Conread position: | 3-399 |
Cow position: | chr27:22797101-22797509 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-405 |
Cow position: | chr27:21452004-21451586 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 15 |
Conread position: | 3-405 |
Cow position: | chr27:31268772-31268359 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 266 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 30, 15 |
Conread position: | 3-410 |
Cow position: | chr27:4331181-4331603 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-410 |
Cow position: | chr27:4982918-4982509 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 9 |
Conread position: | 3-410 |
Cow position: | chr27:8427416-8426994 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-410 |
Cow position: | chr27:8973000-8972581 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 9 |
Conread position: | 3-410 |
Cow position: | chr27:13901681-13901261 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 9 |
Conread position: | 3-410 |
Cow position: | chr27:15633785-15634205 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 17 |
Conread position: | 3-410 |
Cow position: | chr27:19523152-19523571 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-410 |
Cow position: | chr27:19931999-19932429 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-410 |
Cow position: | chr27:20810974-20810558 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-410 |
Cow position: | chr27:26785370-26784959 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 15 |
Conread position: | 3-410 |
Cow position: | chr27:27291951-27291526 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-410 |
Cow position: | chr27:27728928-27729350 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 225 |
Conread position: | 3-411 |
Cow position: | chr27:1081618-1082026 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 9 |
Conread position: | 3-411 |
Cow position: | chr27:1521232-1520816 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-411 |
Cow position: | chr27:2001402-2000982 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-411 |
Cow position: | chr27:3653142-3653564 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-411 |
Cow position: | chr27:5983473-5983894 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 9 |
Conread position: | 3-411 |
Cow position: | chr27:10579501-10579083 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-411 |
Cow position: | chr27:12006706-12006284 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-411 |
Cow position: | chr27:13353863-13353442 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-411 |
Cow position: | chr27:16030839-16031261 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-411 |
Cow position: | chr27:29035824-29036244 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-411 |
Cow position: | chr27:30306708-30307133 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 9 |
Conread position: | 3-413 |
Cow position: | chr27:10383988-10383582 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 289 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 30, 8 |
Conread position: | 4-385 |
Cow position: | chr27:8201493-8201101 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 8 |
Conread position: | 4-410 |
Cow position: | chr27:15349197-15348799 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 87 |
Conread position: | 5-256 |
Cow position: | chr27:13409551-13409288 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 197 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 30, 7 |
Conread position: | 5-385 |
Cow position: | chr27:26330488-26330095 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 7 |
Conread position: | 5-399 |
Cow position: | chr27:165364-165771 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 7 |
Conread position: | 5-410 |
Cow position: | chr27:3231982-3232397 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 7 |
Conread position: | 7-362 |
Cow position: | chr27:10306657-10306304 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 15 |
Conread position: | 9-399 |
Cow position: | chr27:27930755-27930356 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 195 |
Conread position: | 12-411 |
Cow position: | chr27:14297757-14297343 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 15-411 |
Cow position: | chr27:2332050-2331638 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 402 |
Conread position: | 21-399 |
Cow position: | chr27:20765270-20764898 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 267 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 25, 10 |
Conread position: | 25-201 |
Cow position: | chr27:23454508-23454331 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 132 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 66, 6 |
Conread position: | 38-378 |
Cow position: | chr27:25799774-25799427 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 62 |
Conread position: | 45-412 |
Cow position: | chr27:1536684-1536305 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 280 |
Conread position: | 46-410 |
Cow position: | chr27:19423866-19424240 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 14 |
Conread position: | 49-399 |
Cow position: | chr27:1502020-1501673 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 240 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 35, 151 |
Conread position: | 66-385 |
Cow position: | chr27:5914415-5914096 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 222 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 55, 24 |
Conread position: | 70-379 |
Cow position: | chr27:14380788-14380473 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 119 |
Conread position: | 78-405 |
Cow position: | chr27:1141174-1140839 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 217 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 43, 11 |
Conread position: | 79-399 |
Cow position: | chr27:21392485-21392160 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 150 |
Conread position: | 86-411 |
Cow position: | chr27:22647165-22647496 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 5 |
Conread position: | 99-411 |
Cow position: | chr27:13309096-13308780 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 9 |
Conread position: | 106-400 |
Cow position: | chr27:27045622-27045326 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 88 |
Conread position: | 109-411 |
Cow position: | chr27:15870577-15870874 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 86 |
Conread position: | 123-397 |
Cow position: | chr27:27279143-27278861 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 0 |
Conread position: | 125-396 |
Cow position: | chr27:15697770-15697502 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 94 |
Conread position: | 146-380 |
Cow position: | chr27:25971194-25971433 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 174 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 139, 87 |
Conread position: | 166-399 |
Cow position: | chr27:25885208-25884975 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 174 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 117, 37 |
Conread position: | 169-404 |
Cow position: | chr27:8429388-8429146 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 172 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 54, 190 |
Conread position: | 180-411 |
Cow position: | chr27:20001777-20001552 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 168 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 109, 135 |
Conread position: | 193-378 |
Cow position: | chr27:9989843-9990033 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 142 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 216-411 |
Cow position: | chr27:8262105-8261907 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 143 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 69, 29 |
Conread position: | 216-411 |
Cow position: | chr27:15544351-15544151 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 148 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 243-410 |
Cow position: | chr27:12750334-12750162 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 123 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.