Cow genome map

Conread name: mO3-MI-P-O3-aav-c-06-1-UM.s1

Conread position: 3-190
Cow position: chr6:48567958-48568154 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 31, 15

Conread position: 3-199
Cow position: chr6:39997552-39997757 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 17

Conread position: 3-199
Cow position: chr6:47977464-47977260 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 9

Conread position: 3-201
Cow position: chr6:4389245-4389039 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 9

Conread position: 3-205
Cow position: chr6:43393429-43393223 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 9

Conread position: 3-208
Cow position: chr6:55041638-55041848 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 30, 9

Conread position: 3-226
Cow position: chr6:32271677-32271905 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 9

Conread position: 3-229
Cow position: chr6:41410134-41409901 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 9

Conread position: 3-237
Cow position: chr6:47383118-47382885 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 9

Conread position: 3-248
Cow position: chr6:38872995-38873249 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 9

Conread position: 3-260
Cow position: chr6:55170006-55169751 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 29, 9

Conread position: 3-261
Cow position: chr6:1887265-1887530 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 79, 15

Conread position: 3-266
Cow position: chr6:8535266-8535533 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 9

Conread position: 3-281
Cow position: chr6:39897530-39897817 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 30, 9

Conread position: 3-282
Cow position: chr6:1245388-1245676 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-282
Cow position: chr6:48872794-48873079 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-287
Cow position: chr6:19059805-19059518 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-312
Cow position: chr6:57329811-57329492 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 30, 17

Conread position: 3-327
Cow position: chr6:33921868-33922205 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 206
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 83, 9

Conread position: 3-333
Cow position: chr6:11389081-11389421 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-336
Cow position: chr6:66234872-66234531 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 83, 9

Conread position: 3-347
Cow position: chr6:20581246-20581600 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 9

Conread position: 3-351
Cow position: chr6:7449028-7448667 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-351
Cow position: chr6:28136271-28135924 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-362
Cow position: chr6:55361262-55361634 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-367
Cow position: chr6:7216324-7215951 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-367
Cow position: chr6:51674299-51673930 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-370
Cow position: chr6:17344732-17344353 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-370
Cow position: chr6:46225432-46225809 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-378
Cow position: chr6:51877288-51876910 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-383
Cow position: chr6:727110-727486 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 17

Conread position: 3-385
Cow position: chr6:3484886-3485281 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr6:3885972-3886367 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr6:6568701-6569093 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-385
Cow position: chr6:11288932-11289328 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr6:28102340-28102728 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-385
Cow position: chr6:32420473-32420088 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 20

Conread position: 3-385
Cow position: chr6:35416442-35416834 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-385
Cow position: chr6:35873203-35873591 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 9

Conread position: 3-385
Cow position: chr6:40251267-40251659 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr6:45976032-45975637 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr6:50571724-50571329 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chr6:56926266-56925871 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-385
Cow position: chr6:60332878-60332481 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 3-385
Cow position: chr6:65909858-65909462 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 273
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 30, 9

Conread position: 3-389
Cow position: chr6:11638674-11639073 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-389
Cow position: chr6:46292946-46293309 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 266
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 9

Conread position: 3-395
Cow position: chr6:42267250-42266865 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-395
Cow position: chr6:50637789-50637409 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 117, 19

Conread position: 3-396
Cow position: chr6:479079-478674 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-396
Cow position: chr6:11869402-11869808 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-396
Cow position: chr6:13591845-13591440 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 274
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 9

Conread position: 3-396
Cow position: chr6:26324667-26325073 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-396
Cow position: chr6:29484507-29484108 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 3-396
Cow position: chr6:35601210-35600805 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-396
Cow position: chr6:46283572-46283969 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 15

Conread position: 3-398
Cow position: chr6:43187642-43187232 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 9

Conread position: 3-399
Cow position: chr6:126602-127009 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:451730-452140 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-399
Cow position: chr6:706531-706121 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:1402031-1402434 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:1406619-1407022 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:2089802-2089401 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:3271950-3272358 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:8753922-8754331 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:10598518-10598126 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 9

Conread position: 3-399
Cow position: chr6:11721683-11722083 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 9

Conread position: 3-399
Cow position: chr6:17121922-17121509 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:20451492-20451083 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-399
Cow position: chr6:21588515-21588107 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 15

Conread position: 3-399
Cow position: chr6:28065523-28065114 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:28172446-28172034 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 285
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:33301201-33300788 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 20

Conread position: 3-399
Cow position: chr6:39912855-39912447 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-399
Cow position: chr6:41232015-41231611 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:43779223-43778829 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:47539910-47539502 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 293
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 30, 15

Conread position: 3-399
Cow position: chr6:50120400-50120803 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-399
Cow position: chr6:51150475-51150065 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:51718089-51717678 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chr6:53811107-53810713 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 15

Conread position: 3-399
Cow position: chr6:55239223-55238815 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-399
Cow position: chr6:59596787-59596366 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 3-399
Cow position: chr6:60876828-60876421 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-400
Cow position: chr6:33896118-33896518 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 15

Conread position: 3-400
Cow position: chr6:55593603-55593192 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-405
Cow position: chr6:2875501-2875914 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-405
Cow position: chr6:53672875-53672453 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 308

Conread position: 3-406
Cow position: chr6:48327741-48327326 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 260
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 15

Conread position: 3-409
Cow position: chr6:12927101-12926686 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr6:917587-917155 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr6:2186249-2186670 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-410
Cow position: chr6:6182194-6182596 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr6:9737731-9738142 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-410
Cow position: chr6:15137640-15138061 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr6:15275707-15276128 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 3-410
Cow position: chr6:17049910-17049485 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr6:21832129-21832548 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 19

Conread position: 3-410
Cow position: chr6:24242819-24242401 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 17

Conread position: 3-410
Cow position: chr6:25374575-25374996 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr6:25790184-25790587 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 284
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr6:27475949-27475523 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-410
Cow position: chr6:33466490-33466070 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr6:34494205-34493787 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr6:34503991-34504409 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr6:40863503-40863917 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 274
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 77, 9

Conread position: 3-410
Cow position: chr6:44017295-44017716 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr6:46633644-46633231 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-410
Cow position: chr6:51733614-51733194 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chr6:64719848-64719430 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:327830-328252 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:889088-888668 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:1797158-1796738 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-411
Cow position: chr6:6119472-6119876 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 15

Conread position: 3-411
Cow position: chr6:7467118-7467539 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:10044739-10044326 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:11020191-11019768 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:11401853-11401431 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:13307865-13308286 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-411
Cow position: chr6:14851220-14851635 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:14928980-14928570 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-411
Cow position: chr6:14950127-14950541 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-411
Cow position: chr6:16410587-16410169 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 15

Conread position: 3-411
Cow position: chr6:16418158-16418571 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:16645416-16645007 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-411
Cow position: chr6:17111633-17112054 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:17387056-17386634 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:18803526-18803947 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:19103375-19103797 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:19712712-19713123 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:19719100-19718696 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:21163836-21163414 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:21712239-21711817 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:21856842-21857254 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:22043476-22043897 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 69

Conread position: 3-411
Cow position: chr6:22737173-22737595 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:23568060-23568482 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:23879526-23879945 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:26771589-26772010 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:27094054-27094475 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:27173374-27172940 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:28000863-28001280 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:28160942-28160520 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:28184788-28185208 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:31912642-31913064 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:31941400-31940978 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:33808901-33809323 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:37388099-37387689 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:40278584-40278170 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:43087082-43087485 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 9

Conread position: 3-411
Cow position: chr6:45479555-45479977 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:46948348-46947930 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:53542950-53543372 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:55538738-55539160 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:56451573-56451984 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:57521708-57521286 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:60379696-60379274 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:62665308-62664886 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:63177576-63177154 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chr6:65819049-65819469 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-412
Cow position: chr6:12387929-12388345 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-413
Cow position: chr6:55903622-55903198 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 4-385
Cow position: chr6:44098214-44097845 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 266
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 33, 8

Conread position: 4-399
Cow position: chr6:32287086-32286677 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 4-410
Cow position: chr6:8205719-8205300 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 4-410
Cow position: chr6:16593480-16593072 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 16

Conread position: 4-410
Cow position: chr6:47039679-47040097 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 5-395
Cow position: chr6:6278315-6277909 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 268
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 13

Conread position: 5-398
Cow position: chr6:1834526-1834117 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 5-398
Cow position: chr6:36531806-36531395 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 5-399
Cow position: chr6:40813892-40813488 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 5-411
Cow position: chr6:1274324-1274734 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 5-411
Cow position: chr6:7137811-7138229 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 5-411
Cow position: chr6:11453336-11453757 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 5-411
Cow position: chr6:46763875-46764291 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 5-411
Cow position: chr6:57857301-57856880 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 6-405
Cow position: chr6:182023-182423 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 6

Conread position: 6-411
Cow position: chr6:43797368-43797790 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 6

Conread position: 7-398
Cow position: chr6:65847844-65848245 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 268
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 26, 5

Conread position: 7-411
Cow position: chr6:67553761-67553343 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 5

Conread position: 12-376
Cow position: chr6:1498726-1498345 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 0

Conread position: 12-410
Cow position: chr6:39331008-39331419 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 12-411
Cow position: chr6:16049768-16050181 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 12-411
Cow position: chr6:44146424-44146836 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 16-246
Cow position: chr6:27869725-27869487 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 16-399
Cow position: chr6:58031297-58030900 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 16-411
Cow position: chr6:3152736-3152329 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 244

Conread position: 16-411
Cow position: chr6:12997941-12997532 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 239

Conread position: 17-395
Cow position: chr6:6459629-6459241 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 262
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 16, 138

Conread position: 17-411
Cow position: chr6:2366761-2367150 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 271
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 102, 19

Conread position: 18-396
Cow position: chr6:33984315-33983942 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 250
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 10, 75

Conread position: 20-399
Cow position: chr6:11193068-11193463 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 269
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 62, 11

Conread position: 25-282
Cow position: chr6:52697099-52696829 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 13, 0

Conread position: 25-385
Cow position: chr6:1537213-1536843 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 6

Conread position: 33-394
Cow position: chr6:18962869-18963214 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 244, 48

Conread position: 33-399
Cow position: chr6:2618064-2618443 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 108

Conread position: 33-399
Cow position: chr6:47381185-47380789 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 269
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 52, 0

Conread position: 35-385
Cow position: chr6:508022-508384 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 37-411
Cow position: chr6:10612322-10611938 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 146

Conread position: 41-396
Cow position: chr6:16220668-16221002 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 48

Conread position: 44-378
Cow position: chr6:4903511-4903851 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 195

Conread position: 64-411
Cow position: chr6:6034331-6034686 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 5

Conread position: 66-410
Cow position: chr6:34843247-34843601 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 69-380
Cow position: chr6:55474768-55474449 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 292

Conread position: 69-399
Cow position: chr6:47149506-47149847 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 69-400
Cow position: chr6:6471478-6471811 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 20

Conread position: 70-385
Cow position: chr6:9839673-9839997 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 292

Conread position: 70-386
Cow position: chr6:16675135-16674815 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 216
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 62

Conread position: 70-399
Cow position: chr6:1263616-1263287 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 160

Conread position: 74-353
Cow position: chr6:9322455-9322173 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 51, 27

Conread position: 78-411
Cow position: chr6:67448475-67448815 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 79-353
Cow position: chr6:27887362-27887082 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 120

Conread position: 79-361
Cow position: chr6:47171513-47171230 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 200
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 10, 189

Conread position: 79-385
Cow position: chr6:16703295-16703605 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 97

Conread position: 79-398
Cow position: chr6:45793180-45792858 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 218
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 204, 47

Conread position: 79-405
Cow position: chr6:48947209-48947538 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 68

Conread position: 79-411
Cow position: chr6:16766395-16766729 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 9

Conread position: 79-411
Cow position: chr6:50114123-50113795 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 35

Conread position: 80-390
Cow position: chr6:52557205-52557510 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 203, 24

Conread position: 82-395
Cow position: chr6:18987575-18987266 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 31

Conread position: 82-411
Cow position: chr6:6557407-6557072 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 83-396
Cow position: chr6:16274573-16274253 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 208
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 18

Conread position: 85-385
Cow position: chr6:41192766-41192464 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 214, 32

Conread position: 90-395
Cow position: chr6:17556234-17556544 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 225

Conread position: 91-411
Cow position: chr6:67173993-67173666 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 11

Conread position: 92-399
Cow position: chr6:13314593-13314906 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 29, 157

Conread position: 92-411
Cow position: chr6:61829666-61829340 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 95-333
Cow position: chr6:1109442-1109200 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 95-411
Cow position: chr6:43621165-43620842 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 97-375
Cow position: chr6:33508678-33508398 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 24, 65

Conread position: 100-396
Cow position: chr6:7112509-7112809 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 13, 184

Conread position: 101-390
Cow position: chr6:44510515-44510224 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 94

Conread position: 106-412
Cow position: chr6:62000923-62001231 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 191
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 214, 0

Conread position: 109-409
Cow position: chr6:14263839-14264141 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 95

Conread position: 114-385
Cow position: chr6:30316532-30316803 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 157, 78

Conread position: 114-385
Cow position: chr6:49761876-49761608 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 18

Conread position: 114-399
Cow position: chr6:36230113-36230403 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 114-411
Cow position: chr6:52065708-52066010 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 115-396
Cow position: chr6:6595832-6595549 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 46

Conread position: 117-399
Cow position: chr6:12514900-12514616 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 109

Conread position: 118-411
Cow position: chr6:27939442-27939145 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 42

Conread position: 130-379
Cow position: chr6:53935241-53935489 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 167, 115

Conread position: 132-349
Cow position: chr6:19335986-19336204 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 92, 34

Conread position: 136-385
Cow position: chr6:30269511-30269765 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 137-385
Cow position: chr6:51868377-51868127 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 40, 59

Conread position: 139-411
Cow position: chr6:25179797-25180071 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 196, 111

Conread position: 143-394
Cow position: chr6:50485400-50485656 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 156, 0

Conread position: 143-398
Cow position: chr6:58605910-58605653 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 142, 32

Conread position: 143-410
Cow position: chr6:34405686-34405413 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 154-385
Cow position: chr6:12099877-12099643 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 181, 92

Conread position: 155-411
Cow position: chr6:43038699-43038956 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 134, 177

Conread position: 156-367
Cow position: chr6:57383788-57383572 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 7, 0

Conread position: 157-411
Cow position: chr6:45723777-45724034 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 173, 98

Conread position: 160-411
Cow position: chr6:68030546-68030290 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 129, 0

Conread position: 162-396
Cow position: chr6:41531958-41531717 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 109

Conread position: 162-411
Cow position: chr6:27151076-27151330 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 127, 0

Conread position: 163-410
Cow position: chr6:25357503-25357749 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 122, 93

Conread position: 170-411
Cow position: chr6:11168863-11168618 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 108, 41

Conread position: 179-411
Cow position: chr6:1507162-1507399 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 110, 0

Conread position: 179-411
Cow position: chr6:49963604-49963842 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 110, 0

Conread position: 179-411
Cow position: chr6:66188452-66188689 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 110, 0

Conread position: 181-411
Cow position: chr6:12629242-12629013 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 104, 147

Conread position: 182-399
Cow position: chr6:58016694-58016472 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 103, 0

Conread position: 193-411
Cow position: chr6:33489720-33489943 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 96, 0

Conread position: 210-411
Cow position: chr6:2453163-2452957 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 79, 0

Conread position: 210-411
Cow position: chr6:28399456-28399661 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 120, 0

Conread position: 212-411
Cow position: chr6:9587850-9587646 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 77, 0

Conread position: 220-396
Cow position: chr6:65892566-65892743 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 35

Conread position: 221-410
Cow position: chr6:41408710-41408517 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 68

Conread position: 221-411
Cow position: chr6:43048890-43049084 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 68, 10

Conread position: 224-411
Cow position: chr6:20350786-20350978 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 224-411
Cow position: chr6:57228895-57228704 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 234-411
Cow position: chr6:67211301-67211476 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 100, 33

Conread position: 238-410
Cow position: chr6:38873372-38873549 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 238-410
Cow position: chr6:57182103-57181930 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 95

Conread position: 241-399
Cow position: chr6:65930544-65930381 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 241-411
Cow position: chr6:28488292-28488467 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 242-411
Cow position: chr6:50113336-50113163 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 8

Show alignments to all cow chromosomes.