Cow genome map

Conread name: mO3-MI-P-O3-aav-c-06-1-UM.s1

Conread position: 1-385
Cow position: chrX:5353929-5354325 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 225

Conread position: 1-396
Cow position: chrX:30159623-30160026 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 11

Conread position: 3-178
Cow position: chrX:40827374-40827553 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 15

Conread position: 3-200
Cow position: chrX:39387059-39387266 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 30, 9

Conread position: 3-206
Cow position: chrX:30816899-30817111 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 9

Conread position: 3-208
Cow position: chrX:30143914-30144128 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 9

Conread position: 3-220
Cow position: chrX:30139414-30139640 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 9

Conread position: 3-222
Cow position: chrX:7444277-7444048 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 9

Conread position: 3-222
Cow position: chrX:30825018-30824790 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 30, 9

Conread position: 3-229
Cow position: chrX:2274287-2274055 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 77, 9

Conread position: 3-229
Cow position: chrX:2932350-2932583 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 30, 9

Conread position: 3-246
Cow position: chrX:20032461-20032713 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 9

Conread position: 3-253
Cow position: chrX:40580793-40581052 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 30, 9

Conread position: 3-256
Cow position: chrX:26974280-26974018 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 9

Conread position: 3-258
Cow position: chrX:2324077-2323813 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 30, 15

Conread position: 3-263
Cow position: chrX:8529910-8529641 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 30, 9

Conread position: 3-263
Cow position: chrX:31372832-31372563 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 9

Conread position: 3-265
Cow position: chrX:45903549-45903277 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 197
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 14, 259

Conread position: 3-282
Cow position: chrX:865766-865478 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 9

Conread position: 3-282
Cow position: chrX:11855539-11855247 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-282
Cow position: chrX:11950119-11950404 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 9

Conread position: 3-282
Cow position: chrX:18898279-18898567 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-282
Cow position: chrX:36479265-36479553 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 30, 9

Conread position: 3-282
Cow position: chrX:45236836-45236548 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 30, 9

Conread position: 3-312
Cow position: chrX:11566284-11565965 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-313
Cow position: chrX:5123989-5124309 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-326
Cow position: chrX:40384416-40384093 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 222
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 9

Conread position: 3-326
Cow position: chrX:40601489-40601166 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 222
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 9

Conread position: 3-328
Cow position: chrX:23415326-23415660 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 3-333
Cow position: chrX:28156905-28156570 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 19

Conread position: 3-335
Cow position: chrX:6766373-6766706 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 17

Conread position: 3-346
Cow position: chrX:21063841-21063489 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-346
Cow position: chrX:44874162-44874486 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 252, 17

Conread position: 3-349
Cow position: chrX:39558996-39559342 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 30, 15

Conread position: 3-351
Cow position: chrX:11073838-11074174 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 31

Conread position: 3-351
Cow position: chrX:21255145-21254788 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-351
Cow position: chrX:26447449-26447101 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 30, 9

Conread position: 3-362
Cow position: chrX:41879560-41879921 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 30, 17

Conread position: 3-364
Cow position: chrX:44054176-44053812 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 265
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 15

Conread position: 3-377
Cow position: chrX:28866647-28867032 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 15

Conread position: 3-380
Cow position: chrX:39730769-39731157 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-384
Cow position: chrX:1056018-1056411 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-384
Cow position: chrX:18455412-18455794 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 3-385
Cow position: chrX:4905620-4906012 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 3-385
Cow position: chrX:9898971-9899361 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:13206322-13205930 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:13405920-13406311 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:21415237-21414842 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:22538663-22539058 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:24588366-24588759 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:27095489-27095112 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 3-385
Cow position: chrX:27318601-27318206 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:27977461-27977857 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:27983000-27983376 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:29849259-29849648 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:30060258-30059862 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:30163868-30164261 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:30681134-30681524 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 269
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 43, 15

Conread position: 3-385
Cow position: chrX:38151058-38150664 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:41156681-41156287 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-385
Cow position: chrX:44193070-44193461 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-386
Cow position: chrX:33584058-33583667 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 261
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 14

Conread position: 3-389
Cow position: chrX:2486260-2486661 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 9

Conread position: 3-389
Cow position: chrX:37832102-37832477 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 264
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 15

Conread position: 3-390
Cow position: chrX:2300250-2299858 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 270
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 30, 15

Conread position: 3-390
Cow position: chrX:22811260-22810859 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-391
Cow position: chrX:36692204-36691807 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 15

Conread position: 3-394
Cow position: chrX:20953903-20953497 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-395
Cow position: chrX:5280483-5280887 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-395
Cow position: chrX:5320348-5320750 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-395
Cow position: chrX:5332067-5332467 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 9

Conread position: 3-395
Cow position: chrX:5334449-5334849 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 9

Conread position: 3-395
Cow position: chrX:19399148-19398741 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-396
Cow position: chrX:2382837-2382429 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-396
Cow position: chrX:11990781-11991187 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 274
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 15

Conread position: 3-396
Cow position: chrX:16526160-16525754 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-396
Cow position: chrX:17663549-17663951 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 3-396
Cow position: chrX:18244352-18243956 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 254

Conread position: 3-396
Cow position: chrX:30165301-30165699 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 3-396
Cow position: chrX:35609358-35608957 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-396
Cow position: chrX:35937711-35938102 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 3-397
Cow position: chrX:14049824-14050230 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-398
Cow position: chrX:28879236-28879620 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:323285-322872 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:3417767-3418176 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:5365229-5365637 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 274
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 65, 9

Conread position: 3-399
Cow position: chrX:9011697-9011291 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:10445045-10445455 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:10866497-10866896 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 15

Conread position: 3-399
Cow position: chrX:11461626-11462033 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:12145472-12145059 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:14458797-14459220 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:16035143-16035548 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 15

Conread position: 3-399
Cow position: chrX:16325159-16325570 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-399
Cow position: chrX:16703041-16702631 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:16711326-16710916 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:18222783-18222373 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:18656435-18656845 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:19609046-19608636 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:23986620-23986210 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:24280274-24279877 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 9

Conread position: 3-399
Cow position: chrX:24292309-24292703 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 9

Conread position: 3-399
Cow position: chrX:27616173-27615774 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-399
Cow position: chrX:29700583-29700981 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 3-399
Cow position: chrX:29879910-29880318 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-399
Cow position: chrX:30180557-30180964 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-399
Cow position: chrX:32144898-32145295 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-399
Cow position: chrX:33763508-33763105 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 3-399
Cow position: chrX:39556424-39556827 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-399
Cow position: chrX:40070240-40070641 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-399
Cow position: chrX:41847164-41847568 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 15

Conread position: 3-402
Cow position: chrX:7572751-7572344 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 9

Conread position: 3-406
Cow position: chrX:17054939-17054521 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-409
Cow position: chrX:14781976-14782395 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-409
Cow position: chrX:31728833-31728417 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 119

Conread position: 3-410
Cow position: chrX:1550335-1549914 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:2479257-2479679 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:15140176-15140581 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 9

Conread position: 3-410
Cow position: chrX:15621162-15621582 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:16279022-16278605 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:18194060-18193639 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:18950366-18950787 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:21226847-21226428 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:21389948-21389527 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:21582812-21582392 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:21833239-21832835 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 284
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:22870192-22869768 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:23280379-23279976 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:23387168-23387584 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:23395977-23395556 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:23452075-23452498 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:23572446-23572869 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:26531335-26530922 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-410
Cow position: chrX:26755259-26755690 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 297
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 76, 9

Conread position: 3-410
Cow position: chrX:27590664-27591074 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 3-410
Cow position: chrX:28624391-28624805 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:29915976-29916397 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-410
Cow position: chrX:30228744-30229163 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:32584561-32584981 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-410
Cow position: chrX:41791342-41791770 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-410
Cow position: chrX:42733236-42732821 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 9

Conread position: 3-411
Cow position: chrX:671633-672045 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 19

Conread position: 3-411
Cow position: chrX:2048482-2048060 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:2103775-2103353 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:2500261-2500682 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:2559590-2560010 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:2579789-2579367 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:2813112-2813535 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:3081761-3082185 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:4343121-4342699 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:4622584-4623005 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:5248755-5248338 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:5289316-5289736 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 3-411
Cow position: chrX:5646734-5647156 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:5866516-5866094 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:6372551-6372128 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-411
Cow position: chrX:6454067-6453645 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:7096828-7096407 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:7755275-7754854 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:8434833-8435250 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:8482809-8482396 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:8590952-8590528 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:9128426-9128003 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:9169244-9169657 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:9642062-9642484 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:11408964-11409386 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:11499413-11499826 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 3-411
Cow position: chrX:11976076-11976497 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:12307387-12307814 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:12310015-12310437 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-411
Cow position: chrX:12346266-12345844 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:12360258-12359835 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:13928381-13928794 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:14598216-14597794 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:15260249-15260667 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:15977583-15978003 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:16040311-16040731 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:16086753-16087175 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:16359639-16360059 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-411
Cow position: chrX:16465670-16465255 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:16782650-16782230 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:16808444-16808865 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:17782870-17782448 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:17994829-17994410 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:18488344-18488766 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:19473790-19474200 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:20020947-20020529 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 9

Conread position: 3-411
Cow position: chrX:21592661-21592241 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-411
Cow position: chrX:21685989-21685567 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 9

Conread position: 3-411
Cow position: chrX:21768174-21767748 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:21793961-21793538 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:22076972-22077392 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:22493377-22492982 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:22564317-22564735 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:22612755-22612351 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:23341622-23342043 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:24413400-24412975 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:24467755-24468175 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-411
Cow position: chrX:24769487-24769908 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:25289309-25289731 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:26275508-26275087 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:26760198-26760620 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:27305299-27304877 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:27759077-27758657 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:28503706-28503284 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:28588341-28587920 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-411
Cow position: chrX:28752970-28753388 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:29225848-29225426 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 9

Conread position: 3-411
Cow position: chrX:29907832-29908254 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:29912709-29912289 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:30053098-30053520 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:30089683-30090094 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 15

Conread position: 3-411
Cow position: chrX:31496106-31495685 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:31978471-31978892 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:32643856-32643434 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:33685501-33685079 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-411
Cow position: chrX:34761436-34761014 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:35533224-35532804 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:36195462-36195044 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:36535365-36535781 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:36729754-36729332 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:37080149-37080566 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:37403866-37404281 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:37852509-37852086 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:38227941-38228368 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 15

Conread position: 3-411
Cow position: chrX:38230897-38231319 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:38852529-38852111 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 3-411
Cow position: chrX:38961476-38961902 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:39185543-39185121 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:39548769-39548347 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-411
Cow position: chrX:39560282-39560711 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 3-411
Cow position: chrX:39713921-39713499 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-411
Cow position: chrX:40224871-40225286 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 10

Conread position: 3-411
Cow position: chrX:46297030-46296610 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 17

Conread position: 3-412
Cow position: chrX:14124876-14125297 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 9

Conread position: 3-414
Cow position: chrX:6581304-6580880 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-416
Cow position: chrX:30172337-30172762 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 3-417
Cow position: chrX:10440464-10440889 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 283
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 33, 15

Conread position: 4-323
Cow position: chrX:35240235-35239912 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 29, 8

Conread position: 4-380
Cow position: chrX:12179048-12178654 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 4-387
Cow position: chrX:20998908-20999294 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 261
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 29, 16

Conread position: 4-410
Cow position: chrX:29099785-29099368 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 4-411
Cow position: chrX:34442073-34442480 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 14

Conread position: 5-399
Cow position: chrX:23022681-23022278 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 7

Conread position: 5-399
Cow position: chrX:28518352-28518760 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 5-410
Cow position: chrX:24483001-24483413 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 17

Conread position: 5-410
Cow position: chrX:30455254-30455667 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 5-411
Cow position: chrX:14462677-14462268 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 7

Conread position: 5-411
Cow position: chrX:14801450-14801870 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 7

Conread position: 5-411
Cow position: chrX:27754797-27754376 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 7

Conread position: 7-300
Cow position: chrX:27704964-27704662 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 11

Conread position: 7-396
Cow position: chrX:2648993-2649387 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 269
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 10, 56

Conread position: 8-405
Cow position: chrX:35024422-35024023 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 207

Conread position: 12-324
Cow position: chrX:23317050-23317370 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 207

Conread position: 12-351
Cow position: chrX:1947597-1947932 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 48

Conread position: 12-378
Cow position: chrX:39702215-39701852 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 35, 212

Conread position: 12-385
Cow position: chrX:7551439-7551826 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 12-385
Cow position: chrX:23038635-23039009 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 52

Conread position: 12-385
Cow position: chrX:29083429-29083042 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 12-396
Cow position: chrX:22888022-22887625 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 206

Conread position: 12-396
Cow position: chrX:27450698-27451081 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 53

Conread position: 12-411
Cow position: chrX:20356633-20357051 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 88

Conread position: 12-411
Cow position: chrX:21343758-21343343 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 288

Conread position: 13-397
Cow position: chrX:28633115-28633491 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 59

Conread position: 13-411
Cow position: chrX:28557713-28557315 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 34

Conread position: 16-308
Cow position: chrX:23969709-23969408 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 67, 136

Conread position: 16-385
Cow position: chrX:16854028-16854390 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 197

Conread position: 16-397
Cow position: chrX:22125497-22125892 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 272
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 199

Conread position: 16-398
Cow position: chrX:47000293-47000692 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 266
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 17, 138

Conread position: 16-399
Cow position: chrX:17891905-17891506 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 17-385
Cow position: chrX:30136506-30136891 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 264
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 16, 134

Conread position: 17-385
Cow position: chrX:44901485-44901119 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 14

Conread position: 19-411
Cow position: chrX:26230403-26230810 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 20-411
Cow position: chrX:11145979-11146386 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 25-395
Cow position: chrX:5361355-5360974 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 6

Conread position: 25-396
Cow position: chrX:39352292-39352646 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 48, 6

Conread position: 25-398
Cow position: chrX:15039733-15040103 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 6

Conread position: 25-405
Cow position: chrX:34554089-34553712 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 6

Conread position: 25-411
Cow position: chrX:25573689-25573301 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 6

Conread position: 33-333
Cow position: chrX:21662374-21662072 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 160

Conread position: 33-411
Cow position: chrX:30836725-30836335 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 64

Conread position: 37-400
Cow position: chrX:28646945-28647311 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 45-411
Cow position: chrX:32063845-32064219 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 86

Conread position: 64-380
Cow position: chrX:12651514-12651837 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 64-385
Cow position: chrX:12290022-12289705 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 24

Conread position: 64-399
Cow position: chrX:21818174-21818494 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 93

Conread position: 64-411
Cow position: chrX:16085351-16085710 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 64-411
Cow position: chrX:18023685-18024044 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 64-411
Cow position: chrX:30964679-30965038 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 66-396
Cow position: chrX:40693424-40693769 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 239

Conread position: 66-398
Cow position: chrX:31261333-31261672 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 82

Conread position: 66-405
Cow position: chrX:4407184-4406838 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 66-410
Cow position: chrX:29288290-29287947 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 66-411
Cow position: chrX:42222470-42222821 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 213

Conread position: 67-396
Cow position: chrX:31804186-31803853 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 218
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 95

Conread position: 69-411
Cow position: chrX:10528489-10528836 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 23

Conread position: 70-396
Cow position: chrX:3582244-3581900 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 101

Conread position: 70-406
Cow position: chrX:22308280-22308613 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 146

Conread position: 70-412
Cow position: chrX:22838569-22838219 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 23

Conread position: 74-401
Cow position: chrX:38218271-38217938 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 247

Conread position: 78-384
Cow position: chrX:34222052-34221734 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 11

Conread position: 78-400
Cow position: chrX:22819366-22819037 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 79-347
Cow position: chrX:24317109-24316835 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 102

Conread position: 79-396
Cow position: chrX:28133385-28133063 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 57

Conread position: 79-399
Cow position: chrX:45373821-45374147 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 79-411
Cow position: chrX:20675156-20674816 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 79-411
Cow position: chrX:22118208-22118546 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 37

Conread position: 80-399
Cow position: chrX:23221759-23222071 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 112

Conread position: 82-395
Cow position: chrX:7485090-7484771 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 9

Conread position: 82-398
Cow position: chrX:4767974-4767658 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 91

Conread position: 82-411
Cow position: chrX:17290463-17290131 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 9

Conread position: 82-411
Cow position: chrX:25817538-25817869 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 62

Conread position: 83-411
Cow position: chrX:17889578-17889903 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 183

Conread position: 88-411
Cow position: chrX:3155307-3155632 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 33, 94

Conread position: 91-411
Cow position: chrX:24346324-24345997 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 99-409
Cow position: chrX:26618391-26618074 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 106-407
Cow position: chrX:43075141-43074836 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 177, 0

Conread position: 112-399
Cow position: chrX:40184325-40184033 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 114-399
Cow position: chrX:39698011-39697724 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 175, 17

Conread position: 114-408
Cow position: chrX:15175302-15175597 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 175, 93

Conread position: 114-411
Cow position: chrX:34094956-34094654 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 117-399
Cow position: chrX:28058569-28058282 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 130-399
Cow position: chrX:34993410-34993147 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 142, 44

Conread position: 137-411
Cow position: chrX:7120834-7120555 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 152, 0

Conread position: 142-411
Cow position: chrX:9763849-9764123 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 147, 0

Conread position: 142-411
Cow position: chrX:16803645-16803918 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 148-351
Cow position: chrX:158828-158619 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 24, 66

Conread position: 148-398
Cow position: chrX:24447170-24446915 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 141, 0

Conread position: 152-396
Cow position: chrX:32329420-32329172 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 133, 94

Conread position: 153-396
Cow position: chrX:38999042-38998804 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 184, 21

Conread position: 155-410
Cow position: chrX:5375068-5375328 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 202

Conread position: 160-399
Cow position: chrX:3652871-3652634 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 139, 54

Conread position: 160-399
Cow position: chrX:9261611-9261374 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 179, 72

Conread position: 170-317
Cow position: chrX:17229158-17229011 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 113, 85

Conread position: 175-399
Cow position: chrX:40827922-40828146 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 155, 90

Conread position: 179-385
Cow position: chrX:24321442-24321653 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 72, 0

Conread position: 181-411
Cow position: chrX:29930209-29930444 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 108, 0

Conread position: 191-396
Cow position: chrX:12996737-12996947 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 195-396
Cow position: chrX:20742022-20741816 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 94, 0

Conread position: 195-399
Cow position: chrX:29047284-29047075 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 195-411
Cow position: chrX:24734836-24734612 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 32, 120

Conread position: 195-411
Cow position: chrX:30435448-30435670 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 73, 0

Conread position: 196-396
Cow position: chrX:10438739-10438942 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 87, 21

Conread position: 204-411
Cow position: chrX:6655860-6656070 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 126, 81

Conread position: 212-410
Cow position: chrX:24928190-24928393 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 77, 0

Conread position: 215-411
Cow position: chrX:33830185-33829992 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 115, 51

Conread position: 218-410
Cow position: chrX:5294200-5294398 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 220-396
Cow position: chrX:28765964-28766141 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 63, 162

Conread position: 220-411
Cow position: chrX:37815322-37815127 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 69, 96

Conread position: 224-385
Cow position: chrX:2932862-2933027 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 224-411
Cow position: chrX:37488097-37487899 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 227-396
Cow position: chrX:8104369-8104543 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 41

Conread position: 227-411
Cow position: chrX:21892645-21892456 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 233-411
Cow position: chrX:27595095-27595278 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 240-365
Cow position: chrX:16688180-16688053 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 115

Conread position: 240-411
Cow position: chrX:16046097-16045921 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 242-411
Cow position: chrX:22616249-22616423 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 244-411
Cow position: chrX:29170661-29170833 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 296-411
Cow position: chrX:37186946-37186830 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 86, 0

Show alignments to all cow chromosomes.