Cow genome map

Conread name: ramn3524b_e9.y1

Conread position: 1-132
Cow position: chr1:45573614-45573482 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 84

Conread position: 1-151
Cow position: chr1:52385108-52384957 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 1-155
Cow position: chr1:45505736-45505882 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 63

Conread position: 1-166
Cow position: chr1:86503164-86503330 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 41

Conread position: 1-172
Cow position: chr1:11938383-11938211 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 1-174
Cow position: chr1:67674412-67674579 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 159, 58

Conread position: 1-176
Cow position: chr1:78034709-78034880 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 74, 0

Conread position: 1-178
Cow position: chr1:78782182-78781998 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 100, 176

Conread position: 1-181
Cow position: chr1:9478421-9478602 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 1-187
Cow position: chr1:5200218-5200404 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-189
Cow position: chr1:25021882-25022064 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 1-202
Cow position: chr1:61134611-61134402 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 164
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 170, 0

Conread position: 1-203
Cow position: chr1:54694820-54694617 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 164, 0

Conread position: 1-203
Cow position: chr1:100762270-100762074 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 141, 67

Conread position: 1-206
Cow position: chr1:101525724-101525931 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 67, 0

Conread position: 1-207
Cow position: chr1:17196429-17196634 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 85, 0

Conread position: 1-211
Cow position: chr1:31855033-31855258 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 1-220
Cow position: chr1:71350528-71350747 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-221
Cow position: chr1:55705051-55705267 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 132, 34

Conread position: 1-221
Cow position: chr1:70435182-70434978 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 1-221
Cow position: chr1:101267806-101268022 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 15, 26

Conread position: 1-222
Cow position: chr1:41697250-41697037 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 60

Conread position: 1-222
Cow position: chr1:70227495-70227716 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 1-225
Cow position: chr1:18936641-18936858 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 54, 0

Conread position: 1-226
Cow position: chr1:77986220-77986452 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 174, 0

Conread position: 1-228
Cow position: chr1:77720064-77720271 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 221, 58

Conread position: 1-231
Cow position: chr1:76612936-76613168 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 2-133
Cow position: chr1:82115795-82115921 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 2-136
Cow position: chr1:64706097-64705963 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 113
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 2-138
Cow position: chr1:44814468-44814608 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 2-142
Cow position: chr1:20202495-20202361 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 2-142
Cow position: chr1:73374903-73375044 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 2-143
Cow position: chr1:57395310-57395450 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 2-146
Cow position: chr1:69911307-69911157 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 2-147
Cow position: chr1:55260039-55260183 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 2-148
Cow position: chr1:99031781-99031927 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 92

Conread position: 2-151
Cow position: chr1:95809750-95809600 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 74, 140

Conread position: 2-154
Cow position: chr1:7313490-7313642 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 86

Conread position: 2-155
Cow position: chr1:36237975-36237826 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 118, 0

Conread position: 2-156
Cow position: chr1:10523894-10523744 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 2-159
Cow position: chr1:3685784-3685635 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 2-166
Cow position: chr1:46795951-46795792 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 2-173
Cow position: chr1:70291998-70291814 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 2-174
Cow position: chr1:75227130-75227293 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 2-176
Cow position: chr1:77404708-77404886 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 2-179
Cow position: chr1:1605936-1606113 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 74, 150

Conread position: 2-179
Cow position: chr1:74919780-74919958 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 73, 0

Conread position: 2-183
Cow position: chr1:102423990-102423810 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 28, 0

Conread position: 2-184
Cow position: chr1:1380196-1380013 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 2-184
Cow position: chr1:81466769-81466952 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 103

Conread position: 2-187
Cow position: chr1:36018589-36018764 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 10, 0

Conread position: 2-187
Cow position: chr1:64458167-64457978 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 70, 0

Conread position: 2-187
Cow position: chr1:77685783-77685968 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 2-188
Cow position: chr1:89297912-89298098 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 126

Conread position: 2-188
Cow position: chr1:89301521-89301707 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 126

Conread position: 2-189
Cow position: chr1:15628474-15628293 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 167, 55

Conread position: 2-189
Cow position: chr1:31340572-31340760 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 2-189
Cow position: chr1:45099951-45099771 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 167, 67

Conread position: 2-189
Cow position: chr1:63241171-63240984 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 2-190
Cow position: chr1:46939682-46939874 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 155
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 58, 190

Conread position: 2-192
Cow position: chr1:98380100-98380289 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 96, 0

Conread position: 2-193
Cow position: chr1:20537397-20537212 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 2-194
Cow position: chr1:90595382-90595566 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 168, 61

Conread position: 2-195
Cow position: chr1:61146312-61146124 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 189, 85

Conread position: 2-197
Cow position: chr1:42404344-42404139 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 55, 178

Conread position: 2-197
Cow position: chr1:89437533-89437711 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 2-200
Cow position: chr1:4294540-4294344 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 2-200
Cow position: chr1:78811233-78811038 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 2-201
Cow position: chr1:1878218-1878019 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 2-201
Cow position: chr1:8172128-8172326 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 188, 0

Conread position: 2-202
Cow position: chr1:35671731-35671539 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 192, 58

Conread position: 2-202
Cow position: chr1:76518620-76518420 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-203
Cow position: chr1:79640094-79640291 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 2-203
Cow position: chr1:100852897-100852706 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 2-204
Cow position: chr1:56117667-56117461 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 2-205
Cow position: chr1:41056874-41056673 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 2-206
Cow position: chr1:29329741-29329535 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 55, 0

Conread position: 2-207
Cow position: chr1:92197649-92197448 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 88, 20

Conread position: 2-208
Cow position: chr1:21681339-21681545 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 2-209
Cow position: chr1:7793339-7793530 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 2-210
Cow position: chr1:95153069-95152861 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-213
Cow position: chr1:2317161-2317391 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 2-213
Cow position: chr1:48447665-48447459 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 125

Conread position: 2-215
Cow position: chr1:17317148-17317371 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 168

Conread position: 2-217
Cow position: chr1:78079918-78079702 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 104, 65

Conread position: 2-218
Cow position: chr1:6166427-6166229 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 2-218
Cow position: chr1:8271657-8271872 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 2-218
Cow position: chr1:22035803-22035594 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 2-218
Cow position: chr1:22824104-22823887 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 2-218
Cow position: chr1:33206679-33206894 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 193

Conread position: 2-218
Cow position: chr1:42398001-42398209 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 2-218
Cow position: chr1:63079196-63078992 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 0

Conread position: 2-218
Cow position: chr1:71770111-71770327 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 107, 100

Conread position: 2-218
Cow position: chr1:74955837-74956035 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 2-218
Cow position: chr1:75247964-75247748 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 93

Conread position: 2-218
Cow position: chr1:88397647-88397861 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 180, 0

Conread position: 2-218
Cow position: chr1:91023273-91023483 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 2-218
Cow position: chr1:99570303-99570505 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 120, 9

Conread position: 2-219
Cow position: chr1:49317306-49317515 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 2-219
Cow position: chr1:78794041-78794250 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 2-220
Cow position: chr1:852368-852150 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-220
Cow position: chr1:36998377-36998166 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 75, 0

Conread position: 2-220
Cow position: chr1:63434603-63434826 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 98, 0

Conread position: 2-221
Cow position: chr1:3815486-3815708 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 74, 40

Conread position: 2-221
Cow position: chr1:16766891-16767105 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 73, 0

Conread position: 2-221
Cow position: chr1:42541786-42541577 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 17, 0

Conread position: 2-221
Cow position: chr1:88338845-88338646 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 2-222
Cow position: chr1:12464470-12464686 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 72

Conread position: 2-222
Cow position: chr1:24777789-24778013 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 52, 133

Conread position: 2-222
Cow position: chr1:49824870-49825088 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 167, 70

Conread position: 2-222
Cow position: chr1:54267745-54267959 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 2-222
Cow position: chr1:60987187-60986966 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 2-222
Cow position: chr1:68961522-68961306 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 146, 170

Conread position: 2-222
Cow position: chr1:69551284-69551505 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 90

Conread position: 2-222
Cow position: chr1:72422211-72422430 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 2-222
Cow position: chr1:73721559-73721338 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 2-222
Cow position: chr1:83072637-83072419 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 79, 0

Conread position: 2-222
Cow position: chr1:89381469-89381254 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 2-222
Cow position: chr1:90621311-90621528 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 140, 45

Conread position: 2-222
Cow position: chr1:95618836-95618620 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 2-224
Cow position: chr1:58653243-58653466 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 218, 0

Conread position: 2-225
Cow position: chr1:196811-197030 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 2-225
Cow position: chr1:1496332-1496555 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 209

Conread position: 2-225
Cow position: chr1:31819298-31819086 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 41, 0

Conread position: 2-225
Cow position: chr1:47886285-47886509 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 65

Conread position: 2-225
Cow position: chr1:49753679-49753456 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 2-225
Cow position: chr1:51533657-51533866 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 2-225
Cow position: chr1:89388538-89388313 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 168, 75

Conread position: 2-226
Cow position: chr1:22637229-22637456 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 168, 76

Conread position: 2-226
Cow position: chr1:88360080-88359851 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 2-226
Cow position: chr1:101835011-101834792 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 74, 20

Conread position: 2-227
Cow position: chr1:21561215-21560986 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 227

Conread position: 2-227
Cow position: chr1:64329127-64328894 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 55, 18

Conread position: 2-227
Cow position: chr1:97820879-97820659 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 22, 117

Conread position: 2-229
Cow position: chr1:36880482-36880249 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 167, 87

Conread position: 2-230
Cow position: chr1:34771304-34771535 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 20

Conread position: 2-230
Cow position: chr1:95638030-95637800 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 218, 0

Conread position: 2-231
Cow position: chr1:35162600-35162378 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 179
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 219, 38

Conread position: 2-231
Cow position: chr1:50930785-50931008 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 217, 79

Conread position: 2-231
Cow position: chr1:53623149-53622927 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 58, 0

Conread position: 2-231
Cow position: chr1:66898299-66898531 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 2-231
Cow position: chr1:67529251-67529024 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 2-231
Cow position: chr1:69265022-69264780 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 55, 10

Conread position: 2-231
Cow position: chr1:74319588-74319814 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 168, 116

Conread position: 2-231
Cow position: chr1:74929513-74929749 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 167, 0

Conread position: 3-114
Cow position: chr1:36306872-36306761 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-116
Cow position: chr1:14067249-14067360 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 3-123
Cow position: chr1:8778144-8778258 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 3-129
Cow position: chr1:101490385-101490259 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-130
Cow position: chr1:43340439-43340564 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 3-133
Cow position: chr1:8134119-8133990 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 3-133
Cow position: chr1:67160094-67160223 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 3-136
Cow position: chr1:45290042-45289915 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 3-140
Cow position: chr1:65160324-65160188 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 3-141
Cow position: chr1:1915833-1915968 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 3-141
Cow position: chr1:3535263-3535129 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 3-141
Cow position: chr1:83246622-83246484 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 115
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 3-143
Cow position: chr1:50854107-50853965 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 3-143
Cow position: chr1:50906487-50906623 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 3-143
Cow position: chr1:73397877-73398017 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 119
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-147
Cow position: chr1:11107441-11107297 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-147
Cow position: chr1:31274793-31274937 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-147
Cow position: chr1:74304885-74305029 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-148
Cow position: chr1:6398310-6398467 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 3-150
Cow position: chr1:36887136-36887277 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 3-150
Cow position: chr1:42592091-42592236 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 3-151
Cow position: chr1:5431258-5431111 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 3-151
Cow position: chr1:47190799-47190946 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 3-151
Cow position: chr1:100152478-100152327 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 136

Conread position: 3-152
Cow position: chr1:90192614-90192464 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 3-154
Cow position: chr1:4180757-4180908 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr1:6874009-6873857 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 3-155
Cow position: chr1:69250626-69250479 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 52

Conread position: 3-156
Cow position: chr1:3271343-3271191 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 79, 146

Conread position: 3-156
Cow position: chr1:23050629-23050476 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 114

Conread position: 3-158
Cow position: chr1:41953805-41953960 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-158
Cow position: chr1:43379167-43379320 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 70, 0

Conread position: 3-158
Cow position: chr1:52509570-52509723 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 3-158
Cow position: chr1:63212065-63212217 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 23

Conread position: 3-158
Cow position: chr1:64887315-64887469 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 3-159
Cow position: chr1:19384263-19384415 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 3-159
Cow position: chr1:30422122-30422278 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-159
Cow position: chr1:40284455-40284598 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 3-159
Cow position: chr1:44321403-44321557 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 3-162
Cow position: chr1:30028038-30028194 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 3-162
Cow position: chr1:34767488-34767326 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 132

Conread position: 3-162
Cow position: chr1:53474342-53474194 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 3-162
Cow position: chr1:79169959-79170115 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 3-163
Cow position: chr1:69442321-69442481 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 3-163
Cow position: chr1:69905685-69905843 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 3-164
Cow position: chr1:41022610-41022455 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 136
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 70, 0

Conread position: 3-164
Cow position: chr1:79001651-79001812 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 54, 14

Conread position: 3-166
Cow position: chr1:66445150-66444994 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 152, 19

Conread position: 3-166
Cow position: chr1:71664700-71664863 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 136
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 3-167
Cow position: chr1:80385292-80385454 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 3-168
Cow position: chr1:7966041-7965878 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 3-168
Cow position: chr1:56749008-56748844 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 3-168
Cow position: chr1:87934086-87934239 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 3-169
Cow position: chr1:5479464-5479629 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 3-169
Cow position: chr1:22448048-22448224 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 3-169
Cow position: chr1:64421730-64421572 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 3-172
Cow position: chr1:23101869-23101705 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 79

Conread position: 3-172
Cow position: chr1:30469978-30469809 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-173
Cow position: chr1:4618548-4618716 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 3-173
Cow position: chr1:40077984-40077821 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 3-174
Cow position: chr1:22231845-22231674 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 3-174
Cow position: chr1:33720298-33720127 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 3-175
Cow position: chr1:42775100-42774935 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 3-175
Cow position: chr1:60403963-60403791 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-175
Cow position: chr1:72356562-72356381 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 3-175
Cow position: chr1:79631340-79631510 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 3-175
Cow position: chr1:92188153-92187982 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 3-176
Cow position: chr1:3244408-3244235 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-176
Cow position: chr1:11770048-11770212 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 3-176
Cow position: chr1:55110696-55110516 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 3-176
Cow position: chr1:68730198-68730025 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 87

Conread position: 3-176
Cow position: chr1:100513091-100512921 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 3-176
Cow position: chr1:100800575-100800745 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 147, 65

Conread position: 3-177
Cow position: chr1:91743269-91743438 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 3-179
Cow position: chr1:31801726-31801899 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 147, 44

Conread position: 3-179
Cow position: chr1:67616957-67616782 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 3-179
Cow position: chr1:79178825-79178649 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 146
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 3-180
Cow position: chr1:24792984-24792807 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-180
Cow position: chr1:84787454-84787293 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 3-180
Cow position: chr1:102797806-102797978 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 3-181
Cow position: chr1:7229491-7229667 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 3-181
Cow position: chr1:49759738-49759560 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-181
Cow position: chr1:59551633-59551457 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 59

Conread position: 3-181
Cow position: chr1:78784707-78784884 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 173, 0

Conread position: 3-181
Cow position: chr1:96478011-96477834 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 157, 0

Conread position: 3-181
Cow position: chr1:102523446-102523622 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 3-182
Cow position: chr1:32035520-32035692 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 0

Conread position: 3-182
Cow position: chr1:44600169-44600346 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 3-182
Cow position: chr1:55790387-55790554 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 3-182
Cow position: chr1:97986250-97986431 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 3-183
Cow position: chr1:3607989-3607821 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 3-183
Cow position: chr1:53441921-53442095 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 75, 114

Conread position: 3-185
Cow position: chr1:39683948-39684129 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 111

Conread position: 3-185
Cow position: chr1:46886423-46886244 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 26

Conread position: 3-185
Cow position: chr1:63461072-63460893 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 78, 0

Conread position: 3-185
Cow position: chr1:69346782-69346964 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-185
Cow position: chr1:95703998-95703820 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 69, 0

Conread position: 3-186
Cow position: chr1:12848263-12848081 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 3-186
Cow position: chr1:16785196-16785369 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 3-186
Cow position: chr1:19599166-19599347 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 61, 0

Conread position: 3-186
Cow position: chr1:29671026-29671210 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 19

Conread position: 3-186
Cow position: chr1:82538121-82537944 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 59

Conread position: 3-186
Cow position: chr1:85339571-85339401 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 3-186
Cow position: chr1:98060253-98060075 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 166, 59

Conread position: 3-187
Cow position: chr1:38544052-38544239 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 52, 162

Conread position: 3-187
Cow position: chr1:68897074-68897258 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-187
Cow position: chr1:94823195-94823379 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 3-188
Cow position: chr1:1085654-1085469 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-188
Cow position: chr1:5284032-5284217 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 166

Conread position: 3-188
Cow position: chr1:15875853-15875672 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 81, 0

Conread position: 3-188
Cow position: chr1:66194185-66194368 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 3-188
Cow position: chr1:83222182-83222007 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 25

Conread position: 3-188
Cow position: chr1:84782554-84782739 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-188
Cow position: chr1:101883197-101883382 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-189
Cow position: chr1:1347440-1347624 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 3-189
Cow position: chr1:24656450-24656256 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 111

Conread position: 3-189
Cow position: chr1:46172799-46172616 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 21

Conread position: 3-189
Cow position: chr1:52679783-52679597 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 167

Conread position: 3-189
Cow position: chr1:56719534-56719351 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 167, 75

Conread position: 3-189
Cow position: chr1:58420392-58420214 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 3-189
Cow position: chr1:67291353-67291163 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 49, 127

Conread position: 3-189
Cow position: chr1:68710478-68710288 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 0

Conread position: 3-189
Cow position: chr1:81638733-81638559 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 152
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 3-189
Cow position: chr1:83677131-83677316 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 164, 84

Conread position: 3-189
Cow position: chr1:85622726-85622540 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-191
Cow position: chr1:525000-524817 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 3-191
Cow position: chr1:22828379-22828563 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 166, 70

Conread position: 3-192
Cow position: chr1:47242266-47242455 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-192
Cow position: chr1:60603376-60603569 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 3-192
Cow position: chr1:70483141-70483326 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 3-192
Cow position: chr1:78029832-78030024 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 85, 0

Conread position: 3-193
Cow position: chr1:13684912-13685093 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 3-193
Cow position: chr1:23055254-23055054 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 3-193
Cow position: chr1:31231546-31231735 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 3-193
Cow position: chr1:34001237-34001054 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 128, 50

Conread position: 3-193
Cow position: chr1:40303742-40303558 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 3-193
Cow position: chr1:63994361-63994548 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 3-193
Cow position: chr1:97536472-97536295 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 179, 57

Conread position: 3-194
Cow position: chr1:731776-731970 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 163
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 69, 19

Conread position: 3-194
Cow position: chr1:5872580-5872771 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 73, 184

Conread position: 3-194
Cow position: chr1:12748983-12749172 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 158, 0

Conread position: 3-195
Cow position: chr1:87149622-87149810 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 151
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 58, 0

Conread position: 3-196
Cow position: chr1:65323446-65323640 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 3-196
Cow position: chr1:95049671-95049860 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 73, 19

Conread position: 3-197
Cow position: chr1:30949176-30948995 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 3-197
Cow position: chr1:55685784-55685975 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 3-197
Cow position: chr1:84595085-84594891 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-197
Cow position: chr1:87888584-87888392 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 103, 70

Conread position: 3-198
Cow position: chr1:82336865-82336680 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 72, 0

Conread position: 3-199
Cow position: chr1:5821710-5821514 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-199
Cow position: chr1:32014385-32014199 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 160
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 59, 0

Conread position: 3-199
Cow position: chr1:81364457-81364261 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 3-199
Cow position: chr1:98583942-98583753 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 166, 66

Conread position: 3-200
Cow position: chr1:23633733-23633932 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 3-200
Cow position: chr1:100573434-100573627 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 3-201
Cow position: chr1:41137954-41138145 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 105, 72

Conread position: 3-201
Cow position: chr1:70344239-70344039 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 23

Conread position: 3-201
Cow position: chr1:73551308-73551511 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 63, 0

Conread position: 3-202
Cow position: chr1:5010639-5010844 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 179, 0

Conread position: 3-202
Cow position: chr1:99604998-99605189 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 3-202
Cow position: chr1:101007242-101007431 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 3-203
Cow position: chr1:101439295-101439485 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 139, 23

Conread position: 3-204
Cow position: chr1:43499116-43499300 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 3-204
Cow position: chr1:48618053-48618248 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 3-204
Cow position: chr1:95156771-95156968 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 3-205
Cow position: chr1:844981-844780 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 3-205
Cow position: chr1:7443176-7442970 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 164
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 64, 0

Conread position: 3-206
Cow position: chr1:11488964-11489167 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 23

Conread position: 3-206
Cow position: chr1:86486873-86486671 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 188, 0

Conread position: 3-207
Cow position: chr1:1489211-1489408 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 3-207
Cow position: chr1:6398971-6398767 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-207
Cow position: chr1:24530692-24530495 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 3-207
Cow position: chr1:79146620-79146824 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 62

Conread position: 3-207
Cow position: chr1:81290698-81290500 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 3-207
Cow position: chr1:93499813-93499612 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 163, 72

Conread position: 3-208
Cow position: chr1:20104460-20104258 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 3-208
Cow position: chr1:76739720-76739917 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 3-208
Cow position: chr1:97540833-97540627 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 3-210
Cow position: chr1:4539225-4539433 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 87, 72

Conread position: 3-210
Cow position: chr1:9637224-9637018 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 200, 69

Conread position: 3-210
Cow position: chr1:60350329-60350129 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 185, 54

Conread position: 3-211
Cow position: chr1:759218-759429 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 3-211
Cow position: chr1:33080616-33080808 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 3-212
Cow position: chr1:4582744-4582538 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 202, 19

Conread position: 3-212
Cow position: chr1:20000562-20000760 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 3-212
Cow position: chr1:21508590-21508380 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 202, 0

Conread position: 3-213
Cow position: chr1:6790968-6790762 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 3-213
Cow position: chr1:96558652-96558863 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 3-214
Cow position: chr1:6031820-6031610 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 20

Conread position: 3-214
Cow position: chr1:16855507-16855713 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 3-214
Cow position: chr1:36688186-36688392 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 3-215
Cow position: chr1:33846376-33846584 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 3-215
Cow position: chr1:61011369-61011166 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 169
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 57, 0

Conread position: 3-215
Cow position: chr1:92075674-92075474 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 3-216
Cow position: chr1:6381970-6381756 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 119

Conread position: 3-216
Cow position: chr1:26178614-26178827 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 3-216
Cow position: chr1:45315437-45315652 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-216
Cow position: chr1:47790474-47790678 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 57, 0

Conread position: 3-216
Cow position: chr1:79004170-79003960 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 120

Conread position: 3-216
Cow position: chr1:82870321-82870540 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 127, 72

Conread position: 3-216
Cow position: chr1:90267918-90267705 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 185

Conread position: 3-217
Cow position: chr1:13157388-13157168 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 166, 0

Conread position: 3-217
Cow position: chr1:15103078-15102872 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 3-217
Cow position: chr1:26895618-26895828 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 80, 0

Conread position: 3-217
Cow position: chr1:29481433-29481648 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 113, 0

Conread position: 3-217
Cow position: chr1:36080021-36079806 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 202, 0

Conread position: 3-217
Cow position: chr1:43148343-43148565 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 55, 19

Conread position: 3-217
Cow position: chr1:46693457-46693671 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 85, 96

Conread position: 3-217
Cow position: chr1:48606228-48606014 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-217
Cow position: chr1:71228289-71228076 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 154, 0

Conread position: 3-217
Cow position: chr1:72841534-72841318 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 3-217
Cow position: chr1:73719665-73719444 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 70, 0

Conread position: 3-217
Cow position: chr1:83659081-83659295 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-217
Cow position: chr1:92580953-92580741 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 3-217
Cow position: chr1:97232165-97231943 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 73, 21

Conread position: 3-218
Cow position: chr1:1980916-1981131 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 19

Conread position: 3-218
Cow position: chr1:3962482-3962716 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 3-218
Cow position: chr1:10941904-10942112 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 57, 0

Conread position: 3-218
Cow position: chr1:10964482-10964274 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 3-218
Cow position: chr1:12222410-12222625 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-218
Cow position: chr1:14006319-14006098 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 178, 0

Conread position: 3-218
Cow position: chr1:16060814-16061022 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 3-218
Cow position: chr1:20871362-20871577 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-218
Cow position: chr1:37917985-37918207 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 3-218
Cow position: chr1:42152295-42152503 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 168, 57

Conread position: 3-218
Cow position: chr1:47658542-47658327 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-218
Cow position: chr1:49077129-49077349 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 67

Conread position: 3-218
Cow position: chr1:49082940-49082725 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-218
Cow position: chr1:51860370-51860579 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 3-218
Cow position: chr1:53394269-53394047 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 50, 110

Conread position: 3-218
Cow position: chr1:54206625-54206832 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 3-218
Cow position: chr1:55230167-55229958 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 53, 0

Conread position: 3-218
Cow position: chr1:57088046-57087824 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 126

Conread position: 3-218
Cow position: chr1:63390570-63390785 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-218
Cow position: chr1:64572708-64572497 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 74, 0

Conread position: 3-218
Cow position: chr1:68863213-68863017 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 3-218
Cow position: chr1:70428931-70428719 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 137, 0

Conread position: 3-218
Cow position: chr1:72034734-72034941 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 3-218
Cow position: chr1:72092429-72092641 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 0

Conread position: 3-218
Cow position: chr1:75745054-75744844 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 3-218
Cow position: chr1:77739918-77739704 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 3-218
Cow position: chr1:78857132-78857347 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 3-218
Cow position: chr1:79846053-79846269 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 3-218
Cow position: chr1:81515433-81515215 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 3-218
Cow position: chr1:81858707-81858920 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 63

Conread position: 3-218
Cow position: chr1:88618801-88618578 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 70, 27

Conread position: 3-218
Cow position: chr1:95072537-95072314 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 3-218
Cow position: chr1:100400010-100400211 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 167, 90

Conread position: 3-218
Cow position: chr1:100575847-100576049 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 3-218
Cow position: chr1:101916364-101916148 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 61

Conread position: 3-219
Cow position: chr1:22526068-22525860 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 59, 0

Conread position: 3-220
Cow position: chr1:57575570-57575784 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 3-220
Cow position: chr1:69539879-69539671 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 3-220
Cow position: chr1:73904222-73904011 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 159

Conread position: 3-220
Cow position: chr1:78067856-78068089 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 54, 36

Conread position: 3-221
Cow position: chr1:635490-635706 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 72, 0

Conread position: 3-221
Cow position: chr1:4444645-4444862 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 209, 0

Conread position: 3-221
Cow position: chr1:5751509-5751292 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 3-221
Cow position: chr1:31347740-31347955 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 57

Conread position: 3-221
Cow position: chr1:40192509-40192716 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 99

Conread position: 3-221
Cow position: chr1:46030170-46030382 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 88, 74

Conread position: 3-221
Cow position: chr1:54478510-54478308 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 3-221
Cow position: chr1:55753025-55753236 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 3-221
Cow position: chr1:67654131-67654341 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 3-221
Cow position: chr1:67919322-67919114 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 52, 0

Conread position: 3-221
Cow position: chr1:71665740-71665953 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 3-221
Cow position: chr1:83972958-83972743 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 88, 26

Conread position: 3-222
Cow position: chr1:3324068-3323846 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 101

Conread position: 3-222
Cow position: chr1:7748410-7748191 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 73, 23

Conread position: 3-222
Cow position: chr1:7752574-7752357 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 3-222
Cow position: chr1:10778748-10778541 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 26, 0

Conread position: 3-222
Cow position: chr1:14106414-14106640 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 19

Conread position: 3-222
Cow position: chr1:21787518-21787314 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 3-222
Cow position: chr1:22729248-22729034 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 3-222
Cow position: chr1:28563367-28563588 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 57, 100

Conread position: 3-222
Cow position: chr1:30035418-30035194 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 170, 111

Conread position: 3-222
Cow position: chr1:37321816-37322020 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 56

Conread position: 3-222
Cow position: chr1:38706659-38706876 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 3-222
Cow position: chr1:43352459-43352676 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 3-222
Cow position: chr1:54258763-54258545 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 3-222
Cow position: chr1:59519105-59518900 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 3-222
Cow position: chr1:63530753-63530536 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 3-222
Cow position: chr1:64803903-64804124 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-222
Cow position: chr1:65103823-65103599 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 54, 130

Conread position: 3-222
Cow position: chr1:68817607-68817819 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 160, 14

Conread position: 3-222
Cow position: chr1:70094532-70094312 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 85

Conread position: 3-222
Cow position: chr1:70175347-70175561 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 140, 64

Conread position: 3-222
Cow position: chr1:72105594-72105390 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 3-222
Cow position: chr1:81477669-81477891 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 3-222
Cow position: chr1:84103864-84104083 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-222
Cow position: chr1:85818445-85818229 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 3-222
Cow position: chr1:86340264-86340486 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 67, 170

Conread position: 3-222
Cow position: chr1:88913514-88913298 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 76, 0

Conread position: 3-222
Cow position: chr1:89449092-89448878 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 73, 47

Conread position: 3-222
Cow position: chr1:89872162-89871945 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 19

Conread position: 3-222
Cow position: chr1:91651154-91651379 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 166, 0

Conread position: 3-222
Cow position: chr1:96365843-96365642 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 3-222
Cow position: chr1:98422198-98421978 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 70, 182

Conread position: 3-222
Cow position: chr1:98897496-98897716 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 69, 18

Conread position: 3-222
Cow position: chr1:100823234-100823015 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 178

Conread position: 3-222
Cow position: chr1:102266076-102266290 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 65, 0

Conread position: 3-222
Cow position: chr1:102305953-102306162 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 3-222
Cow position: chr1:102648474-102648256 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 3-223
Cow position: chr1:66752438-66752652 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 70, 0

Conread position: 3-223
Cow position: chr1:77647779-77647993 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 3-223
Cow position: chr1:89076429-89076660 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 70, 23

Conread position: 3-224
Cow position: chr1:874857-874630 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 65

Conread position: 3-224
Cow position: chr1:10716699-10716474 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 59, 158

Conread position: 3-224
Cow position: chr1:14308835-14309058 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 217, 0

Conread position: 3-224
Cow position: chr1:42887086-42887301 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 65, 0

Conread position: 3-224
Cow position: chr1:57880587-57880810 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 217, 0

Conread position: 3-224
Cow position: chr1:70538800-70538585 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 209, 57

Conread position: 3-225
Cow position: chr1:15334082-15333871 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 0

Conread position: 3-225
Cow position: chr1:21955178-21955397 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 91, 0

Conread position: 3-225
Cow position: chr1:22192964-22192744 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 56, 0

Conread position: 3-225
Cow position: chr1:24728632-24728864 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 179

Conread position: 3-225
Cow position: chr1:33998943-33998732 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 213, 57

Conread position: 3-225
Cow position: chr1:42175922-42175697 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 174, 74

Conread position: 3-225
Cow position: chr1:43872115-43872345 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 73, 150

Conread position: 3-225
Cow position: chr1:44507162-44506948 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 63, 94

Conread position: 3-225
Cow position: chr1:57053398-57053172 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 173, 72

Conread position: 3-225
Cow position: chr1:61885106-61884886 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 217, 72

Conread position: 3-225
Cow position: chr1:62519560-62519338 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 215, 187

Conread position: 3-225
Cow position: chr1:71119715-71119495 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 66

Conread position: 3-225
Cow position: chr1:73545714-73545935 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 184, 201

Conread position: 3-225
Cow position: chr1:74083994-74084213 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 164

Conread position: 3-225
Cow position: chr1:79164888-79165107 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 107, 84

Conread position: 3-225
Cow position: chr1:79719002-79718786 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 102

Conread position: 3-226
Cow position: chr1:6731373-6731155 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 3-226
Cow position: chr1:6854125-6854329 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 3-226
Cow position: chr1:11771889-11772111 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 3-226
Cow position: chr1:48105231-48105458 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 54, 140

Conread position: 3-226
Cow position: chr1:52435469-52435246 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 68

Conread position: 3-226
Cow position: chr1:73584211-73584435 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 98

Conread position: 3-226
Cow position: chr1:76740478-76740701 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 182

Conread position: 3-226
Cow position: chr1:79684239-79684475 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 156, 0

Conread position: 3-226
Cow position: chr1:91755477-91755254 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-226
Cow position: chr1:92370174-92370395 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 3-227
Cow position: chr1:4691782-4691568 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 3-227
Cow position: chr1:21578004-21577780 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 86

Conread position: 3-227
Cow position: chr1:29474158-29474373 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 31, 0

Conread position: 3-227
Cow position: chr1:50765808-50765585 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 164, 0

Conread position: 3-227
Cow position: chr1:55357095-55357314 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 166

Conread position: 3-227
Cow position: chr1:76037318-76037543 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 3-227
Cow position: chr1:77425417-77425640 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 150, 0

Conread position: 3-227
Cow position: chr1:86061783-86062012 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 168

Conread position: 3-228
Cow position: chr1:30983298-30983521 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 75, 156

Conread position: 3-228
Cow position: chr1:31934698-31934476 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 216, 71

Conread position: 3-228
Cow position: chr1:38754111-38753891 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 200, 66

Conread position: 3-228
Cow position: chr1:43505718-43505498 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 210, 66

Conread position: 3-228
Cow position: chr1:51446076-51445860 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 3-228
Cow position: chr1:85688379-85688150 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 73, 30

Conread position: 3-229
Cow position: chr1:43855483-43855274 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 177
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 217, 60

Conread position: 3-229
Cow position: chr1:76735285-76735507 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 71, 19

Conread position: 3-229
Cow position: chr1:82880825-82880617 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 3-229
Cow position: chr1:86110551-86110767 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 217, 16

Conread position: 3-230
Cow position: chr1:6394751-6394528 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 69, 0

Conread position: 3-230
Cow position: chr1:7740137-7739915 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 67

Conread position: 3-230
Cow position: chr1:11226035-11226277 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 62, 142

Conread position: 3-230
Cow position: chr1:16961800-16962041 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 66, 0

Conread position: 3-230
Cow position: chr1:95558233-95558006 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 217, 9

Conread position: 3-231
Cow position: chr1:628162-627929 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 173, 84

Conread position: 3-231
Cow position: chr1:6287344-6287114 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 217, 79

Conread position: 3-231
Cow position: chr1:6304683-6304895 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 3-231
Cow position: chr1:6590231-6590007 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 176
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 65, 206

Conread position: 3-231
Cow position: chr1:7453108-7452879 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 57, 130

Conread position: 3-231
Cow position: chr1:11172562-11172344 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 3-231
Cow position: chr1:11853492-11853717 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 72, 27

Conread position: 3-231
Cow position: chr1:17056184-17055963 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 3-231
Cow position: chr1:17875519-17875737 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 3-231
Cow position: chr1:20667556-20667773 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 3-231
Cow position: chr1:27145450-27145681 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 143

Conread position: 3-231
Cow position: chr1:30189351-30189116 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 3-231
Cow position: chr1:34160022-34159804 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 135, 57

Conread position: 3-231
Cow position: chr1:36921215-36920987 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 3-231
Cow position: chr1:37695709-37695941 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 64

Conread position: 3-231
Cow position: chr1:37726220-37726453 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 3-231
Cow position: chr1:42482394-42482171 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 69

Conread position: 3-231
Cow position: chr1:48443997-48444225 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 3-231
Cow position: chr1:51394612-51394386 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 215, 69

Conread position: 3-231
Cow position: chr1:52912698-52912931 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 131

Conread position: 3-231
Cow position: chr1:53374621-53374400 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 73, 19

Conread position: 3-231
Cow position: chr1:54156540-54156766 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 73

Conread position: 3-231
Cow position: chr1:56225660-56225435 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 213, 15

Conread position: 3-231
Cow position: chr1:58347226-58347455 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 73, 16

Conread position: 3-231
Cow position: chr1:60045181-60044954 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 91

Conread position: 3-231
Cow position: chr1:60490701-60490470 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 85, 148

Conread position: 3-231
Cow position: chr1:61846352-61846112 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 0

Conread position: 3-231
Cow position: chr1:65318771-65318542 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 98

Conread position: 3-231
Cow position: chr1:66138516-66138290 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 154

Conread position: 3-231
Cow position: chr1:67585745-67585529 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 102, 0

Conread position: 3-231
Cow position: chr1:73457900-73458126 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 69, 191

Conread position: 3-231
Cow position: chr1:74751434-74751665 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 168, 225

Conread position: 3-231
Cow position: chr1:74832622-74832391 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 103

Conread position: 3-231
Cow position: chr1:75383157-75382949 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 217, 57

Conread position: 3-231
Cow position: chr1:77620743-77620513 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 135, 118

Conread position: 3-231
Cow position: chr1:78092234-78092007 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 221, 0

Conread position: 3-231
Cow position: chr1:79844673-79844432 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 0

Conread position: 3-231
Cow position: chr1:81481191-81481415 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 217, 66

Conread position: 3-231
Cow position: chr1:86056884-86057102 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 65, 0

Conread position: 3-231
Cow position: chr1:92524211-92523979 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 0

Conread position: 3-231
Cow position: chr1:94226350-94226586 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 57, 183

Conread position: 3-231
Cow position: chr1:95101145-95100924 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 107, 54

Conread position: 3-231
Cow position: chr1:95828941-95829152 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 63, 19

Conread position: 3-231
Cow position: chr1:95835601-95835830 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 0

Conread position: 3-231
Cow position: chr1:101507544-101507327 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 174
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 214, 43

Conread position: 3-231
Cow position: chr1:102105931-102105697 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 166, 125

Conread position: 3-231
Cow position: chr1:102468428-102468647 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 0

Conread position: 3-231
Cow position: chr1:102529659-102529889 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 125

Conread position: 4-120
Cow position: chr1:6039184-6039297 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 4-122
Cow position: chr1:77704748-77704866 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 4-124
Cow position: chr1:72650368-72650489 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 4-129
Cow position: chr1:64139935-64139809 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 4-130
Cow position: chr1:66693708-66693831 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 4-133
Cow position: chr1:31725628-31725496 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 27, 87

Conread position: 4-141
Cow position: chr1:67743545-67743677 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 4-146
Cow position: chr1:1799225-1799084 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 4-158
Cow position: chr1:3130355-3130507 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 4-162
Cow position: chr1:709710-709862 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 53, 18

Conread position: 4-167
Cow position: chr1:61247560-61247397 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 4-168
Cow position: chr1:29971345-29971510 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 69, 110

Conread position: 4-168
Cow position: chr1:82862001-82861837 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-172
Cow position: chr1:4587678-4587850 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 4-174
Cow position: chr1:100741475-100741305 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 168

Conread position: 4-175
Cow position: chr1:362948-362776 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 13

Conread position: 4-177
Cow position: chr1:43296521-43296697 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 4-179
Cow position: chr1:74951415-74951591 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 4-181
Cow position: chr1:32217431-32217261 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 0

Conread position: 4-183
Cow position: chr1:76474366-76474540 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 4-185
Cow position: chr1:40181428-40181610 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 142, 0

Conread position: 4-185
Cow position: chr1:63905071-63905244 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 4-186
Cow position: chr1:38055313-38055487 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 4-186
Cow position: chr1:53540779-53540589 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 30

Conread position: 4-186
Cow position: chr1:84815328-84815143 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 88, 0

Conread position: 4-189
Cow position: chr1:81668619-81668806 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 80, 0

Conread position: 4-192
Cow position: chr1:69411502-69411690 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 156
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 33

Conread position: 4-193
Cow position: chr1:7306162-7305975 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 4-193
Cow position: chr1:50708346-50708157 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 4-194
Cow position: chr1:78793810-78793997 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 140, 58

Conread position: 4-194
Cow position: chr1:88391294-88391109 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 0

Conread position: 4-194
Cow position: chr1:96201122-96201310 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 109, 0

Conread position: 4-198
Cow position: chr1:102756242-102756431 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 4-199
Cow position: chr1:69691519-69691714 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 4-201
Cow position: chr1:78066350-78066538 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 4-201
Cow position: chr1:92792245-92792051 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 73, 18

Conread position: 4-201
Cow position: chr1:101714309-101714119 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 4-205
Cow position: chr1:100324565-100324754 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 4-207
Cow position: chr1:802119-802322 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 4-207
Cow position: chr1:54569894-54569689 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 186, 0

Conread position: 4-207
Cow position: chr1:56618463-56618657 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 4-207
Cow position: chr1:58754605-58754801 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 4-214
Cow position: chr1:38277833-38278042 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 4-214
Cow position: chr1:45019613-45019815 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 104, 53

Conread position: 4-215
Cow position: chr1:2075157-2075365 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 83, 0

Conread position: 4-215
Cow position: chr1:23968872-23969067 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 4-216
Cow position: chr1:4391075-4391295 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 141, 0

Conread position: 4-217
Cow position: chr1:18697766-18697552 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 79, 86

Conread position: 4-217
Cow position: chr1:72011629-72011830 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 4-217
Cow position: chr1:72813810-72813600 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 4-217
Cow position: chr1:91065964-91066168 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 56, 0

Conread position: 4-218
Cow position: chr1:61741771-61741985 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 74, 22

Conread position: 4-218
Cow position: chr1:102349566-102349764 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 4-219
Cow position: chr1:65639116-65638896 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 100

Conread position: 4-219
Cow position: chr1:78810073-78809856 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 77, 25

Conread position: 4-221
Cow position: chr1:34856432-34856649 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-221
Cow position: chr1:64113607-64113812 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 111, 56

Conread position: 4-222
Cow position: chr1:3923611-3923822 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 56, 0

Conread position: 4-222
Cow position: chr1:10633233-10633024 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 4-222
Cow position: chr1:25735061-25734846 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 84, 28

Conread position: 4-222
Cow position: chr1:59020862-59020640 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 67, 20

Conread position: 4-223
Cow position: chr1:90904564-90904779 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 77, 0

Conread position: 4-224
Cow position: chr1:73020469-73020687 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 18

Conread position: 4-225
Cow position: chr1:2972113-2971891 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 4-225
Cow position: chr1:5023543-5023787 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 4-225
Cow position: chr1:11729365-11729150 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 51

Conread position: 4-225
Cow position: chr1:24581759-24581554 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 201, 20

Conread position: 4-225
Cow position: chr1:41289586-41289802 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 101, 52

Conread position: 4-225
Cow position: chr1:87072887-87072674 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 4-225
Cow position: chr1:97717383-97717598 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 214, 56

Conread position: 4-225
Cow position: chr1:99629355-99629151 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 212, 71

Conread position: 4-226
Cow position: chr1:45223769-45223555 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 65, 0

Conread position: 4-227
Cow position: chr1:7175705-7175934 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 45

Conread position: 4-227
Cow position: chr1:62964461-62964239 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 4-228
Cow position: chr1:33409430-33409652 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 90, 0

Conread position: 4-230
Cow position: chr1:56477778-56477563 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 56, 0

Conread position: 4-231
Cow position: chr1:8811-8584 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-231
Cow position: chr1:724932-724706 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 28

Conread position: 4-231
Cow position: chr1:4243137-4243371 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 165, 0

Conread position: 4-231
Cow position: chr1:4701478-4701703 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 29

Conread position: 4-231
Cow position: chr1:5423540-5423769 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 152, 97

Conread position: 4-231
Cow position: chr1:5597019-5597241 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 138, 53

Conread position: 4-231
Cow position: chr1:6941659-6941430 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 170, 66

Conread position: 4-231
Cow position: chr1:6959072-6958843 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 176, 66

Conread position: 4-231
Cow position: chr1:46031154-46030925 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 74, 22

Conread position: 4-231
Cow position: chr1:47288437-47288210 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 69, 53

Conread position: 5-138
Cow position: chr1:71321811-71321938 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 5-147
Cow position: chr1:81611518-81611372 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 9, 73

Conread position: 5-152
Cow position: chr1:98505549-98505405 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 119

Conread position: 5-153
Cow position: chr1:78801784-78801932 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 5-160
Cow position: chr1:36625710-36625556 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 152, 0

Conread position: 5-164
Cow position: chr1:22628464-22628614 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 5-166
Cow position: chr1:26984204-26984043 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 5-168
Cow position: chr1:25956088-25955927 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 74, 0

Conread position: 5-168
Cow position: chr1:89146680-89146842 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 145, 0

Conread position: 5-173
Cow position: chr1:22394481-22394647 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 5-173
Cow position: chr1:31846190-31846027 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 5-173
Cow position: chr1:94712971-94713138 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 137
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 84, 0

Conread position: 5-179
Cow position: chr1:48301259-48301430 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 5-179
Cow position: chr1:70044536-70044374 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 5-181
Cow position: chr1:10155880-10156056 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-181
Cow position: chr1:47966828-47967004 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 5-181
Cow position: chr1:62469250-62469080 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 5-181
Cow position: chr1:98415785-98415606 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 5-185
Cow position: chr1:65030262-65030082 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 5-187
Cow position: chr1:70416568-70416747 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 149
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 0

Conread position: 5-189
Cow position: chr1:21573734-21573551 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 5-189
Cow position: chr1:98556926-98557108 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 72, 0

Conread position: 5-189
Cow position: chr1:99637059-99637243 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 5-192
Cow position: chr1:13828395-13828578 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 71, 17

Conread position: 5-192
Cow position: chr1:49297843-49297659 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 76, 0

Conread position: 5-193
Cow position: chr1:35143793-35143974 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 5-194
Cow position: chr1:83004857-83004659 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 68, 166

Conread position: 5-199
Cow position: chr1:101788905-101789088 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 5-202
Cow position: chr1:93590398-93590588 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 5-206
Cow position: chr1:81568837-81569034 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 76, 0

Conread position: 5-207
Cow position: chr1:14567450-14567642 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 5-208
Cow position: chr1:101280545-101280742 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 5-211
Cow position: chr1:24132871-24133071 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 65, 0

Conread position: 5-217
Cow position: chr1:10953076-10952865 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 189, 84

Conread position: 5-218
Cow position: chr1:10617083-10616865 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 169, 140

Conread position: 5-218
Cow position: chr1:98467994-98467786 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 34, 153

Conread position: 5-218
Cow position: chr1:101837247-101837024 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 5-219
Cow position: chr1:25383861-25383650 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 76, 0

Conread position: 5-221
Cow position: chr1:100422012-100421804 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 5-222
Cow position: chr1:23186610-23186820 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 55, 0

Conread position: 5-222
Cow position: chr1:24542378-24542591 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 90, 55

Conread position: 5-222
Cow position: chr1:75250304-75250093 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 5-222
Cow position: chr1:81228144-81228356 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 14

Conread position: 5-222
Cow position: chr1:82936413-82936619 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 5-222
Cow position: chr1:87095019-87095236 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-222
Cow position: chr1:92684489-92684717 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 5-224
Cow position: chr1:19515425-19515644 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 37

Conread position: 5-225
Cow position: chr1:20125987-20125772 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 71, 113

Conread position: 5-225
Cow position: chr1:41027264-41027048 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 211, 66

Conread position: 5-225
Cow position: chr1:57297700-57297457 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 104

Conread position: 5-225
Cow position: chr1:71078770-71078984 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 5-225
Cow position: chr1:81391114-81390897 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 113

Conread position: 5-225
Cow position: chr1:84811749-84811964 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 73, 0

Conread position: 5-225
Cow position: chr1:86113204-86113424 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 79, 198

Conread position: 5-226
Cow position: chr1:8287438-8287656 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 5-226
Cow position: chr1:46143275-46143487 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 24, 56

Conread position: 5-226
Cow position: chr1:48206348-48206559 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 209, 17

Conread position: 5-227
Cow position: chr1:50432289-50432517 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 181, 0

Conread position: 5-227
Cow position: chr1:90975884-90976115 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 106

Conread position: 5-227
Cow position: chr1:99221150-99221380 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 17

Conread position: 5-228
Cow position: chr1:102768367-102768153 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 200, 17

Conread position: 5-229
Cow position: chr1:100474431-100474202 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 5-231
Cow position: chr1:484271-484498 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 5-231
Cow position: chr1:5776338-5776107 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 185, 0

Conread position: 5-231
Cow position: chr1:6102708-6102940 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 170, 0

Conread position: 5-231
Cow position: chr1:15547657-15547440 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 215, 57

Conread position: 5-231
Cow position: chr1:29626718-29626945 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 218, 111

Conread position: 5-231
Cow position: chr1:31794814-31795036 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 152, 0

Conread position: 5-231
Cow position: chr1:55428761-55428991 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 0

Conread position: 5-231
Cow position: chr1:82337588-82337807 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 13, 58

Conread position: 5-231
Cow position: chr1:96964511-96964287 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 172, 0

Conread position: 5-231
Cow position: chr1:97144279-97144495 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 142, 55

Conread position: 5-231
Cow position: chr1:100552158-100551938 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 155, 55

Conread position: 5-231
Cow position: chr1:101177714-101177484 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 71, 130

Conread position: 5-231
Cow position: chr1:102754043-102753821 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 176, 54

Conread position: 6-134
Cow position: chr1:50642878-50643004 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 6-168
Cow position: chr1:90879549-90879704 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 6-175
Cow position: chr1:1802361-1802192 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 139
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 6-176
Cow position: chr1:11887660-11887837 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 6-176
Cow position: chr1:23373052-23372883 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 140
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 80, 0

Conread position: 6-179
Cow position: chr1:53402975-53402802 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 146
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-187
Cow position: chr1:77460872-77460691 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 100

Conread position: 6-187
Cow position: chr1:102500922-102501103 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 70, 102

Conread position: 6-190
Cow position: chr1:52369990-52370161 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 6-193
Cow position: chr1:101692066-101691887 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 6-218
Cow position: chr1:5876272-5876476 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 0

Conread position: 6-218
Cow position: chr1:42256314-42256520 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 6-218
Cow position: chr1:92996695-92996909 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 70, 91

Conread position: 6-221
Cow position: chr1:46245545-46245770 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 119

Conread position: 6-221
Cow position: chr1:56225973-56225764 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 0

Conread position: 6-222
Cow position: chr1:22943837-22944046 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 60, 0

Conread position: 6-222
Cow position: chr1:43388863-43389069 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 6-224
Cow position: chr1:43311576-43311796 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 6-226
Cow position: chr1:6867271-6867491 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 6-226
Cow position: chr1:57089487-57089705 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 6-226
Cow position: chr1:61391604-61391810 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 6-231
Cow position: chr1:6228390-6228614 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 89

Conread position: 6-231
Cow position: chr1:33775448-33775673 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 70, 16

Conread position: 6-231
Cow position: chr1:38419217-38418995 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 16

Conread position: 6-231
Cow position: chr1:71789957-71790181 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 212, 42

Conread position: 6-231
Cow position: chr1:96081669-96081449 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 6-231
Cow position: chr1:99609558-99609337 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 179
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 213, 55

Conread position: 7-141
Cow position: chr1:716395-716528 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 7-174
Cow position: chr1:90820290-90820451 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 7-175
Cow position: chr1:69378408-69378574 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 7-185
Cow position: chr1:4573915-4573739 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 87, 0

Conread position: 7-211
Cow position: chr1:89509738-89509932 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 7-221
Cow position: chr1:20950907-20950695 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 183, 0

Conread position: 7-222
Cow position: chr1:500366-500153 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 7-222
Cow position: chr1:5636882-5637081 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 135, 51

Conread position: 7-222
Cow position: chr1:51417954-51417751 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 7-222
Cow position: chr1:96272827-96273044 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 110

Conread position: 7-227
Cow position: chr1:21093309-21093089 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 93

Conread position: 7-227
Cow position: chr1:101822314-101822531 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 94

Conread position: 8-173
Cow position: chr1:37543597-37543759 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 27

Conread position: 8-184
Cow position: chr1:83682982-83683155 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 8-210
Cow position: chr1:21954038-21954232 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 200, 51

Conread position: 8-213
Cow position: chr1:31256041-31256235 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 61

Conread position: 8-220
Cow position: chr1:242741-242537 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 169
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 0

Conread position: 8-221
Cow position: chr1:93528883-93528678 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 133, 52

Conread position: 8-228
Cow position: chr1:2975800-2976023 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 80, 195

Conread position: 8-229
Cow position: chr1:22730922-22730705 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 8-231
Cow position: chr1:49433071-49433294 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 217

Conread position: 8-231
Cow position: chr1:68845317-68845519 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 208, 52

Conread position: 8-231
Cow position: chr1:99642180-99642397 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 10-218
Cow position: chr1:70025179-70025386 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 155, 0

Conread position: 10-225
Cow position: chr1:96304785-96304994 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 167
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 63, 0

Conread position: 10-231
Cow position: chr1:69227262-69227471 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 11-140
Cow position: chr1:93744032-93743899 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 11-159
Cow position: chr1:72069917-72070073 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 11-169
Cow position: chr1:12141108-12141266 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-170
Cow position: chr1:76909852-76909699 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 11-179
Cow position: chr1:11629190-11629357 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 11-195
Cow position: chr1:31630097-31630282 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 0

Conread position: 11-196
Cow position: chr1:60367198-60367383 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 11-203
Cow position: chr1:62997987-62997796 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 67, 153

Conread position: 11-207
Cow position: chr1:52619016-52618822 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 11-214
Cow position: chr1:1499504-1499707 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 11-217
Cow position: chr1:69940638-69940840 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 95, 49

Conread position: 11-218
Cow position: chr1:10880893-10881100 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 107, 78

Conread position: 11-218
Cow position: chr1:85867786-85867571 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 11-218
Cow position: chr1:91861111-91861317 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 163, 0

Conread position: 11-222
Cow position: chr1:91649229-91649440 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 193, 138

Conread position: 11-224
Cow position: chr1:89157944-89158151 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 208, 45

Conread position: 11-225
Cow position: chr1:1053768-1053555 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 209, 124

Conread position: 11-226
Cow position: chr1:18152649-18152434 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 11-226
Cow position: chr1:72068645-72068861 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 11-226
Cow position: chr1:84905874-84906089 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 11-226
Cow position: chr1:85580818-85580603 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 11-226
Cow position: chr1:91816582-91816797 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 11-227
Cow position: chr1:64302064-64302271 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 122, 15

Conread position: 11-229
Cow position: chr1:75411650-75411868 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 11-231
Cow position: chr1:51609564-51609341 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 194, 17

Conread position: 11-231
Cow position: chr1:63595865-63596084 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 194, 202

Conread position: 12-157
Cow position: chr1:76222534-76222681 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 122, 0

Conread position: 12-189
Cow position: chr1:98090597-98090779 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 47, 79

Conread position: 12-194
Cow position: chr1:34731232-34731052 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 173, 0

Conread position: 12-215
Cow position: chr1:86687976-86688171 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 12-218
Cow position: chr1:49980893-49980692 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 12-221
Cow position: chr1:13547795-13548006 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 145, 62

Conread position: 12-222
Cow position: chr1:82374866-82374651 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 155

Conread position: 12-225
Cow position: chr1:648513-648300 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 12-227
Cow position: chr1:6826107-6826324 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 64, 27

Conread position: 12-231
Cow position: chr1:61005375-61005593 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 133, 0

Conread position: 13-132
Cow position: chr1:7962848-7962730 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 13-147
Cow position: chr1:3749396-3749528 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 13-206
Cow position: chr1:11832590-11832785 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 13-218
Cow position: chr1:26201419-26201218 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 147, 0

Conread position: 13-221
Cow position: chr1:42968132-42968340 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 192, 200

Conread position: 13-222
Cow position: chr1:63992148-63992358 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 54, 78

Conread position: 13-228
Cow position: chr1:78097110-78096897 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 207, 65

Conread position: 14-172
Cow position: chr1:3154844-3155006 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 14-177
Cow position: chr1:81471534-81471378 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 136
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 14-217
Cow position: chr1:45007650-45007447 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 31

Conread position: 15-218
Cow position: chr1:100753710-100753511 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 143, 0

Conread position: 15-231
Cow position: chr1:91811964-91811750 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 73, 157

Conread position: 17-159
Cow position: chr1:96482852-96482705 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 27, 80

Conread position: 17-162
Cow position: chr1:42797059-42796915 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 17-188
Cow position: chr1:56109422-56109593 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 17-188
Cow position: chr1:73534459-73534629 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 76, 0

Conread position: 17-203
Cow position: chr1:1495297-1495112 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 17-207
Cow position: chr1:150743-150932 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 17-207
Cow position: chr1:51628328-51628514 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 99, 145

Conread position: 17-207
Cow position: chr1:72104034-72103843 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 17-210
Cow position: chr1:22461059-22461248 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 155
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 50, 0

Conread position: 17-216
Cow position: chr1:90864111-90864309 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 17-217
Cow position: chr1:46035768-46035968 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 17-218
Cow position: chr1:68217183-68217379 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 17-218
Cow position: chr1:96019411-96019212 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 17-225
Cow position: chr1:6294314-6294525 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 116, 0

Conread position: 17-225
Cow position: chr1:29452103-29451896 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 17-225
Cow position: chr1:60667831-60668025 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 17-225
Cow position: chr1:75209325-75209116 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 66, 83

Conread position: 17-230
Cow position: chr1:70297462-70297248 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 17-231
Cow position: chr1:65066526-65066750 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 203

Conread position: 18-225
Cow position: chr1:3419986-3419779 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 202, 64

Conread position: 19-179
Cow position: chr1:55296990-55297150 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 19-188
Cow position: chr1:69532348-69532511 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 19-218
Cow position: chr1:50461602-50461800 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 159, 0

Conread position: 19-219
Cow position: chr1:2122389-2122589 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 19-220
Cow position: chr1:13637487-13637683 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 21-231
Cow position: chr1:8347301-8347092 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 30, 0

Conread position: 21-231
Cow position: chr1:98512117-98511896 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 55, 97

Conread position: 22-130
Cow position: chr1:84925767-84925659 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 22-154
Cow position: chr1:49024468-49024335 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 22-165
Cow position: chr1:3666853-3666996 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 122
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 22-176
Cow position: chr1:8476079-8475925 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 22-183
Cow position: chr1:70146733-70146894 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 22-189
Cow position: chr1:81179172-81179337 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 102, 13

Conread position: 22-194
Cow position: chr1:100812122-100812285 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 81, 32

Conread position: 22-201
Cow position: chr1:88926204-88926382 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 160, 0

Conread position: 22-207
Cow position: chr1:51435957-51435772 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 22-207
Cow position: chr1:86483082-86482897 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 22-207
Cow position: chr1:87083807-87083622 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 22-208
Cow position: chr1:89158530-89158706 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 183, 38

Conread position: 22-218
Cow position: chr1:44946927-44946738 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 22-218
Cow position: chr1:49334214-49334410 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 161
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 72, 54

Conread position: 22-218
Cow position: chr1:87197995-87197802 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 46, 0

Conread position: 22-222
Cow position: chr1:86579147-86578943 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 49, 144

Conread position: 22-224
Cow position: chr1:98413954-98413747 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 159
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 22-225
Cow position: chr1:30862237-30862434 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 57, 127

Conread position: 22-225
Cow position: chr1:52673998-52674201 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 22-231
Cow position: chr1:679430-679635 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 140
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 23-154
Cow position: chr1:31807037-31806907 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 64

Conread position: 23-155
Cow position: chr1:18764446-18764576 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 23-189
Cow position: chr1:73494417-73494585 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 23-194
Cow position: chr1:52450940-52450777 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 23-224
Cow position: chr1:52496947-52496748 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 0

Conread position: 23-225
Cow position: chr1:31348261-31348464 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 196, 49

Conread position: 24-213
Cow position: chr1:10674326-10674138 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 128, 27

Conread position: 24-218
Cow position: chr1:867980-867786 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 141, 176

Conread position: 24-218
Cow position: chr1:75189964-75189767 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 108

Conread position: 24-218
Cow position: chr1:84283249-84283056 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 178, 0

Conread position: 24-220
Cow position: chr1:2462549-2462363 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 24-221
Cow position: chr1:53370259-53370064 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 24-222
Cow position: chr1:1956161-1956355 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 90, 52

Conread position: 24-222
Cow position: chr1:31607713-31607910 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 136, 0

Conread position: 24-231
Cow position: chr1:68618762-68618964 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 145, 36

Conread position: 26-219
Cow position: chr1:76019526-76019712 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 26-220
Cow position: chr1:96183812-96184009 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 142, 50

Conread position: 27-196
Cow position: chr1:4512149-4511987 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 27-227
Cow position: chr1:48581300-48581102 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 54, 0

Conread position: 27-231
Cow position: chr1:15206704-15206903 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 162
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 75, 0

Conread position: 29-148
Cow position: chr1:59675771-59675655 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 29-150
Cow position: chr1:54645600-54645477 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 29-157
Cow position: chr1:50843680-50843809 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 29-162
Cow position: chr1:91810913-91810784 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 29-165
Cow position: chr1:61636599-61636734 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 29-175
Cow position: chr1:82917306-82917450 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 29-176
Cow position: chr1:93385244-93385099 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 29-180
Cow position: chr1:82505170-82505025 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 70

Conread position: 29-222
Cow position: chr1:11913707-11913901 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 69, 8

Conread position: 29-225
Cow position: chr1:83606279-83606483 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 29-228
Cow position: chr1:96599127-96599317 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 29-229
Cow position: chr1:24534093-24534283 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 29-231
Cow position: chr1:53521082-53520880 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 164
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 85, 33

Conread position: 29-231
Cow position: chr1:69694830-69695023 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 148, 34

Conread position: 29-231
Cow position: chr1:89786080-89785879 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 170, 131

Conread position: 30-162
Cow position: chr1:40160547-40160677 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 30-200
Cow position: chr1:87220618-87220460 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 30-218
Cow position: chr1:186105-186292 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 26, 115

Conread position: 30-222
Cow position: chr1:53458865-53458676 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 17

Conread position: 30-228
Cow position: chr1:50963960-50964158 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 30-231
Cow position: chr1:635364-635161 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 190, 0

Conread position: 30-231
Cow position: chr1:42868779-42868969 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 166
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 196, 9

Conread position: 31-188
Cow position: chr1:12090513-12090362 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 117, 0

Conread position: 31-222
Cow position: chr1:95153390-95153201 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 32-174
Cow position: chr1:31672827-31672971 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 32-226
Cow position: chr1:52487813-52488006 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 32-231
Cow position: chr1:8670943-8670740 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 44, 19

Conread position: 36-224
Cow position: chr1:92516830-92517019 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 169, 0

Conread position: 36-231
Cow position: chr1:52039794-52039605 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 183, 33

Conread position: 37-222
Cow position: chr1:3965996-3965814 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 24

Conread position: 37-226
Cow position: chr1:81613553-81613361 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 42, 25

Conread position: 37-231
Cow position: chr1:51770255-51770056 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 138, 0

Conread position: 37-231
Cow position: chr1:54625094-54624897 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 151, 0

Conread position: 38-225
Cow position: chr1:51531913-51531728 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 18, 33

Conread position: 39-194
Cow position: chr1:67539720-67539564 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 132
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 130, 118

Conread position: 40-224
Cow position: chr1:40530944-40531124 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 40-231
Cow position: chr1:9143876-9143691 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 42-225
Cow position: chr1:32001167-32001338 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 153
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 0

Conread position: 44-231
Cow position: chr1:74822607-74822416 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 22

Conread position: 45-218
Cow position: chr1:42873796-42873970 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 7

Conread position: 46-215
Cow position: chr1:24561355-24561524 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 46-215
Cow position: chr1:24570793-24570962 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 46-217
Cow position: chr1:95035199-95035366 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 47-158
Cow position: chr1:30194703-30194592 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 47-187
Cow position: chr1:22467432-22467572 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 85

Conread position: 47-222
Cow position: chr1:7971566-7971389 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 5

Conread position: 48-221
Cow position: chr1:89341832-89342007 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 137, 21

Conread position: 49-188
Cow position: chr1:90817143-90817003 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 49-189
Cow position: chr1:1242032-1242166 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 50-227
Cow position: chr1:6964929-6965113 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 68

Conread position: 51-225
Cow position: chr1:77880582-77880755 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 113

Conread position: 52-227
Cow position: chr1:78697623-78697798 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 5, 13

Conread position: 54-192
Cow position: chr1:44835641-44835784 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 23

Conread position: 54-216
Cow position: chr1:3417503-3417332 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 55-169
Cow position: chr1:69179669-69179552 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 55-176
Cow position: chr1:52506027-52506148 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 55-221
Cow position: chr1:43311889-43312052 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 55-231
Cow position: chr1:50992075-50991902 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 55-231
Cow position: chr1:58037161-58036987 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 144
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 165, 30

Conread position: 56-192
Cow position: chr1:95388613-95388475 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 56-225
Cow position: chr1:4032776-4032607 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 145
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 56-226
Cow position: chr1:100569300-100569129 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 149, 0

Conread position: 57-203
Cow position: chr1:92603162-92603016 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 124
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 57-221
Cow position: chr1:36875169-36875009 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 58-211
Cow position: chr1:64019379-64019532 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 58-222
Cow position: chr1:54157436-54157272 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 125, 19

Conread position: 59-222
Cow position: chr1:5539135-5539299 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 146, 0

Conread position: 59-224
Cow position: chr1:73936003-73936169 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 60-191
Cow position: chr1:42822412-42822280 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 60-199
Cow position: chr1:49822364-49822499 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 60-215
Cow position: chr1:31272305-31272457 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 60-221
Cow position: chr1:3914779-3914939 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 106, 0

Conread position: 60-231
Cow position: chr1:39068816-39068987 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 60-231
Cow position: chr1:48769941-48769771 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 60-231
Cow position: chr1:98461424-98461255 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 62-189
Cow position: chr1:576364-576240 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 62-192
Cow position: chr1:49299800-49299666 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 62-192
Cow position: chr1:94874444-94874316 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 62-193
Cow position: chr1:57359600-57359471 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 115, 0

Conread position: 62-194
Cow position: chr1:28985428-28985566 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 62-197
Cow position: chr1:53640850-53640718 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 62-216
Cow position: chr1:56711465-56711615 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 104, 0

Conread position: 62-218
Cow position: chr1:57420598-57420749 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 62-219
Cow position: chr1:26615941-26616095 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 126, 27

Conread position: 62-221
Cow position: chr1:24791808-24791967 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 62-221
Cow position: chr1:45670770-45670614 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 62-222
Cow position: chr1:80422408-80422253 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 149, 15

Conread position: 62-224
Cow position: chr1:93554974-93554811 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 158, 0

Conread position: 62-225
Cow position: chr1:53308256-53308414 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 62-225
Cow position: chr1:71253420-71253579 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 158, 13

Conread position: 62-229
Cow position: chr1:45478725-45478888 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 62-229
Cow position: chr1:89741855-89742029 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 141
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 62-230
Cow position: chr1:26894834-26895008 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 62-231
Cow position: chr1:71643522-71643694 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 62-231
Cow position: chr1:85549940-85550109 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 63-173
Cow position: chr1:76080943-76080834 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 7, 72

Conread position: 63-176
Cow position: chr1:61245176-61245293 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 63-183
Cow position: chr1:99024094-99024214 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 63-189
Cow position: chr1:46100705-46100829 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 113
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 63-195
Cow position: chr1:65909645-65909516 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 63-206
Cow position: chr1:85236458-85236309 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 63-207
Cow position: chr1:97750482-97750626 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 31

Conread position: 63-215
Cow position: chr1:19304707-19304556 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 130
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 150, 78

Conread position: 63-215
Cow position: chr1:45873933-45874093 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 101, 0

Conread position: 63-216
Cow position: chr1:98551856-98551704 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 63-217
Cow position: chr1:21461006-21460859 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 63-217
Cow position: chr1:52995163-52995007 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 63-218
Cow position: chr1:47233341-47233496 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 63-218
Cow position: chr1:67918894-67918739 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 63-218
Cow position: chr1:81580314-81580160 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 89, 0

Conread position: 63-221
Cow position: chr1:33996787-33996945 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 63-221
Cow position: chr1:68127052-68127211 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 63-222
Cow position: chr1:28470969-28470804 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 63-222
Cow position: chr1:68672465-68672619 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 63-223
Cow position: chr1:84010904-84010749 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 59, 0

Conread position: 63-224
Cow position: chr1:98576184-98576022 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 137
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 156, 149

Conread position: 63-227
Cow position: chr1:65881942-65881781 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 63-227
Cow position: chr1:84203648-84203487 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 136
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 63-227
Cow position: chr1:97939096-97938934 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 139

Conread position: 63-231
Cow position: chr1:34300414-34300583 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 157, 0

Conread position: 63-231
Cow position: chr1:48730694-48730860 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 13, 116

Conread position: 63-231
Cow position: chr1:77892271-77892108 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 64-173
Cow position: chr1:13752311-13752420 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 64-178
Cow position: chr1:98814669-98814779 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 64-189
Cow position: chr1:45673890-45673765 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 108
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 64-194
Cow position: chr1:64706629-64706499 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 8, 72

Conread position: 64-206
Cow position: chr1:69445468-69445323 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 39, 29

Conread position: 64-218
Cow position: chr1:74928020-74927866 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 130
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 64-221
Cow position: chr1:20864189-20864036 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 64-222
Cow position: chr1:47402665-47402506 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 8, 60

Conread position: 64-222
Cow position: chr1:71796177-71796332 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 13

Conread position: 64-227
Cow position: chr1:93044153-93043993 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 153, 112

Conread position: 64-228
Cow position: chr1:86073732-86073567 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 156, 0

Conread position: 64-230
Cow position: chr1:19885517-19885353 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 156, 96

Conread position: 64-231
Cow position: chr1:71915984-71916152 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 156, 112

Conread position: 65-166
Cow position: chr1:3955142-3955243 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 65-181
Cow position: chr1:51371683-51371800 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 65-191
Cow position: chr1:81452488-81452362 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 49, 53

Conread position: 65-193
Cow position: chr1:8353514-8353386 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 65-193
Cow position: chr1:77954167-77954290 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 65-207
Cow position: chr1:84255902-84255760 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 65-218
Cow position: chr1:80336113-80336267 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 129
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 65-231
Cow position: chr1:4027998-4027835 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 113, 73

Conread position: 65-231
Cow position: chr1:23512524-23512690 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 14, 54

Conread position: 65-231
Cow position: chr1:92989725-92989558 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 155, 0

Conread position: 66-221
Cow position: chr1:95974535-95974379 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 67-202
Cow position: chr1:82877319-82877183 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 67-225
Cow position: chr1:73960833-73960678 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 69-184
Cow position: chr1:1875518-1875404 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 69-200
Cow position: chr1:49839615-49839485 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 69-217
Cow position: chr1:81913024-81913168 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 69-217
Cow position: chr1:97696875-97696730 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 69-218
Cow position: chr1:97090458-97090308 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 69-226
Cow position: chr1:91874786-91874938 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 69-231
Cow position: chr1:67688452-67688613 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 70-225
Cow position: chr1:42360418-42360261 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 131
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 56, 0

Conread position: 71-225
Cow position: chr1:56832650-56832800 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 15, 56

Conread position: 72-193
Cow position: chr1:4027563-4027441 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 73-194
Cow position: chr1:45283319-45283200 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 73-222
Cow position: chr1:1165725-1165577 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 54

Conread position: 73-224
Cow position: chr1:42178872-42178715 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 131
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 131, 0

Conread position: 73-224
Cow position: chr1:54289064-54289216 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 52

Conread position: 73-226
Cow position: chr1:4581204-4581358 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 145, 17

Conread position: 73-228
Cow position: chr1:38205602-38205446 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 73-231
Cow position: chr1:68676489-68676330 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 113

Conread position: 77-189
Cow position: chr1:3776212-3776324 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 77-215
Cow position: chr1:95516162-95516024 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 77-230
Cow position: chr1:20732827-20732673 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 142, 25

Conread position: 77-230
Cow position: chr1:81809016-81809169 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 142, 101

Conread position: 78-175
Cow position: chr1:10635486-10635389 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 78-187
Cow position: chr1:32477417-32477526 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 78-187
Cow position: chr1:32787832-32787941 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 46, 78

Conread position: 78-189
Cow position: chr1:84288525-84288414 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 78-203
Cow position: chr1:26912667-26912790 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 78-213
Cow position: chr1:59147223-59147356 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 69

Conread position: 78-215
Cow position: chr1:39417993-39418126 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 78-216
Cow position: chr1:7908159-7908021 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 78-217
Cow position: chr1:52052595-52052734 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 78-221
Cow position: chr1:24406775-24406918 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 78-222
Cow position: chr1:69481828-69481970 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 78-222
Cow position: chr1:76436602-76436458 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 78-222
Cow position: chr1:98594687-98594551 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 78-230
Cow position: chr1:41252288-41252436 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 106, 88

Conread position: 78-230
Cow position: chr1:84768757-84768910 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 130
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 142, 0

Conread position: 78-231
Cow position: chr1:8349202-8349348 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 87

Conread position: 78-231
Cow position: chr1:30417926-30418072 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 78-231
Cow position: chr1:39509936-39510088 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 134, 0

Conread position: 78-231
Cow position: chr1:87937019-87936867 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 78-231
Cow position: chr1:102504693-102504544 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 142, 99

Conread position: 79-175
Cow position: chr1:68245199-68245294 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 79-193
Cow position: chr1:35165326-35165212 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 79-222
Cow position: chr1:4291285-4291144 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 80

Conread position: 79-222
Cow position: chr1:42138979-42138836 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 79-222
Cow position: chr1:81629729-81629870 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 80-218
Cow position: chr1:235642-235775 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 80-231
Cow position: chr1:3352580-3352729 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 80-231
Cow position: chr1:6972646-6972498 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 125, 0

Conread position: 81-194
Cow position: chr1:61513202-61513314 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 81-198
Cow position: chr1:60940-60821 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 81-208
Cow position: chr1:85029073-85028945 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 81-210
Cow position: chr1:83301831-83301962 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 81-217
Cow position: chr1:19466170-19466036 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 81-218
Cow position: chr1:21823481-21823344 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 81-218
Cow position: chr1:98360285-98360414 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 81-222
Cow position: chr1:100706245-100706109 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 81-229
Cow position: chr1:42537203-42537353 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 37

Conread position: 81-231
Cow position: chr1:27881726-27881578 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 139, 78

Conread position: 82-211
Cow position: chr1:5135591-5135720 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 118

Conread position: 82-216
Cow position: chr1:42545661-42545795 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 82-216
Cow position: chr1:72141690-72141561 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 82-227
Cow position: chr1:31390470-31390615 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 73, 135

Conread position: 82-231
Cow position: chr1:81582232-81582083 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 15

Conread position: 83-194
Cow position: chr1:55194129-55194240 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 83-221
Cow position: chr1:30047486-30047618 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 83-228
Cow position: chr1:74081864-74082010 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 122
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 138, 0

Conread position: 83-231
Cow position: chr1:53425294-53425145 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 83-231
Cow position: chr1:93810546-93810398 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 83-231
Cow position: chr1:101632220-101632370 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 124
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 137, 0

Conread position: 84-213
Cow position: chr1:98683989-98683861 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 84-219
Cow position: chr1:66430407-66430274 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 84-222
Cow position: chr1:43822515-43822381 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 84-222
Cow position: chr1:72285952-72286090 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 84-231
Cow position: chr1:30504617-30504470 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 85-228
Cow position: chr1:95215075-95215217 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 139, 0

Conread position: 85-231
Cow position: chr1:37309404-37309550 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 86-230
Cow position: chr1:61542805-61542948 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 123
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 75, 0

Conread position: 87-196
Cow position: chr1:6989263-6989154 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 87-227
Cow position: chr1:60281486-60281346 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 88-221
Cow position: chr1:54732375-54732506 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 89-210
Cow position: chr1:52429549-52429670 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 90-215
Cow position: chr1:77683462-77683337 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 109
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 90-218
Cow position: chr1:88111981-88111857 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 90-221
Cow position: chr1:89350075-89349944 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 92-222
Cow position: chr1:96583484-96583620 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 93-222
Cow position: chr1:81355596-81355727 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 93-231
Cow position: chr1:75142104-75141966 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 94-222
Cow position: chr1:102345929-102346058 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 65

Conread position: 96-223
Cow position: chr1:77265537-77265414 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 96-229
Cow position: chr1:102296446-102296314 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 103-218
Cow position: chr1:89485677-89485561 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 109-231
Cow position: chr1:4374246-4374371 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 111-225
Cow position: chr1:85597027-85596919 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 116-222
Cow position: chr1:6788199-6788305 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 117-222
Cow position: chr1:12082931-12082825 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 128-222
Cow position: chr1:101946642-101946736 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 128-231
Cow position: chr1:102647201-102647305 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 92, 0

Show alignments to all cow chromosomes.