Cow genome map

Conread name: ramn3524b_e9.y1

Conread position: 1-119
Cow position: chr11:67417983-67417866 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 1-137
Cow position: chr11:80695067-80695203 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-149
Cow position: chr11:64126386-64126238 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr11:43641562-43641408 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 128
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position: chr11:46010085-46010232 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 1-163
Cow position: chr11:82725354-82725187 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 1-172
Cow position: chr11:26343276-26343106 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 75, 0

Conread position: 1-177
Cow position: chr11:30654822-30654655 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 1-181
Cow position: chr11:2836034-2835854 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 148
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 1-182
Cow position: chr11:21173263-21173443 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 148
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 0

Conread position: 1-185
Cow position: chr11:5176207-5176388 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 168, 73

Conread position: 1-189
Cow position: chr11:12080017-12079824 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 72, 0

Conread position: 1-201
Cow position: chr11:4221491-4221294 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 130, 110

Conread position: 1-201
Cow position: chr11:47755206-47755410 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 178

Conread position: 1-207
Cow position: chr11:9237674-9237877 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 1-207
Cow position: chr11:69016151-69015945 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 78, 71

Conread position: 1-210
Cow position: chr11:5467255-5467038 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 174, 56

Conread position: 1-211
Cow position: chr11:77319586-77319380 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 80, 0

Conread position: 1-216
Cow position: chr11:32595633-32595418 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-217
Cow position: chr11:14875594-14875816 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 167, 0

Conread position: 1-221
Cow position: chr11:2917419-2917630 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 70, 0

Conread position: 1-221
Cow position: chr11:50472492-50472273 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 0

Conread position: 1-221
Cow position: chr11:62889718-62889938 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-222
Cow position: chr11:36182865-36182645 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 156, 36

Conread position: 1-222
Cow position: chr11:60301803-60302006 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 1-222
Cow position: chr11:84228549-84228761 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 199, 66

Conread position: 1-225
Cow position: chr11:44017158-44016926 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 56, 0

Conread position: 1-225
Cow position: chr11:55636051-55636274 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 125, 0

Conread position: 1-226
Cow position: chr11:29677381-29677153 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 80

Conread position: 1-228
Cow position: chr11:48660104-48659884 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 19

Conread position: 1-230
Cow position: chr11:3740138-3739900 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 1-231
Cow position: chr11:35926735-35926962 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 27

Conread position: 1-231
Cow position: chr11:68883894-68883664 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 2-139
Cow position: chr11:2830829-2830694 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 2-142
Cow position: chr11:8828183-8828040 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 71, 83

Conread position: 2-142
Cow position: chr11:24551564-24551425 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 120
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 96, 125

Conread position: 2-142
Cow position: chr11:32817643-32817782 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 2-143
Cow position: chr11:27413637-27413782 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 2-146
Cow position: chr11:65431690-65431549 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 2-152
Cow position: chr11:75915159-75915018 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 2-156
Cow position: chr11:71303752-71303599 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 2-157
Cow position: chr11:69421532-69421693 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 142

Conread position: 2-158
Cow position: chr11:83028165-83028012 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 33

Conread position: 2-162
Cow position: chr11:33369325-33369165 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 138
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 2-163
Cow position: chr11:59471277-59471115 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 2-165
Cow position: chr11:30485830-30485663 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 2-166
Cow position: chr11:68570208-68570370 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 2-169
Cow position: chr11:49486962-49486786 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 0

Conread position: 2-173
Cow position: chr11:42786509-42786684 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 158

Conread position: 2-174
Cow position: chr11:33374139-33373968 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 2-174
Cow position: chr11:81065877-81066047 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 2-175
Cow position: chr11:40538722-40538552 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 142, 66

Conread position: 2-175
Cow position: chr11:44620126-44619956 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 0

Conread position: 2-176
Cow position: chr11:36065826-36066008 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 2-176
Cow position: chr11:36976547-36976374 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 143, 0

Conread position: 2-176
Cow position: chr11:47950792-47950617 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 2-179
Cow position: chr11:42065825-42065647 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 2-179
Cow position: chr11:66041445-66041276 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 149
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 66, 0

Conread position: 2-180
Cow position: chr11:23220533-23220358 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 176, 42

Conread position: 2-180
Cow position: chr11:75749638-75749476 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 2-181
Cow position: chr11:60720281-60720460 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-182
Cow position: chr11:25135106-25135292 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 2-183
Cow position: chr11:19578849-19579022 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 2-187
Cow position: chr11:17074055-17074229 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 58

Conread position: 2-187
Cow position: chr11:19549649-19549474 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 0

Conread position: 2-187
Cow position: chr11:47110429-47110242 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 58, 170

Conread position: 2-188
Cow position: chr11:47412015-47411830 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 153
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 171, 177

Conread position: 2-192
Cow position: chr11:10876452-10876263 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 2-193
Cow position: chr11:70517405-70517610 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 60, 22

Conread position: 2-197
Cow position: chr11:46884548-46884353 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-198
Cow position: chr11:80586439-80586252 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 192, 58

Conread position: 2-202
Cow position: chr11:5454521-5454727 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 174, 0

Conread position: 2-203
Cow position: chr11:63165478-63165673 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 2-207
Cow position: chr11:42159889-42160084 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 2-207
Cow position: chr11:67615079-67615276 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 2-207
Cow position: chr11:67931318-67931515 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 145, 0

Conread position: 2-208
Cow position: chr11:63382024-63382222 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 2-208
Cow position: chr11:65495171-65495367 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 2-214
Cow position: chr11:21590561-21590344 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 199

Conread position: 2-215
Cow position: chr11:73983817-73984042 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 2-217
Cow position: chr11:36521053-36520834 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 131, 75

Conread position: 2-217
Cow position: chr11:53773856-53773641 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 2-217
Cow position: chr11:85571633-85571845 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 2-218
Cow position: chr11:20561820-20562035 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 0

Conread position: 2-218
Cow position: chr11:32710689-32710473 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 2-218
Cow position: chr11:34616434-34616217 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 153, 0

Conread position: 2-218
Cow position: chr11:48429292-48429075 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 74

Conread position: 2-218
Cow position: chr11:48672887-48672673 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 181, 0

Conread position: 2-218
Cow position: chr11:64009899-64009678 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 166, 133

Conread position: 2-218
Cow position: chr11:71345143-71345365 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 2-218
Cow position: chr11:78820322-78820113 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 76, 0

Conread position: 2-219
Cow position: chr11:17831034-17831263 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 185

Conread position: 2-219
Cow position: chr11:64101946-64101733 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 73, 13

Conread position: 2-219
Cow position: chr11:66188148-66188359 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 2-220
Cow position: chr11:62742475-62742686 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 2-221
Cow position: chr11:8988057-8988274 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 61

Conread position: 2-221
Cow position: chr11:71707977-71707772 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 2-221
Cow position: chr11:75479849-75480064 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 137, 0

Conread position: 2-222
Cow position: chr11:3283214-3282984 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 60, 174

Conread position: 2-222
Cow position: chr11:13863929-13864150 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 2-222
Cow position: chr11:17321838-17321602 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 62, 102

Conread position: 2-222
Cow position: chr11:17889554-17889776 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 2-222
Cow position: chr11:25745481-25745262 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 139, 155

Conread position: 2-222
Cow position: chr11:27913459-27913239 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 67

Conread position: 2-222
Cow position: chr11:36920405-36920623 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 177
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 85, 27

Conread position: 2-222
Cow position: chr11:50073128-50072892 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 0

Conread position: 2-222
Cow position: chr11:62230361-62230135 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 78, 0

Conread position: 2-222
Cow position: chr11:69307703-69307468 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 20

Conread position: 2-222
Cow position: chr11:71854111-71854324 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 0

Conread position: 2-223
Cow position: chr11:37989450-37989666 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 2-225
Cow position: chr11:41343-41130 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 132, 40

Conread position: 2-225
Cow position: chr11:1067265-1067488 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-225
Cow position: chr11:30721273-30721050 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 2-225
Cow position: chr11:68909680-68909894 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 163, 0

Conread position: 2-225
Cow position: chr11:69168761-69168537 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 2-225
Cow position: chr11:70756647-70756433 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 217, 60

Conread position: 2-227
Cow position: chr11:29659732-29659507 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 22

Conread position: 2-227
Cow position: chr11:35724143-35723919 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 74, 55

Conread position: 2-228
Cow position: chr11:6594056-6594303 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 0

Conread position: 2-229
Cow position: chr11:38334694-38334471 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 46, 0

Conread position: 2-229
Cow position: chr11:48650159-48649918 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 74, 0

Conread position: 2-231
Cow position: chr11:5218992-5219213 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 2-231
Cow position: chr11:5433439-5433212 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 174, 55

Conread position: 2-231
Cow position: chr11:6194561-6194352 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 2-231
Cow position: chr11:8670190-8669955 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 2-231
Cow position: chr11:13042975-13043202 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 79

Conread position: 2-231
Cow position: chr11:13592912-13592679 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 2-231
Cow position: chr11:18699043-18698822 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 206, 58

Conread position: 2-231
Cow position: chr11:21508184-21507946 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 217

Conread position: 2-231
Cow position: chr11:29699514-29699753 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 55, 188

Conread position: 2-231
Cow position: chr11:42291667-42291889 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 2-231
Cow position: chr11:45283100-45282870 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 216, 54

Conread position: 2-231
Cow position: chr11:48474882-48474647 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 45

Conread position: 2-231
Cow position: chr11:53778793-53778560 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 2-231
Cow position: chr11:56288718-56288490 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 85

Conread position: 2-231
Cow position: chr11:63433893-63434112 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 2-231
Cow position: chr11:64048563-64048349 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 3-111
Cow position: chr11:71481852-71481960 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-112
Cow position: chr11:70273633-70273525 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 94
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 3-121
Cow position: chr11:43594256-43594373 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 3-121
Cow position: chr11:70824538-70824658 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 3-128
Cow position: chr11:68592191-68592066 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-129
Cow position: chr11:65939690-65939815 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 3-131
Cow position: chr11:53460870-53460742 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 84

Conread position: 3-131
Cow position: chr11:70634866-70634732 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 3-138
Cow position: chr11:26823284-26823148 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 86

Conread position: 3-139
Cow position: chr11:69035332-69035196 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-140
Cow position: chr11:65436394-65436257 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 85, 34

Conread position: 3-146
Cow position: chr11:1842129-1841994 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 3-147
Cow position: chr11:9691181-9691034 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 27

Conread position: 3-147
Cow position: chr11:17369698-17369560 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 3-147
Cow position: chr11:63491191-63491047 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-148
Cow position: chr11:51683388-51683244 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 84, 0

Conread position: 3-154
Cow position: chr11:44176765-44176618 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 126
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 3-155
Cow position: chr11:62606590-62606438 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-156
Cow position: chr11:63849778-63849931 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-157
Cow position: chr11:17552907-17553061 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 101

Conread position: 3-157
Cow position: chr11:50629442-50629296 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 3-157
Cow position: chr11:71192144-71191990 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 52

Conread position: 3-158
Cow position: chr11:5559455-5559300 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-158
Cow position: chr11:37565041-37564892 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 3-158
Cow position: chr11:76896201-76896356 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 3-159
Cow position: chr11:4390075-4389921 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 138, 0

Conread position: 3-159
Cow position: chr11:32108516-32108671 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 3-159
Cow position: chr11:41141057-41140904 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 3-159
Cow position: chr11:63475499-63475655 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-161
Cow position: chr11:30986808-30986654 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 3-161
Cow position: chr11:63484112-63483958 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 3-162
Cow position: chr11:36847341-36847182 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-162
Cow position: chr11:46314185-46314025 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 3-162
Cow position: chr11:53651812-53651655 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 3-162
Cow position: chr11:54872589-54872745 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 59

Conread position: 3-164
Cow position: chr11:37042146-37041984 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 3-164
Cow position: chr11:74839775-74839623 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 3-165
Cow position: chr11:75388205-75388363 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 122, 55

Conread position: 3-167
Cow position: chr11:62102274-62102436 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 76, 69

Conread position: 3-168
Cow position: chr11:34747680-34747515 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-169
Cow position: chr11:15278846-15279005 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 3-169
Cow position: chr11:77241874-77241713 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 3-171
Cow position: chr11:11483493-11483318 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 69, 160

Conread position: 3-172
Cow position: chr11:6319959-6320128 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-172
Cow position: chr11:42498016-42497849 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 3-172
Cow position: chr11:74152577-74152750 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 3-173
Cow position: chr11:19277980-19278150 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-173
Cow position: chr11:21124437-21124607 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-173
Cow position: chr11:41239019-41239187 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 3-174
Cow position: chr11:17112159-17112337 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 19

Conread position: 3-174
Cow position: chr11:25968681-25968852 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 143
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 155, 137

Conread position: 3-174
Cow position: chr11:35544258-35544087 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-174
Cow position: chr11:71456002-71455823 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 3-175
Cow position: chr11:2484624-2484793 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 79, 14

Conread position: 3-175
Cow position: chr11:7427762-7427938 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 174

Conread position: 3-175
Cow position: chr11:41278359-41278187 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 3-175
Cow position: chr11:70600655-70600827 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 140
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 3-175
Cow position: chr11:81143372-81143541 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 133, 54

Conread position: 3-176
Cow position: chr11:3728658-3728486 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 157, 0

Conread position: 3-176
Cow position: chr11:4436933-4436748 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 3-176
Cow position: chr11:30322322-30322492 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 3-176
Cow position: chr11:36361469-36361644 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 153, 0

Conread position: 3-176
Cow position: chr11:42206588-42206422 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 3-176
Cow position: chr11:58186044-58185883 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 72, 0

Conread position: 3-176
Cow position: chr11:63498959-63499128 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 3-176
Cow position: chr11:79548761-79548937 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 22, 73

Conread position: 3-176
Cow position: chr11:80007890-80008067 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 73, 101

Conread position: 3-176
Cow position: chr11:80370286-80370115 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 132, 0

Conread position: 3-177
Cow position: chr11:23278791-23278964 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 59, 19

Conread position: 3-177
Cow position: chr11:38226415-38226242 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 3-178
Cow position: chr11:32747967-32747793 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 3-180
Cow position: chr11:1932142-1931958 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 158

Conread position: 3-180
Cow position: chr11:25376684-25376496 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 66, 151

Conread position: 3-181
Cow position: chr11:6581006-6580828 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-181
Cow position: chr11:36136280-36136103 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 120

Conread position: 3-181
Cow position: chr11:42064052-42064229 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 3-181
Cow position: chr11:49210645-49210826 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 95

Conread position: 3-181
Cow position: chr11:57767361-57767186 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 3-182
Cow position: chr11:58102586-58102766 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 54, 34

Conread position: 3-183
Cow position: chr11:3992083-3991903 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-183
Cow position: chr11:7571792-7571618 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 3-183
Cow position: chr11:36300412-36300584 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 0

Conread position: 3-183
Cow position: chr11:45671208-45671376 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 3-183
Cow position: chr11:55398979-55399158 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 3-185
Cow position: chr11:23518445-23518628 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 3-185
Cow position: chr11:35922027-35922202 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 137, 10

Conread position: 3-185
Cow position: chr11:63407866-63407691 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 3-186
Cow position: chr11:42192007-42192197 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 3-186
Cow position: chr11:64781260-64781077 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 3-187
Cow position: chr11:41980032-41980215 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 57, 19

Conread position: 3-187
Cow position: chr11:75557747-75557949 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 3-189
Cow position: chr11:20234858-20234672 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-189
Cow position: chr11:25614631-25614826 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 179

Conread position: 3-189
Cow position: chr11:49396354-49396538 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 151
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 74, 0

Conread position: 3-189
Cow position: chr11:60296910-60296718 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 159
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 159

Conread position: 3-189
Cow position: chr11:66104221-66104407 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 121, 56

Conread position: 3-189
Cow position: chr11:77017402-77017229 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 76, 56

Conread position: 3-189
Cow position: chr11:77758589-77758773 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 152
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 19

Conread position: 3-189
Cow position: chr11:86895544-86895364 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 71, 0

Conread position: 3-192
Cow position: chr11:15366806-15366988 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 154
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 57, 0

Conread position: 3-192
Cow position: chr11:27502531-27502717 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 3-192
Cow position: chr11:37100000-37100184 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 153
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 83, 0

Conread position: 3-192
Cow position: chr11:47314251-47314447 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 65, 120

Conread position: 3-192
Cow position: chr11:87171904-87172092 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 3-193
Cow position: chr11:9699083-9699261 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 3-193
Cow position: chr11:41576701-41576884 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 73, 44

Conread position: 3-193
Cow position: chr11:42084501-42084692 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 0

Conread position: 3-193
Cow position: chr11:73940390-73940576 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 167, 0

Conread position: 3-193
Cow position: chr11:75246337-75246143 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 156

Conread position: 3-194
Cow position: chr11:12555132-12555323 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 3-194
Cow position: chr11:74379065-74378857 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 3-195
Cow position: chr11:38989-38792 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 3-195
Cow position: chr11:66099685-66099881 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 3-197
Cow position: chr11:10563177-10562988 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 56

Conread position: 3-197
Cow position: chr11:49207883-49207691 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 150, 0

Conread position: 3-199
Cow position: chr11:25783887-25783690 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 3-199
Cow position: chr11:45350338-45350534 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 3-199
Cow position: chr11:68660442-68660633 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 3-201
Cow position: chr11:3175840-3175649 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 3-201
Cow position: chr11:79466394-79466187 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 3-202
Cow position: chr11:32782702-32782909 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 60, 0

Conread position: 3-202
Cow position: chr11:71022172-71021975 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 47

Conread position: 3-203
Cow position: chr11:32881317-32881117 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-203
Cow position: chr11:40516943-40517142 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 149, 0

Conread position: 3-203
Cow position: chr11:43914465-43914265 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-204
Cow position: chr11:47784952-47784747 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 54, 0

Conread position: 3-205
Cow position: chr11:4151115-4150924 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 143, 37

Conread position: 3-205
Cow position: chr11:18119674-18119473 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 138, 27

Conread position: 3-205
Cow position: chr11:25604125-25603921 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 53, 191

Conread position: 3-205
Cow position: chr11:41215905-41215704 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 3-206
Cow position: chr11:80564469-80564264 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 71, 98

Conread position: 3-207
Cow position: chr11:7458108-7458312 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 137
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-207
Cow position: chr11:8437518-8437724 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 68, 14

Conread position: 3-207
Cow position: chr11:18425067-18425271 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-207
Cow position: chr11:30867349-30867153 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 3-207
Cow position: chr11:31024629-31024837 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 3-207
Cow position: chr11:33002139-33001934 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 3-207
Cow position: chr11:34968441-34968644 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 69

Conread position: 3-207
Cow position: chr11:35769059-35768855 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-207
Cow position: chr11:63975303-63975099 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-208
Cow position: chr11:29308754-29308549 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 3-208
Cow position: chr11:31537276-31537471 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 79, 96

Conread position: 3-208
Cow position: chr11:70304247-70304040 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 184

Conread position: 3-210
Cow position: chr11:6395925-6395722 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 26

Conread position: 3-210
Cow position: chr11:8496205-8495998 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 197, 100

Conread position: 3-210
Cow position: chr11:66939419-66939626 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-210
Cow position: chr11:67312957-67312747 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 170
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 64, 19

Conread position: 3-211
Cow position: chr11:32260703-32260500 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 125

Conread position: 3-211
Cow position: chr11:34646767-34646555 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 3-211
Cow position: chr11:62620548-62620342 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 3-212
Cow position: chr11:31413629-31413418 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 19

Conread position: 3-212
Cow position: chr11:35212999-35213203 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 27, 0

Conread position: 3-213
Cow position: chr11:1952751-1952541 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-213
Cow position: chr11:46245687-46245902 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 3-213
Cow position: chr11:58173807-58173589 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 173
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 34, 158

Conread position: 3-215
Cow position: chr11:56115109-56114902 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 26, 60

Conread position: 3-215
Cow position: chr11:74427851-74427639 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-216
Cow position: chr11:10550069-10549860 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 31, 56

Conread position: 3-216
Cow position: chr11:41603529-41603725 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 3-216
Cow position: chr11:43360615-43360816 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 78, 0

Conread position: 3-216
Cow position: chr11:77705922-77705719 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 70, 0

Conread position: 3-216
Cow position: chr11:83043195-83043402 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 3-217
Cow position: chr11:8457728-8457942 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 202, 210

Conread position: 3-217
Cow position: chr11:45619522-45619312 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 68, 0

Conread position: 3-217
Cow position: chr11:52132649-52132860 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 50, 92

Conread position: 3-217
Cow position: chr11:52380700-52380912 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 3-218
Cow position: chr11:1625050-1625265 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 103

Conread position: 3-218
Cow position: chr11:3714994-3714784 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 173, 0

Conread position: 3-218
Cow position: chr11:5417058-5416843 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-218
Cow position: chr11:6006481-6006265 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 166, 54

Conread position: 3-218
Cow position: chr11:6423226-6423446 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 168, 75

Conread position: 3-218
Cow position: chr11:16315046-16314831 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-218
Cow position: chr11:17900324-17900535 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 3-218
Cow position: chr11:20238848-20238635 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 3-218
Cow position: chr11:25119764-25119972 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 3-218
Cow position: chr11:29954540-29954330 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 3-218
Cow position: chr11:35580433-35580218 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 199, 74

Conread position: 3-218
Cow position: chr11:35805832-35805617 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 166, 183

Conread position: 3-218
Cow position: chr11:36058970-36058755 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-218
Cow position: chr11:36977979-36977765 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 158, 0

Conread position: 3-218
Cow position: chr11:39060433-39060643 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 78, 0

Conread position: 3-218
Cow position: chr11:41213224-41213001 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 174
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 79, 0

Conread position: 3-218
Cow position: chr11:51195925-51196116 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 3-218
Cow position: chr11:52690353-52690561 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 3-218
Cow position: chr11:57503652-57503441 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 68, 57

Conread position: 3-218
Cow position: chr11:62578975-62578761 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 3-218
Cow position: chr11:62964666-62964448 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 124

Conread position: 3-218
Cow position: chr11:65826582-65826792 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 3-218
Cow position: chr11:70951039-70950829 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 3-218
Cow position: chr11:80923154-80923362 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 19

Conread position: 3-219
Cow position: chr11:1485688-1485917 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 92, 65

Conread position: 3-219
Cow position: chr11:9270566-9270767 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 26, 0

Conread position: 3-219
Cow position: chr11:21886002-21885791 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 3-219
Cow position: chr11:55053035-55052828 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 208, 19

Conread position: 3-220
Cow position: chr11:7874312-7874095 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 3-220
Cow position: chr11:17676203-17676416 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 3-220
Cow position: chr11:57724651-57724868 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-221
Cow position: chr11:897836-897629 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 3-221
Cow position: chr11:6857903-6857686 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 192

Conread position: 3-221
Cow position: chr11:7500921-7500698 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 175, 34

Conread position: 3-221
Cow position: chr11:30964515-30964302 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 96, 59

Conread position: 3-221
Cow position: chr11:42067036-42066817 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 153, 75

Conread position: 3-221
Cow position: chr11:49057555-49057359 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 3-221
Cow position: chr11:67600950-67600740 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 3-221
Cow position: chr11:75285584-75285810 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 3-221
Cow position: chr11:75874600-75874799 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 70, 0

Conread position: 3-221
Cow position: chr11:80893954-80893738 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 174, 0

Conread position: 3-222
Cow position: chr11:1932316-1932537 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 73

Conread position: 3-222
Cow position: chr11:4207483-4207266 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 12

Conread position: 3-222
Cow position: chr11:13500182-13499972 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 3-222
Cow position: chr11:15017230-15017013 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 195, 0

Conread position: 3-222
Cow position: chr11:18447329-18447537 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 3-222
Cow position: chr11:18924919-18924700 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 3-222
Cow position: chr11:19247033-19247244 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 3-222
Cow position: chr11:19487307-19487526 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-222
Cow position: chr11:19657043-19657267 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 172, 75

Conread position: 3-222
Cow position: chr11:27404899-27405115 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 124

Conread position: 3-222
Cow position: chr11:27461939-27462143 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 3-222
Cow position: chr11:30172471-30172264 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 3-222
Cow position: chr11:30708677-30708461 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 103, 120

Conread position: 3-222
Cow position: chr11:34644830-34644610 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 73, 176

Conread position: 3-222
Cow position: chr11:35444217-35443999 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 205, 86

Conread position: 3-222
Cow position: chr11:37778645-37778876 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 3-222
Cow position: chr11:44032178-44031960 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 181, 19

Conread position: 3-222
Cow position: chr11:44223053-44222844 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 3-222
Cow position: chr11:45276976-45277194 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 73, 151

Conread position: 3-222
Cow position: chr11:46746808-46746586 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 103, 44

Conread position: 3-222
Cow position: chr11:46999158-46998935 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 77, 169

Conread position: 3-222
Cow position: chr11:49872715-49872930 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 3-222
Cow position: chr11:50152641-50152859 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 84, 0

Conread position: 3-222
Cow position: chr11:52297051-52297264 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 3-222
Cow position: chr11:61454331-61454559 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 51, 42

Conread position: 3-222
Cow position: chr11:62239913-62239700 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 3-222
Cow position: chr11:62754126-62754364 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 3-222
Cow position: chr11:63998918-63999133 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 73, 85

Conread position: 3-222
Cow position: chr11:65157233-65157454 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 3-222
Cow position: chr11:77750589-77750815 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 62, 100

Conread position: 3-222
Cow position: chr11:81167859-81168072 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 120, 0

Conread position: 3-223
Cow position: chr11:17990065-17990283 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 124

Conread position: 3-223
Cow position: chr11:27747090-27746877 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 3-223
Cow position: chr11:28078661-28078457 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 70, 0

Conread position: 3-223
Cow position: chr11:29786321-29786545 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 3-223
Cow position: chr11:62811468-62811251 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-224
Cow position: chr11:20205686-20205899 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 3-224
Cow position: chr11:83042068-83042304 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 3-225
Cow position: chr11:5418088-5418309 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 166, 54

Conread position: 3-225
Cow position: chr11:6642986-6642765 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 202, 158

Conread position: 3-225
Cow position: chr11:15772541-15772760 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 3-225
Cow position: chr11:17721629-17721852 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 211, 78

Conread position: 3-225
Cow position: chr11:23271834-23272049 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 0

Conread position: 3-225
Cow position: chr11:25620218-25620445 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 153, 63

Conread position: 3-225
Cow position: chr11:30209651-30209868 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 19, 0

Conread position: 3-225
Cow position: chr11:31417595-31417371 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 206, 0

Conread position: 3-225
Cow position: chr11:33286783-33287006 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 202, 0

Conread position: 3-225
Cow position: chr11:43524782-43524560 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-225
Cow position: chr11:48086090-48085868 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 142, 57

Conread position: 3-225
Cow position: chr11:53649199-53649422 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 202, 19

Conread position: 3-225
Cow position: chr11:56311428-56311644 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 104, 0

Conread position: 3-225
Cow position: chr11:59024181-59024408 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 176
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 142

Conread position: 3-225
Cow position: chr11:62789299-62789083 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 65, 0

Conread position: 3-225
Cow position: chr11:63485104-63484898 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 3-225
Cow position: chr11:67614753-67614971 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 200, 78

Conread position: 3-225
Cow position: chr11:70483679-70483900 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 73, 0

Conread position: 3-225
Cow position: chr11:72375494-72375732 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 73, 0

Conread position: 3-225
Cow position: chr11:81138384-81138162 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 198, 135

Conread position: 3-225
Cow position: chr11:82730812-82731047 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 69, 0

Conread position: 3-225
Cow position: chr11:84890556-84890765 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 3-226
Cow position: chr11:2084317-2084094 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-226
Cow position: chr11:6233706-6233929 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 59

Conread position: 3-226
Cow position: chr11:27907942-27907733 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 3-226
Cow position: chr11:30192350-30192124 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 23

Conread position: 3-226
Cow position: chr11:39462791-39462574 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 3-226
Cow position: chr11:66325935-66326159 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 88, 211

Conread position: 3-226
Cow position: chr11:68401973-68401752 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 3-227
Cow position: chr11:2907362-2907572 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 3-227
Cow position: chr11:5602628-5602399 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 5

Conread position: 3-227
Cow position: chr11:6245493-6245269 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 159

Conread position: 3-227
Cow position: chr11:17859981-17860205 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 70, 107

Conread position: 3-227
Cow position: chr11:19118810-19119033 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 142, 0

Conread position: 3-227
Cow position: chr11:19591824-19592043 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 0

Conread position: 3-227
Cow position: chr11:32055013-32055239 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 179, 75

Conread position: 3-227
Cow position: chr11:32398813-32398588 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 59, 115

Conread position: 3-227
Cow position: chr11:47725061-47724848 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 3-227
Cow position: chr11:68913315-68913089 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 3-227
Cow position: chr11:74380363-74380139 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 138, 177

Conread position: 3-228
Cow position: chr11:2788567-2788341 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 217, 0

Conread position: 3-228
Cow position: chr11:5961479-5961251 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 185, 0

Conread position: 3-228
Cow position: chr11:13940359-13940139 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 86, 45

Conread position: 3-228
Cow position: chr11:30165683-30165458 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 213, 188

Conread position: 3-228
Cow position: chr11:51729446-51729234 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 215, 55

Conread position: 3-228
Cow position: chr11:59862382-59862156 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 75, 211

Conread position: 3-228
Cow position: chr11:70422423-70422644 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 66, 19

Conread position: 3-229
Cow position: chr11:2925136-2925350 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 217, 37

Conread position: 3-229
Cow position: chr11:30764664-30764437 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 202, 0

Conread position: 3-229
Cow position: chr11:40792521-40792759 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 72, 0

Conread position: 3-229
Cow position: chr11:41133908-41134118 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 3-229
Cow position: chr11:57608294-57608508 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 3-229
Cow position: chr11:65058440-65058670 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 173, 108

Conread position: 3-230
Cow position: chr11:40395608-40395385 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 192, 57

Conread position: 3-231
Cow position: chr11:3720427-3720198 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 217, 157

Conread position: 3-231
Cow position: chr11:3908442-3908670 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 202, 139

Conread position: 3-231
Cow position: chr11:4732516-4732284 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 202, 0

Conread position: 3-231
Cow position: chr11:5217288-5217522 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 73, 57

Conread position: 3-231
Cow position: chr11:5231475-5231707 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 157, 83

Conread position: 3-231
Cow position: chr11:7013556-7013793 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 197

Conread position: 3-231
Cow position: chr11:7385606-7385382 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 213, 52

Conread position: 3-231
Cow position: chr11:14470533-14470313 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 217, 55

Conread position: 3-231
Cow position: chr11:15504281-15504059 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 3-231
Cow position: chr11:21893977-21894213 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 158

Conread position: 3-231
Cow position: chr11:24438047-24438280 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 166, 100

Conread position: 3-231
Cow position: chr11:32254044-32254273 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 84

Conread position: 3-231
Cow position: chr11:35347579-35347807 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 3-231
Cow position: chr11:35980969-35981203 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 179, 118

Conread position: 3-231
Cow position: chr11:36914393-36914620 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 221, 0

Conread position: 3-231
Cow position: chr11:36940422-36940653 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 216, 0

Conread position: 3-231
Cow position: chr11:39250136-39249919 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 18, 0

Conread position: 3-231
Cow position: chr11:41313490-41313712 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 217, 27

Conread position: 3-231
Cow position: chr11:41438013-41438242 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 217, 0

Conread position: 3-231
Cow position: chr11:42016467-42016688 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 200, 9

Conread position: 3-231
Cow position: chr11:42884613-42884839 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 142, 0

Conread position: 3-231
Cow position: chr11:43008134-43008363 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 54, 164

Conread position: 3-231
Cow position: chr11:45435247-45435025 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 174, 34

Conread position: 3-231
Cow position: chr11:46329670-46329440 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 180, 14

Conread position: 3-231
Cow position: chr11:47310812-47311039 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 215, 179

Conread position: 3-231
Cow position: chr11:48383702-48383473 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 162

Conread position: 3-231
Cow position: chr11:48544608-48544375 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 115, 70

Conread position: 3-231
Cow position: chr11:49149218-49148985 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 53

Conread position: 3-231
Cow position: chr11:49153112-49152896 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 57, 0

Conread position: 3-231
Cow position: chr11:64029095-64029318 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 223, 84

Conread position: 3-231
Cow position: chr11:64077330-64077560 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 179, 98

Conread position: 3-231
Cow position: chr11:65607519-65607746 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 24, 76

Conread position: 3-231
Cow position: chr11:67345487-67345710 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 132

Conread position: 3-231
Cow position: chr11:71390402-71390615 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 3-231
Cow position: chr11:73573819-73573591 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-231
Cow position: chr11:75178070-75177840 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 123

Conread position: 4-133
Cow position: chr11:23278982-23279114 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 4-147
Cow position: chr11:18574683-18574826 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 4-156
Cow position: chr11:30857206-30857058 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 107, 54

Conread position: 4-156
Cow position: chr11:67208420-67208273 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 4-158
Cow position: chr11:81175769-81175615 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 58

Conread position: 4-159
Cow position: chr11:31210788-31210943 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-163
Cow position: chr11:32800798-32800639 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 128
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 4-164
Cow position: chr11:18910713-18910873 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 75

Conread position: 4-169
Cow position: chr11:19147971-19148129 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 4-173
Cow position: chr11:30600019-30600188 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 4-180
Cow position: chr11:64022939-64023103 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 4-181
Cow position: chr11:32653461-32653281 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 170, 0

Conread position: 4-181
Cow position: chr11:33368242-33368078 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 4-186
Cow position: chr11:1485063-1485236 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 147
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 97, 59

Conread position: 4-188
Cow position: chr11:6094233-6094414 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 148
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 77, 0

Conread position: 4-188
Cow position: chr11:27760689-27760506 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 4-192
Cow position: chr11:48315228-48315412 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 4-195
Cow position: chr11:35149573-35149380 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 72, 113

Conread position: 4-197
Cow position: chr11:17517570-17517378 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 157
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 72, 18

Conread position: 4-202
Cow position: chr11:72292732-72292527 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 4-205
Cow position: chr11:28993577-28993766 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 0

Conread position: 4-206
Cow position: chr11:48776142-48776346 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 137, 0

Conread position: 4-207
Cow position: chr11:30894832-30895034 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 74, 64

Conread position: 4-209
Cow position: chr11:42296456-42296652 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 44

Conread position: 4-210
Cow position: chr11:69417574-69417370 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 4-216
Cow position: chr11:18543350-18543545 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 4-217
Cow position: chr11:35109369-35109578 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 18

Conread position: 4-217
Cow position: chr11:39554018-39554238 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 4-217
Cow position: chr11:52415620-52415393 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 170

Conread position: 4-217
Cow position: chr11:71111069-71110851 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 71, 26

Conread position: 4-218
Cow position: chr11:8462176-8461963 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 4-218
Cow position: chr11:20194253-20194467 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 4-218
Cow position: chr11:20762023-20761806 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 65, 148

Conread position: 4-218
Cow position: chr11:34467733-34467530 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 49, 0

Conread position: 4-218
Cow position: chr11:73353896-73354101 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 4-220
Cow position: chr11:6202627-6202399 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 4-221
Cow position: chr11:10095514-10095299 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 74, 0

Conread position: 4-221
Cow position: chr11:35351862-35352083 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 153

Conread position: 4-221
Cow position: chr11:63866490-63866703 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 77

Conread position: 4-222
Cow position: chr11:4637004-4637217 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 74, 0

Conread position: 4-222
Cow position: chr11:66572321-66572542 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 69, 165

Conread position: 4-222
Cow position: chr11:83398078-83397860 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 4-223
Cow position: chr11:81913552-81913768 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 4-223
Cow position: chr11:87155695-87155474 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 19, 170

Conread position: 4-224
Cow position: chr11:32126787-32126557 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 87

Conread position: 4-225
Cow position: chr11:132155-132378 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 149, 104

Conread position: 4-225
Cow position: chr11:1380848-1380627 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 4-225
Cow position: chr11:19606765-19606527 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 4-225
Cow position: chr11:62482813-62482592 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 4-225
Cow position: chr11:73796997-73797222 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 145, 83

Conread position: 4-226
Cow position: chr11:8524947-8525163 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 216, 50

Conread position: 4-226
Cow position: chr11:18656393-18656168 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 94, 212

Conread position: 4-226
Cow position: chr11:45872139-45872359 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 78, 0

Conread position: 4-226
Cow position: chr11:62812781-62813001 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 8, 19

Conread position: 4-226
Cow position: chr11:81300450-81300670 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 66, 0

Conread position: 4-227
Cow position: chr11:15369560-15369337 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-228
Cow position: chr11:36647498-36647297 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 4-229
Cow position: chr11:6296907-6297132 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 4-229
Cow position: chr11:53817026-53816804 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 84, 171

Conread position: 4-231
Cow position: chr11:77745078-77745306 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 5-121
Cow position: chr11:14447681-14447565 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 5-124
Cow position: chr11:80503991-80504110 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 5-134
Cow position: chr11:899606-899476 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 5-141
Cow position: chr11:1265372-1265508 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 5-143
Cow position: chr11:12742324-12742457 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 5-147
Cow position: chr11:33271599-33271460 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 5-148
Cow position: chr11:44016415-44016272 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 5-149
Cow position: chr11:15881250-15881393 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 5-158
Cow position: chr11:82732984-82733131 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 5-163
Cow position: chr11:35732913-35733070 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 129
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 5-169
Cow position: chr11:40818462-40818619 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 5-171
Cow position: chr11:26057477-26057645 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 77, 0

Conread position: 5-176
Cow position: chr11:9836285-9836456 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 5-176
Cow position: chr11:85186358-85186527 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 5-180
Cow position: chr11:79666092-79666265 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 0

Conread position: 5-184
Cow position: chr11:36917595-36917784 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 54, 120

Conread position: 5-192
Cow position: chr11:19578115-19577926 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 60

Conread position: 5-193
Cow position: chr11:21830041-21830226 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 58, 0

Conread position: 5-203
Cow position: chr11:70458214-70458015 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 71, 90

Conread position: 5-210
Cow position: chr11:3896528-3896732 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 85, 174

Conread position: 5-216
Cow position: chr11:46747689-46747900 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-218
Cow position: chr11:41985878-41986087 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 5-218
Cow position: chr11:48296195-48295992 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 5-218
Cow position: chr11:55762027-55761827 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 5-221
Cow position: chr11:9221552-9221770 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 53, 181

Conread position: 5-221
Cow position: chr11:21843969-21844176 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 71, 0

Conread position: 5-222
Cow position: chr11:29960462-29960253 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 5-222
Cow position: chr11:47772212-47772435 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 5-222
Cow position: chr11:53888479-53888681 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 130, 0

Conread position: 5-222
Cow position: chr11:59463469-59463682 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 84

Conread position: 5-222
Cow position: chr11:85723864-85723652 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 108, 0

Conread position: 5-223
Cow position: chr11:26535954-26535726 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 108, 70

Conread position: 5-224
Cow position: chr11:11994542-11994756 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 75, 56

Conread position: 5-224
Cow position: chr11:38211811-38211598 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 10

Conread position: 5-224
Cow position: chr11:47837489-47837273 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 17

Conread position: 5-225
Cow position: chr11:47351505-47351294 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 5-226
Cow position: chr11:42083623-42083423 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 53, 0

Conread position: 5-227
Cow position: chr11:36218461-36218243 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 64, 45

Conread position: 5-227
Cow position: chr11:55744639-55744418 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 5-230
Cow position: chr11:14378613-14378386 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 171, 0

Conread position: 5-231
Cow position: chr11:10956704-10956927 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 5-231
Cow position: chr11:25791523-25791747 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 182, 0

Conread position: 5-231
Cow position: chr11:27565486-27565279 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 5-231
Cow position: chr11:30638782-30639004 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 5-231
Cow position: chr11:37918878-37919100 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 25, 111

Conread position: 5-231
Cow position: chr11:55334089-55333855 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 83, 0

Conread position: 5-231
Cow position: chr11:68904918-68905131 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 5-231
Cow position: chr11:78380899-78381115 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 0

Conread position: 5-231
Cow position: chr11:80412839-80413069 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 169

Conread position: 6-122
Cow position: chr11:57873977-57873863 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 6-156
Cow position: chr11:73638024-73637875 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 6-161
Cow position: chr11:7617039-7617191 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 54

Conread position: 6-176
Cow position: chr11:77227699-77227539 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 53

Conread position: 6-195
Cow position: chr11:46784632-46784456 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 6-218
Cow position: chr11:12076916-12077127 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 0

Conread position: 6-219
Cow position: chr11:17227482-17227684 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 63, 0

Conread position: 6-220
Cow position: chr11:26632844-26633057 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 16, 0

Conread position: 6-221
Cow position: chr11:6633895-6633666 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 0

Conread position: 6-221
Cow position: chr11:39854853-39855058 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 6-222
Cow position: chr11:30728570-30728355 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 34, 0

Conread position: 6-222
Cow position: chr11:46113083-46113291 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 83

Conread position: 6-222
Cow position: chr11:85703858-85703657 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 6-223
Cow position: chr11:15382326-15382550 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 6-225
Cow position: chr11:7378751-7378546 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 214, 46

Conread position: 6-225
Cow position: chr11:7560170-7559949 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 199, 0

Conread position: 6-225
Cow position: chr11:63435691-63435473 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 6-226
Cow position: chr11:32777843-32777630 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 119

Conread position: 6-228
Cow position: chr11:32199112-32198885 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 163, 97

Conread position: 6-229
Cow position: chr11:5249347-5249581 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 43, 152

Conread position: 6-229
Cow position: chr11:38236414-38236199 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 31, 0

Conread position: 6-231
Cow position: chr11:34144750-34144970 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 69, 143

Conread position: 7-156
Cow position: chr11:63695671-63695825 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 128
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 91, 0

Conread position: 7-163
Cow position: chr11:86664613-86664768 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 7-169
Cow position: chr11:35924230-35924068 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 124, 38

Conread position: 7-172
Cow position: chr11:26442335-26442500 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 7-190
Cow position: chr11:1980097-1980281 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 148
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 76, 0

Conread position: 7-194
Cow position: chr11:36092751-36092934 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 140, 40

Conread position: 7-208
Cow position: chr11:64409134-64408945 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 66, 0

Conread position: 7-215
Cow position: chr11:32436513-32436296 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 23

Conread position: 7-218
Cow position: chr11:7331214-7331011 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 36, 51

Conread position: 7-218
Cow position: chr11:37804384-37804595 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-224
Cow position: chr11:23407628-23407415 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 204, 53

Conread position: 7-226
Cow position: chr11:27248656-27248444 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 7-231
Cow position: chr11:4199442-4199216 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 60, 150

Conread position: 8-138
Cow position: chr11:38657015-38657145 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 8-142
Cow position: chr11:2281156-2281290 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 8-158
Cow position: chr11:78672838-78672689 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 8-188
Cow position: chr11:42189294-42189473 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 8-204
Cow position: chr11:60486249-60486447 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 161
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 25

Conread position: 8-221
Cow position: chr11:83066659-83066453 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 169

Conread position: 8-222
Cow position: chr11:17493651-17493433 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 17, 41

Conread position: 8-227
Cow position: chr11:18243777-18243991 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 25, 110

Conread position: 8-228
Cow position: chr11:63065819-63065604 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 103, 18

Conread position: 10-179
Cow position: chr11:37982410-37982580 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 10-202
Cow position: chr11:22874635-22874443 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 10-218
Cow position: chr11:31875259-31875051 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-231
Cow position: chr11:71868439-71868659 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 171
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 210, 18

Conread position: 11-141
Cow position: chr11:86925799-86925925 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 11-164
Cow position: chr11:29779767-29779614 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-186
Cow position: chr11:36963973-36964150 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 11-202
Cow position: chr11:27972259-27972450 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 177

Conread position: 11-207
Cow position: chr11:78544449-78544253 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 11-208
Cow position: chr11:18508865-18509062 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 11-208
Cow position: chr11:75090055-75090250 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 11, 0

Conread position: 11-218
Cow position: chr11:3597283-3597076 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 11-218
Cow position: chr11:62663078-62663273 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 0

Conread position: 11-218
Cow position: chr11:76653185-76652978 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 11-223
Cow position: chr11:7314985-7315195 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 11-223
Cow position: chr11:14649147-14649360 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 11-224
Cow position: chr11:81849052-81848839 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 209, 19

Conread position: 11-225
Cow position: chr11:3920139-3920354 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 194, 131

Conread position: 11-225
Cow position: chr11:35791656-35791870 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 11-225
Cow position: chr11:36217536-36217746 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 11-225
Cow position: chr11:40466959-40467174 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 130, 78

Conread position: 11-225
Cow position: chr11:45700655-45700442 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 190, 144

Conread position: 11-225
Cow position: chr11:67911998-67912199 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 0

Conread position: 11-226
Cow position: chr11:66289717-66289502 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 11-230
Cow position: chr11:43430272-43430507 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 168

Conread position: 11-231
Cow position: chr11:5075066-5075285 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 197, 83

Conread position: 12-164
Cow position: chr11:72401572-72401720 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 12-166
Cow position: chr11:20021994-20021830 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 12-173
Cow position: chr11:4363750-4363908 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 12-179
Cow position: chr11:58472413-58472246 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-206
Cow position: chr11:35182824-35183017 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 179, 0

Conread position: 12-222
Cow position: chr11:4225251-4225052 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 12-227
Cow position: chr11:20684407-20684623 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 208, 0

Conread position: 13-207
Cow position: chr11:259014-259202 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 13-216
Cow position: chr11:3703114-3702911 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 13-217
Cow position: chr11:63202085-63202290 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 137, 0

Conread position: 13-218
Cow position: chr11:81406005-81406203 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 128, 74

Conread position: 13-231
Cow position: chr11:77238294-77238077 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 211, 0

Conread position: 14-193
Cow position: chr11:81041807-81041986 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 103

Conread position: 14-220
Cow position: chr11:38670851-38670642 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 92, 164

Conread position: 14-222
Cow position: chr11:71492701-71492905 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 0

Conread position: 14-225
Cow position: chr11:82289749-82289533 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 46, 160

Conread position: 14-231
Cow position: chr11:8544855-8545068 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 157, 0

Conread position: 14-231
Cow position: chr11:83357558-83357338 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 144

Conread position: 15-198
Cow position: chr11:8683918-8684101 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 17-158
Cow position: chr11:62081814-62081949 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 17-165
Cow position: chr11:7651907-7652055 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 17-176
Cow position: chr11:1922116-1922277 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 17-186
Cow position: chr11:471440-471270 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 76

Conread position: 17-216
Cow position: chr11:33293625-33293818 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 17-216
Cow position: chr11:54741927-54742120 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 17-216
Cow position: chr11:58927731-58927544 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 66, 43

Conread position: 17-218
Cow position: chr11:27343430-27343229 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 17-218
Cow position: chr11:35562879-35562678 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 17-218
Cow position: chr11:35665405-35665604 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 17-218
Cow position: chr11:61203324-61203124 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 186, 34

Conread position: 17-225
Cow position: chr11:4323520-4323310 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 25, 48

Conread position: 17-225
Cow position: chr11:22102740-22102949 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 188, 196

Conread position: 17-226
Cow position: chr11:54388061-54387857 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 17-231
Cow position: chr11:35564664-35564448 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 78

Conread position: 17-231
Cow position: chr11:40794193-40794406 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 188, 81

Conread position: 17-231
Cow position: chr11:41281204-41280983 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 152, 0

Conread position: 18-182
Cow position: chr11:56248902-56248740 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 149

Conread position: 18-221
Cow position: chr11:22319404-22319197 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 0

Conread position: 18-225
Cow position: chr11:34896720-34896512 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 202, 0

Conread position: 19-192
Cow position: chr11:35140066-35139892 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 159, 0

Conread position: 19-217
Cow position: chr11:39499511-39499316 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 19-222
Cow position: chr11:30370258-30370064 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 0

Conread position: 19-222
Cow position: chr11:59903048-59902845 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 19-226
Cow position: chr11:15062606-15062396 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 154, 197

Conread position: 19-228
Cow position: chr11:7320323-7320128 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 19-230
Cow position: chr11:56499994-56499784 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 21-215
Cow position: chr11:37435833-37436024 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 21-218
Cow position: chr11:11469499-11469689 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 21-225
Cow position: chr11:33311136-33310925 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 21-226
Cow position: chr11:4392192-4392403 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 161, 0

Conread position: 22-164
Cow position: chr11:55117599-55117457 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 22-165
Cow position: chr11:36104468-36104324 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 22-176
Cow position: chr11:37425002-37425149 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 22-176
Cow position: chr11:76248202-76248050 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 22-185
Cow position: chr11:67172555-67172708 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 22-189
Cow position: chr11:20117228-20117061 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 126, 71

Conread position: 22-189
Cow position: chr11:79707856-79707701 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 38

Conread position: 22-194
Cow position: chr11:18791910-18792085 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 22-200
Cow position: chr11:39057747-39057569 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 22-208
Cow position: chr11:30494144-30493965 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 22-210
Cow position: chr11:5792561-5792372 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 178, 0

Conread position: 22-217
Cow position: chr11:45646440-45646633 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 80, 58

Conread position: 22-218
Cow position: chr11:689506-689701 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 22-218
Cow position: chr11:34136394-34136202 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 22-218
Cow position: chr11:63396971-63396777 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 105, 0

Conread position: 22-220
Cow position: chr11:3715395-3715194 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 22-222
Cow position: chr11:52464558-52464367 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 22-228
Cow position: chr11:31228110-31227910 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 198, 17

Conread position: 22-231
Cow position: chr11:76890200-76889991 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 22-231
Cow position: chr11:84385484-84385692 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 155

Conread position: 23-166
Cow position: chr11:4411721-4411858 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 23-169
Cow position: chr11:17807809-17807955 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 23-210
Cow position: chr11:31410728-31410911 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 58, 0

Conread position: 23-218
Cow position: chr11:30830466-30830655 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 23-220
Cow position: chr11:26143942-26144140 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 0

Conread position: 23-224
Cow position: chr11:49934591-49934780 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 196, 52

Conread position: 24-217
Cow position: chr11:30808441-30808634 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 24-218
Cow position: chr11:19232799-19232993 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 184, 189

Conread position: 24-222
Cow position: chr11:30893547-30893743 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 170, 0

Conread position: 24-222
Cow position: chr11:68206695-68206889 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 131, 49

Conread position: 25-221
Cow position: chr11:40459260-40459063 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 26-217
Cow position: chr11:23586789-23586598 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 17

Conread position: 26-225
Cow position: chr11:84498794-84498999 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 119

Conread position: 26-227
Cow position: chr11:22977728-22977924 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 27-202
Cow position: chr11:9699037-9698877 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 27-225
Cow position: chr11:3393066-3393257 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 27-225
Cow position: chr11:36297534-36297731 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 27-227
Cow position: chr11:53510353-53510549 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 28-184
Cow position: chr11:6320223-6320376 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 28-221
Cow position: chr11:69119440-69119249 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 29-153
Cow position: chr11:34279891-34279766 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 29-158
Cow position: chr11:44859141-44859268 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 29-162
Cow position: chr11:15999803-15999672 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 29-162
Cow position: chr11:27688245-27688376 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 29-162
Cow position: chr11:37490431-37490562 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 29-175
Cow position: chr11:8520968-8520825 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 29-175
Cow position: chr11:36266121-36266265 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 29-181
Cow position: chr11:29482286-29482440 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 29-189
Cow position: chr11:41983012-41983179 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 29-197
Cow position: chr11:30476150-30475972 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 20

Conread position: 29-218
Cow position: chr11:953504-953315 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 29-218
Cow position: chr11:19946573-19946394 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 29-218
Cow position: chr11:53853236-53853047 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 29-218
Cow position: chr11:80616370-80616202 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 29-222
Cow position: chr11:81763024-81762817 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 28, 167

Conread position: 29-224
Cow position: chr11:35669811-35670000 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 44

Conread position: 29-228
Cow position: chr11:372559-372757 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 88

Conread position: 29-228
Cow position: chr11:63909509-63909716 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 49, 141

Conread position: 29-230
Cow position: chr11:35536730-35536532 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 195, 33

Conread position: 29-231
Cow position: chr11:36112564-36112369 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 29-231
Cow position: chr11:67804891-67804697 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 34

Conread position: 30-218
Cow position: chr11:84977220-84977400 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 154
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 86, 32

Conread position: 30-228
Cow position: chr11:83926185-83925997 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 11

Conread position: 31-222
Cow position: chr11:34113406-34113220 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 138, 29

Conread position: 32-193
Cow position: chr11:69624428-69624588 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 33-183
Cow position: chr11:15526257-15526107 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 76, 107

Conread position: 35-231
Cow position: chr11:59873063-59872876 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 90, 25

Conread position: 36-175
Cow position: chr11:61178491-61178359 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 13, 0

Conread position: 36-182
Cow position: chr11:81614372-81614519 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 37-193
Cow position: chr11:38202109-38201953 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 37-231
Cow position: chr11:71934818-71935010 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 183, 31

Conread position: 39-207
Cow position: chr11:2344388-2344220 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 118, 42

Conread position: 39-218
Cow position: chr11:37278087-37278265 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 39-222
Cow position: chr11:48248072-48248261 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 42-174
Cow position: chr11:84757967-84757835 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 105, 120

Conread position: 42-183
Cow position: chr11:79869463-79869319 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 42-217
Cow position: chr11:33414371-33414196 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 131, 124

Conread position: 42-231
Cow position: chr11:7924459-7924646 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 175, 98

Conread position: 43-166
Cow position: chr11:3948846-3948722 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 46

Conread position: 43-224
Cow position: chr11:6835667-6835485 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 177, 128

Conread position: 44-169
Cow position: chr11:31439968-31440094 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 44-221
Cow position: chr11:45849365-45849544 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 0

Conread position: 46-189
Cow position: chr11:70639979-70639833 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 19, 47

Conread position: 47-201
Cow position: chr11:30404697-30404539 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 48-217
Cow position: chr11:11523330-11523507 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 29

Conread position: 48-222
Cow position: chr11:76835496-76835670 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 32, 24

Conread position: 51-189
Cow position: chr11:63517233-63517099 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 51-208
Cow position: chr11:5789774-5789931 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 51-214
Cow position: chr11:53717682-53717844 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 20, 0

Conread position: 51-226
Cow position: chr11:22747202-22747379 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 118

Conread position: 52-218
Cow position: chr11:33753785-33753946 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 63

Conread position: 53-189
Cow position: chr11:37335966-37336101 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 54-218
Cow position: chr11:64107384-64107555 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 54-226
Cow position: chr11:28644210-28644036 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 166, 0

Conread position: 54-227
Cow position: chr11:72333711-72333539 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 145, 0

Conread position: 55-222
Cow position: chr11:59702609-59702441 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 26

Conread position: 55-225
Cow position: chr11:2933269-2933094 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 55-231
Cow position: chr11:36849039-36848873 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 33, 124

Conread position: 56-209
Cow position: chr11:62168210-62168363 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 129
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 7, 43

Conread position: 58-225
Cow position: chr11:77128777-77128612 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 19, 0

Conread position: 60-174
Cow position: chr11:42067170-42067056 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 61-225
Cow position: chr11:30925270-30925108 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 138
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 0

Conread position: 61-231
Cow position: chr11:40478739-40478907 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 0

Conread position: 62-157
Cow position: chr11:80596452-80596357 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 62-168
Cow position: chr11:2284758-2284652 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 62-175
Cow position: chr11:55714557-55714443 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 62-185
Cow position: chr11:46333588-46333465 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 62-189
Cow position: chr11:47585948-47586071 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 62-189
Cow position: chr11:62808392-62808518 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 62-195
Cow position: chr11:17768597-17768468 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 62-206
Cow position: chr11:37999379-37999233 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 132, 0

Conread position: 62-217
Cow position: chr11:377526-377682 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 62-217
Cow position: chr11:32684742-32684587 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 62-223
Cow position: chr11:29983604-29983763 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 62-225
Cow position: chr11:83687319-83687482 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 62-227
Cow position: chr11:3234188-3234023 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 158, 15

Conread position: 62-231
Cow position: chr11:49722012-49721844 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 143, 153

Conread position: 62-231
Cow position: chr11:79018944-79019116 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 157, 0

Conread position: 62-231
Cow position: chr11:80530475-80530312 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 91

Conread position: 63-158
Cow position: chr11:75246461-75246367 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 63-166
Cow position: chr11:78780745-78780848 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 90
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 63-183
Cow position: chr11:59916259-59916140 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 107
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 106, 24

Conread position: 63-187
Cow position: chr11:32615850-32615725 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 63-189
Cow position: chr11:70709901-70709771 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 63-201
Cow position: chr11:60470085-60470216 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 63-208
Cow position: chr11:30955114-30954969 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 63-215
Cow position: chr11:62778553-62778406 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 63-218
Cow position: chr11:18086234-18086381 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 63-218
Cow position: chr11:54334442-54334287 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 63-218
Cow position: chr11:69076024-69075870 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 63-222
Cow position: chr11:30888166-30888328 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 71, 110

Conread position: 63-222
Cow position: chr11:63847958-63847801 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 40, 30

Conread position: 63-224
Cow position: chr11:1070975-1071140 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 63-225
Cow position: chr11:34692965-34692805 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 63-225
Cow position: chr11:39118869-39118707 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 78, 22

Conread position: 63-225
Cow position: chr11:61958629-61958792 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 42

Conread position: 63-225
Cow position: chr11:66518599-66518442 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 13, 60

Conread position: 63-226
Cow position: chr11:56290625-56290461 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 157, 0

Conread position: 63-228
Cow position: chr11:7590302-7590140 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 157, 97

Conread position: 63-228
Cow position: chr11:70826062-70825897 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 63-231
Cow position: chr11:35573378-35573544 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 0

Conread position: 63-231
Cow position: chr11:70609912-70609732 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 80

Conread position: 64-183
Cow position: chr11:70651281-70651401 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 64-190
Cow position: chr11:31901299-31901172 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 64-192
Cow position: chr11:71767712-71767586 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 64-215
Cow position: chr11:68173645-68173493 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 16, 0

Conread position: 64-216
Cow position: chr11:42359233-42359075 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 64-222
Cow position: chr11:72884484-72884639 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 64-223
Cow position: chr11:36658713-36658865 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 64-225
Cow position: chr11:40573223-40573380 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 64-231
Cow position: chr11:70278000-70278164 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 134, 0

Conread position: 65-164
Cow position: chr11:34623282-34623183 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 65-175
Cow position: chr11:35860692-35860584 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 65-186
Cow position: chr11:37923382-37923262 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 65-193
Cow position: chr11:18189625-18189752 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 22

Conread position: 65-210
Cow position: chr11:69415487-69415630 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 113, 0

Conread position: 65-222
Cow position: chr11:61137063-61137220 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 66-218
Cow position: chr11:38577668-38577816 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 66-227
Cow position: chr11:33697745-33697592 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 67-175
Cow position: chr11:46452245-46452137 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 90
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 67-207
Cow position: chr11:62376364-62376504 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 138, 72

Conread position: 67-219
Cow position: chr11:29946803-29946956 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 128
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 67-222
Cow position: chr11:4652863-4653018 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 67-225
Cow position: chr11:23232410-23232564 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 100, 66

Conread position: 67-227
Cow position: chr11:36238887-36238730 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 68-197
Cow position: chr11:15682873-15683000 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 110
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 68-222
Cow position: chr11:71807458-71807614 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 118

Conread position: 69-193
Cow position: chr11:24185197-24185325 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 69-193
Cow position: chr11:81728541-81728665 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 18

Conread position: 69-213
Cow position: chr11:58938637-58938781 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 69-226
Cow position: chr11:20602334-20602175 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 131
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 139, 61

Conread position: 70-176
Cow position: chr11:1142731-1142837 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 70-176
Cow position: chr11:46499118-46499011 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 70-225
Cow position: chr11:83033133-83033285 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 150, 48

Conread position: 71-188
Cow position: chr11:3769203-3769320 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 71-231
Cow position: chr11:71341359-71341522 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 143, 0

Conread position: 72-231
Cow position: chr11:52983779-52983620 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 148, 21

Conread position: 73-216
Cow position: chr11:8840651-8840786 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 8, 44

Conread position: 73-218
Cow position: chr11:64351687-64351832 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 73-221
Cow position: chr11:27722497-27722348 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 73-221
Cow position: chr11:36799204-36799351 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 124
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 73-222
Cow position: chr11:33345549-33345400 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 73-228
Cow position: chr11:56821138-56821298 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 157

Conread position: 74-184
Cow position: chr11:1955787-1955896 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 74-201
Cow position: chr11:10127559-10127687 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 74-220
Cow position: chr11:80761274-80761422 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 5, 80

Conread position: 74-222
Cow position: chr11:77118803-77118659 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 90

Conread position: 76-217
Cow position: chr11:58400350-58400212 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 91

Conread position: 76-221
Cow position: chr11:21910526-21910671 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 76-229
Cow position: chr11:1157744-1157593 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 76-231
Cow position: chr11:18572901-18572746 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 145, 102

Conread position: 77-189
Cow position: chr11:65842975-65843086 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 77-222
Cow position: chr11:19586559-19586413 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 77-228
Cow position: chr11:7414776-7414923 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 77-231
Cow position: chr11:8147799-8147954 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 139, 130

Conread position: 78-216
Cow position: chr11:44636656-44636794 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 130, 11

Conread position: 78-218
Cow position: chr11:15373938-15373797 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 123
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 28, 24

Conread position: 78-218
Cow position: chr11:17278577-17278713 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 78-219
Cow position: chr11:62155737-62155596 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 78-220
Cow position: chr11:76114741-76114603 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 78-222
Cow position: chr11:63919955-63920099 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 78-222
Cow position: chr11:70086431-70086289 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 78-224
Cow position: chr11:45631667-45631807 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 78-225
Cow position: chr11:34963168-34963019 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 133, 77

Conread position: 78-228
Cow position: chr11:81931018-81931163 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 126
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 88, 0

Conread position: 78-229
Cow position: chr11:46953046-46952894 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 142, 0

Conread position: 78-231
Cow position: chr11:30934515-30934366 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 78-231
Cow position: chr11:63482332-63482481 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 129
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 148, 9

Conread position: 79-196
Cow position: chr11:42056204-42056087 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 79-207
Cow position: chr11:16719343-16719215 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 75

Conread position: 79-222
Cow position: chr11:23128442-23128585 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 79-229
Cow position: chr11:77556194-77556044 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 79-231
Cow position: chr11:41809395-41809546 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 145, 0

Conread position: 80-166
Cow position: chr11:63199629-63199543 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 78
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 80-221
Cow position: chr11:18587499-18587640 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 80-227
Cow position: chr11:1362371-1362517 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 144, 0

Conread position: 80-231
Cow position: chr11:40258314-40258465 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 9

Conread position: 81-179
Cow position: chr11:65858178-65858080 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 81-197
Cow position: chr11:68975236-68975124 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 81-218
Cow position: chr11:7307729-7307590 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 57

Conread position: 81-222
Cow position: chr11:16320379-16320241 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 81-222
Cow position: chr11:83579081-83579220 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 81-226
Cow position: chr11:12111363-12111502 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 81-226
Cow position: chr11:18785782-18785918 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 81-226
Cow position: chr11:64867925-64868070 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 81-227
Cow position: chr11:56734724-56734580 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 81-231
Cow position: chr11:5031680-5031830 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 85

Conread position: 82-210
Cow position: chr11:30787318-30787190 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 82-218
Cow position: chr11:21852207-21852343 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 82-221
Cow position: chr11:42043902-42044036 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 82-221
Cow position: chr11:85294336-85294194 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 121

Conread position: 82-222
Cow position: chr11:76606767-76606627 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 82-226
Cow position: chr11:53147437-53147582 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 89

Conread position: 82-231
Cow position: chr11:14466392-14466545 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 0

Conread position: 83-189
Cow position: chr11:48232921-48232815 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 91
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 83-231
Cow position: chr11:30879761-30879622 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 84-215
Cow position: chr11:61130574-61130703 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 85-222
Cow position: chr11:36987041-36986907 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 119, 0

Conread position: 85-231
Cow position: chr11:33527144-33526997 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 86-215
Cow position: chr11:57331891-57331763 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 86-218
Cow position: chr11:55494770-55494638 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 88-226
Cow position: chr11:64638437-64638575 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 132, 79

Conread position: 89-200
Cow position: chr11:40860471-40860582 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 89-211
Cow position: chr11:28168335-28168457 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 89-218
Cow position: chr11:21438296-21438167 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 89-222
Cow position: chr11:48512251-48512119 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 89-230
Cow position: chr11:77546503-77546362 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 89-231
Cow position: chr11:33341057-33341202 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 130, 0

Conread position: 89-231
Cow position: chr11:48306259-48306402 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 90-215
Cow position: chr11:18608151-18608276 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 90-231
Cow position: chr11:45897962-45898109 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 91-225
Cow position: chr11:34106584-34106720 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 118
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 128, 0

Conread position: 93-216
Cow position: chr11:17946816-17946937 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 93-221
Cow position: chr11:56654639-56654511 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 94-203
Cow position: chr11:79869334-79869222 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 96-225
Cow position: chr11:75965571-75965700 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 100-231
Cow position: chr11:41175871-41176006 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 101-220
Cow position: chr11:71482455-71482336 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 105
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 101-222
Cow position: chr11:55203384-55203505 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 108-229
Cow position: chr11:70273375-70273254 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 109-231
Cow position: chr11:18340973-18341097 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 111, 71

Conread position: 112-222
Cow position: chr11:65624729-65624838 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 94
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 119-231
Cow position: chr11:61858845-61858958 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 128-222
Cow position: chr11:17515489-17515395 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 128-226
Cow position: chr11:30597042-30596944 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 135-231
Cow position: chr11:38877554-38877458 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 140-231
Cow position: chr11:27386302-27386397 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Show alignments to all cow chromosomes.