Cow genome map

Conread name: ramn3524b_e9.y1

Conread position: 1-108
Cow position: chr21:18355454-18355346 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 1-181
Cow position: chr21:8506293-8506469 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 1-181
Cow position: chr21:8509181-8509357 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 1-182
Cow position: chr21:19826475-19826294 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1-182
Cow position: chr21:42355895-42355706 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 1-189
Cow position: chr21:17302760-17302572 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-189
Cow position: chr21:42189506-42189688 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 159, 79

Conread position: 1-207
Cow position: chr21:8978723-8978500 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 50, 195

Conread position: 1-211
Cow position: chr21:28237445-28237659 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 152

Conread position: 1-216
Cow position: chr21:19161969-19161754 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 1-218
Cow position: chr21:71840-71627 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 78, 0

Conread position: 1-218
Cow position: chr21:7066131-7066341 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 1-222
Cow position: chr21:3360762-3360977 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 147, 80

Conread position: 1-228
Cow position: chr21:6317431-6317652 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 175, 0

Conread position: 1-231
Cow position: chr21:5427181-5426966 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 218, 58

Conread position: 1-231
Cow position: chr21:10561331-10561559 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 215, 63

Conread position: 1-231
Cow position: chr21:13589016-13588788 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 97

Conread position: 2-115
Cow position: chr21:12293276-12293164 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 20

Conread position: 2-131
Cow position: chr21:34209761-34209889 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 2-145
Cow position: chr21:17857018-17856878 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 2-145
Cow position: chr21:40846763-40846621 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 98, 44

Conread position: 2-161
Cow position: chr21:6042042-6041881 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 2-164
Cow position: chr21:45446791-45446629 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 156

Conread position: 2-168
Cow position: chr21:7460858-7460697 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 2-168
Cow position: chr21:32272183-32272010 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 64, 98

Conread position: 2-169
Cow position: chr21:7357798-7357631 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-175
Cow position: chr21:1464596-1464426 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 2-175
Cow position: chr21:4584900-4585073 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 2-176
Cow position: chr21:10450093-10450266 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 2-181
Cow position: chr21:15545109-15545284 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 117

Conread position: 2-187
Cow position: chr21:21167980-21167795 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 89, 97

Conread position: 2-188
Cow position: chr21:11099716-11099901 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 28

Conread position: 2-188
Cow position: chr21:14639179-14638994 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 2-188
Cow position: chr21:15869940-15869760 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 72, 0

Conread position: 2-189
Cow position: chr21:29418824-29418639 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 155
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 176, 164

Conread position: 2-191
Cow position: chr21:11006515-11006703 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 151
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 118, 96

Conread position: 2-192
Cow position: chr21:14228642-14228836 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 2-194
Cow position: chr21:27810645-27810454 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 74, 159

Conread position: 2-197
Cow position: chr21:8959746-8959552 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 187, 0

Conread position: 2-200
Cow position: chr21:34738824-34738635 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 165, 23

Conread position: 2-205
Cow position: chr21:646062-646264 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 176, 101

Conread position: 2-207
Cow position: chr21:46776744-46776949 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 134
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 2-211
Cow position: chr21:24858569-24858362 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 75, 0

Conread position: 2-216
Cow position: chr21:27863266-27863471 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 58, 0

Conread position: 2-217
Cow position: chr21:22209990-22210205 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 74, 67

Conread position: 2-218
Cow position: chr21:1562277-1562503 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 2-218
Cow position: chr21:24797908-24797697 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 2-218
Cow position: chr21:39664145-39664358 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 2-218
Cow position: chr21:45151372-45151589 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 119, 0

Conread position: 2-219
Cow position: chr21:2536883-2537100 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-221
Cow position: chr21:42135366-42135579 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 2-222
Cow position: chr21:1511539-1511329 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 2-222
Cow position: chr21:26018634-26018415 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 126, 0

Conread position: 2-222
Cow position: chr21:45970926-45971136 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 2-222
Cow position: chr21:47761024-47760805 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 197, 0

Conread position: 2-223
Cow position: chr21:957922-957708 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 171
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 57, 0

Conread position: 2-225
Cow position: chr21:6583887-6584104 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 85, 0

Conread position: 2-225
Cow position: chr21:18568384-18568606 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 2-225
Cow position: chr21:29001893-29002123 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 104

Conread position: 2-225
Cow position: chr21:43388614-43388385 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 86

Conread position: 2-225
Cow position: chr21:44591950-44592176 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 52, 22

Conread position: 2-226
Cow position: chr21:12461716-12461936 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 28, 70

Conread position: 2-227
Cow position: chr21:40589227-40589453 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 181, 72

Conread position: 2-229
Cow position: chr21:12154378-12154160 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 167, 72

Conread position: 2-231
Cow position: chr21:3763498-3763715 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 2-231
Cow position: chr21:4281630-4281848 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 2-231
Cow position: chr21:5898156-5898377 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 217, 9

Conread position: 2-231
Cow position: chr21:13889401-13889621 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 218, 91

Conread position: 2-231
Cow position: chr21:19702983-19702758 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 179, 55

Conread position: 2-231
Cow position: chr21:21907188-21907402 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 181
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 14, 61

Conread position: 2-231
Cow position: chr21:30256004-30256244 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 74, 154

Conread position: 2-231
Cow position: chr21:39888473-39888721 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 242

Conread position: 3-123
Cow position: chr21:41829126-41829246 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-123
Cow position: chr21:42227445-42227564 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 104
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 3-124
Cow position: chr21:40821643-40821761 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 3-124
Cow position: chr21:49144748-49144869 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-127
Cow position: chr21:37014173-37014297 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-133
Cow position: chr21:48242798-48242931 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 3-141
Cow position: chr21:30359098-30359228 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 3-145
Cow position: chr21:19339978-19340119 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 76, 64

Conread position: 3-147
Cow position: chr21:12473810-12473949 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 3-148
Cow position: chr21:15444830-15444975 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 3-148
Cow position: chr21:42920748-42920894 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 137

Conread position: 3-151
Cow position: chr21:11706513-11706660 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 3-153
Cow position: chr21:5345133-5344983 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-154
Cow position: chr21:42047788-42047938 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 3-155
Cow position: chr21:21772344-21772192 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-158
Cow position: chr21:16119910-16120061 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 3-158
Cow position: chr21:18495467-18495321 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 3-158
Cow position: chr21:39810312-39810158 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 3-159
Cow position: chr21:3379501-3379653 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 34, 60

Conread position: 3-159
Cow position: chr21:19176496-19176341 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 3-160
Cow position: chr21:32536643-32536494 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 3-162
Cow position: chr21:10829615-10829774 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-164
Cow position: chr21:34723063-34722903 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 19

Conread position: 3-166
Cow position: chr21:40930224-40930383 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 3-167
Cow position: chr21:37495692-37495855 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 138, 53

Conread position: 3-168
Cow position: chr21:6292001-6291836 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 139
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 3-168
Cow position: chr21:28882435-28882271 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 138
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 83, 0

Conread position: 3-168
Cow position: chr21:29011724-29011880 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 137, 72

Conread position: 3-169
Cow position: chr21:3135616-3135780 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 138
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 19, 0

Conread position: 3-169
Cow position: chr21:8523885-8523730 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 3-169
Cow position: chr21:27568146-27567983 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 0

Conread position: 3-169
Cow position: chr21:41437864-41437697 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 3-169
Cow position: chr21:47860853-47860687 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 12

Conread position: 3-171
Cow position: chr21:58699-58537 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 131

Conread position: 3-171
Cow position: chr21:21159055-21158898 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 3-172
Cow position: chr21:4269189-4269030 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 146, 12

Conread position: 3-173
Cow position: chr21:8558223-8558389 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 16, 66

Conread position: 3-173
Cow position: chr21:31278440-31278268 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 125, 111

Conread position: 3-174
Cow position: chr21:16790240-16790061 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 3-174
Cow position: chr21:40551490-40551659 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 149, 23

Conread position: 3-175
Cow position: chr21:874777-874605 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 3-176
Cow position: chr21:19220543-19220716 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-176
Cow position: chr21:22720819-22720654 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 97

Conread position: 3-176
Cow position: chr21:24611519-24611691 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 3-176
Cow position: chr21:33169850-33169680 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 101

Conread position: 3-176
Cow position: chr21:41738160-41737990 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 3-178
Cow position: chr21:45376199-45376031 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 3-179
Cow position: chr21:10660639-10660814 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 3-179
Cow position: chr21:30970187-30970014 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 73, 31

Conread position: 3-180
Cow position: chr21:16797104-16796928 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 148
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 85, 19

Conread position: 3-180
Cow position: chr21:39278040-39278219 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 3-181
Cow position: chr21:8494895-8494717 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 96

Conread position: 3-182
Cow position: chr21:10576488-10576311 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 3-182
Cow position: chr21:15305043-15305223 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 62, 0

Conread position: 3-183
Cow position: chr21:20193225-20193045 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 3-184
Cow position: chr21:44732791-44732969 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 77

Conread position: 3-185
Cow position: chr21:14247388-14247208 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 3-185
Cow position: chr21:32647934-32648116 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 3-185
Cow position: chr21:46627491-46627325 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 19

Conread position: 3-186
Cow position: chr21:874576-874393 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-186
Cow position: chr21:10587232-10587415 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-186
Cow position: chr21:18578316-18578490 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 3-186
Cow position: chr21:34737413-34737238 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 3-187
Cow position: chr21:4109029-4108846 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 150
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 3-188
Cow position: chr21:790055-790243 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 90, 159

Conread position: 3-188
Cow position: chr21:12349020-12348835 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 3-189
Cow position: chr21:7201403-7201218 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 3-189
Cow position: chr21:26828719-26828902 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 156, 0

Conread position: 3-191
Cow position: chr21:11182801-11182620 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 3-192
Cow position: chr21:438808-438631 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 3-192
Cow position: chr21:8986278-8986088 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 73, 159

Conread position: 3-192
Cow position: chr21:34833826-34834014 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 48, 124

Conread position: 3-193
Cow position: chr21:5218960-5218767 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 143, 72

Conread position: 3-193
Cow position: chr21:22211508-22211318 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 3-193
Cow position: chr21:38482634-38482448 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 61

Conread position: 3-194
Cow position: chr21:24351103-24350916 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 88, 134

Conread position: 3-195
Cow position: chr21:40457860-40457665 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 57, 46

Conread position: 3-196
Cow position: chr21:745422-745238 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 3-196
Cow position: chr21:30658113-30657932 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 3-198
Cow position: chr21:20174564-20174378 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 3-199
Cow position: chr21:48482278-48482469 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 55, 0

Conread position: 3-200
Cow position: chr21:45684073-45683870 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 88

Conread position: 3-202
Cow position: chr21:24296513-24296712 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 122, 104

Conread position: 3-202
Cow position: chr21:31658902-31659091 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 55, 0

Conread position: 3-203
Cow position: chr21:16604062-16604262 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-203
Cow position: chr21:25012330-25012137 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 3-203
Cow position: chr21:41590314-41590510 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 72, 0

Conread position: 3-204
Cow position: chr21:26392179-26391978 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 3-204
Cow position: chr21:26735649-26735463 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 3-205
Cow position: chr21:13090629-13090427 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 3-205
Cow position: chr21:26034082-26033880 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-205
Cow position: chr21:38943356-38943566 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 39

Conread position: 3-206
Cow position: chr21:15201005-15200809 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 3-206
Cow position: chr21:30145381-30145576 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 3-207
Cow position: chr21:700537-700741 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-207
Cow position: chr21:13817649-13817443 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 109

Conread position: 3-207
Cow position: chr21:17842743-17842946 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 112, 0

Conread position: 3-207
Cow position: chr21:19868710-19868904 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 3-207
Cow position: chr21:22851167-22850972 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 3-207
Cow position: chr21:27711982-27712192 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 3-208
Cow position: chr21:82311-82117 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 3-208
Cow position: chr21:41043065-41043269 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 3-210
Cow position: chr21:8240564-8240360 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 140
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 159

Conread position: 3-210
Cow position: chr21:13304047-13303840 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-210
Cow position: chr21:18720853-18721057 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 140, 0

Conread position: 3-210
Cow position: chr21:35084342-35084550 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 85

Conread position: 3-212
Cow position: chr21:29213907-29214114 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 8

Conread position: 3-212
Cow position: chr21:44825623-44825843 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 54, 46

Conread position: 3-215
Cow position: chr21:13225969-13225758 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 3-215
Cow position: chr21:30938414-30938629 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 58

Conread position: 3-216
Cow position: chr21:13674398-13674610 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 3-216
Cow position: chr21:31246523-31246306 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 166, 126

Conread position: 3-217
Cow position: chr21:742526-742328 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 3-217
Cow position: chr21:8430845-8431059 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-217
Cow position: chr21:15012683-15012482 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 3-217
Cow position: chr21:17519280-17519061 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 55, 0

Conread position: 3-218
Cow position: chr21:5970594-5970799 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 186, 54

Conread position: 3-218
Cow position: chr21:8349574-8349371 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 3-218
Cow position: chr21:10004631-10004845 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 71

Conread position: 3-218
Cow position: chr21:10264287-10264073 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 3-218
Cow position: chr21:10423362-10423148 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 54

Conread position: 3-218
Cow position: chr21:12739340-12739120 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 117

Conread position: 3-218
Cow position: chr21:13047938-13048153 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-218
Cow position: chr21:13713585-13713800 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-218
Cow position: chr21:15271187-15271407 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 178, 18

Conread position: 3-218
Cow position: chr21:15584171-15584379 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 3-218
Cow position: chr21:16082860-16083077 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 3-218
Cow position: chr21:17193496-17193711 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 83

Conread position: 3-218
Cow position: chr21:18155312-18155526 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 3-218
Cow position: chr21:20153209-20152996 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 103

Conread position: 3-218
Cow position: chr21:21969066-21968851 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 3-218
Cow position: chr21:28792665-28792446 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 170, 0

Conread position: 3-218
Cow position: chr21:29069071-29069287 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 154, 0

Conread position: 3-218
Cow position: chr21:30980307-30980537 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 63, 168

Conread position: 3-218
Cow position: chr21:36795876-36795643 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 3-218
Cow position: chr21:38918454-38918244 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 79, 164

Conread position: 3-219
Cow position: chr21:13584800-13585020 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 73, 186

Conread position: 3-219
Cow position: chr21:27568907-27569130 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 54, 163

Conread position: 3-219
Cow position: chr21:32392810-32393018 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 73, 124

Conread position: 3-220
Cow position: chr21:17874938-17875155 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 3-220
Cow position: chr21:32559119-32559325 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 40, 67

Conread position: 3-220
Cow position: chr21:36765563-36765784 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 146
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 186, 0

Conread position: 3-220
Cow position: chr21:37299712-37299500 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 3-221
Cow position: chr21:8924623-8924401 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 173, 37

Conread position: 3-221
Cow position: chr21:11644714-11644929 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 78, 0

Conread position: 3-221
Cow position: chr21:13089219-13089431 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 70, 18

Conread position: 3-221
Cow position: chr21:23535965-23535748 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 193

Conread position: 3-221
Cow position: chr21:30835618-30835403 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 3-221
Cow position: chr21:34010144-34010357 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 3-221
Cow position: chr21:34654322-34654111 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 3-221
Cow position: chr21:41580007-41579793 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 112, 45

Conread position: 3-221
Cow position: chr21:41621380-41621162 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-222
Cow position: chr21:3585112-3585332 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 80

Conread position: 3-222
Cow position: chr21:7169939-7169723 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 147
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 200, 56

Conread position: 3-222
Cow position: chr21:8207009-8206808 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 3-222
Cow position: chr21:11353316-11353098 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 175
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 10, 185

Conread position: 3-222
Cow position: chr21:11739867-11740083 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 3-222
Cow position: chr21:16152692-16152476 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 73

Conread position: 3-222
Cow position: chr21:20213519-20213741 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 3-222
Cow position: chr21:23568477-23568260 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 56

Conread position: 3-222
Cow position: chr21:24343013-24343231 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 3-222
Cow position: chr21:28244719-28244507 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 3-222
Cow position: chr21:28919279-28919487 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 3-222
Cow position: chr21:29014665-29014874 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 57, 0

Conread position: 3-222
Cow position: chr21:30231444-30231658 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 3-222
Cow position: chr21:30592062-30592268 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 3-222
Cow position: chr21:31759974-31760177 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 3-222
Cow position: chr21:36022935-36023156 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 205, 0

Conread position: 3-222
Cow position: chr21:37837826-37838030 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 0

Conread position: 3-222
Cow position: chr21:40266376-40266161 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 3-222
Cow position: chr21:40432716-40432481 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 62, 0

Conread position: 3-222
Cow position: chr21:41974115-41974338 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 59, 171

Conread position: 3-222
Cow position: chr21:42562901-42562668 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 59, 175

Conread position: 3-222
Cow position: chr21:46848881-46849091 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 3-222
Cow position: chr21:47363472-47363700 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 73, 44

Conread position: 3-222
Cow position: chr21:47719053-47719263 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 3-223
Cow position: chr21:938273-938056 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 54, 0

Conread position: 3-223
Cow position: chr21:45906369-45906587 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 147
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 151, 78

Conread position: 3-224
Cow position: chr21:641836-641621 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 0

Conread position: 3-224
Cow position: chr21:30848696-30848912 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 195, 65

Conread position: 3-224
Cow position: chr21:36682578-36682359 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 73, 27

Conread position: 3-224
Cow position: chr21:43693069-43692850 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 137, 32

Conread position: 3-225
Cow position: chr21:47299-47073 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 3-225
Cow position: chr21:8426695-8426478 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 26, 71

Conread position: 3-225
Cow position: chr21:10656849-10657070 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 189, 102

Conread position: 3-225
Cow position: chr21:10673362-10673152 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 99, 57

Conread position: 3-225
Cow position: chr21:13842745-13842522 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 92, 0

Conread position: 3-225
Cow position: chr21:17638147-17637925 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-225
Cow position: chr21:19561312-19561535 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 141, 0

Conread position: 3-225
Cow position: chr21:23587124-23586915 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 3-225
Cow position: chr21:27677735-27677515 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 154

Conread position: 3-225
Cow position: chr21:28030531-28030321 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 217, 26

Conread position: 3-225
Cow position: chr21:37706160-37706382 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 72

Conread position: 3-225
Cow position: chr21:38728408-38728187 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 3-225
Cow position: chr21:40475753-40475532 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 0

Conread position: 3-225
Cow position: chr21:42501304-42501077 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 162, 78

Conread position: 3-225
Cow position: chr21:47713755-47713971 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 71

Conread position: 3-226
Cow position: chr21:8713705-8713927 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 206, 0

Conread position: 3-226
Cow position: chr21:14126524-14126315 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 3-226
Cow position: chr21:17252725-17252948 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 210, 84

Conread position: 3-226
Cow position: chr21:22861244-22861032 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 217, 54

Conread position: 3-226
Cow position: chr21:44251589-44251811 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 3-226
Cow position: chr21:47464867-47465087 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 217, 65

Conread position: 3-227
Cow position: chr21:6051757-6051534 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 75

Conread position: 3-227
Cow position: chr21:13462970-13462744 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 166, 19

Conread position: 3-227
Cow position: chr21:17516062-17515838 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 202, 142

Conread position: 3-227
Cow position: chr21:19059839-19060058 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 3-227
Cow position: chr21:22121754-22121540 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 215, 56

Conread position: 3-227
Cow position: chr21:31279505-31279286 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 217, 74

Conread position: 3-227
Cow position: chr21:32297256-32297487 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 229

Conread position: 3-227
Cow position: chr21:44724124-44724337 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 0

Conread position: 3-227
Cow position: chr21:46599610-46599392 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 3-228
Cow position: chr21:1764606-1764836 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 73, 48

Conread position: 3-228
Cow position: chr21:17184170-17183951 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 53

Conread position: 3-229
Cow position: chr21:14464838-14464609 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 3-230
Cow position: chr21:13580667-13580440 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 222, 90

Conread position: 3-230
Cow position: chr21:13656382-13656607 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 108, 0

Conread position: 3-230
Cow position: chr21:28733660-28733887 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 217, 12

Conread position: 3-231
Cow position: chr21:868667-868900 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-231
Cow position: chr21:6834302-6834076 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 83, 0

Conread position: 3-231
Cow position: chr21:6851417-6851197 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 216, 72

Conread position: 3-231
Cow position: chr21:8545768-8545992 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 173

Conread position: 3-231
Cow position: chr21:9301477-9301243 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 192, 72

Conread position: 3-231
Cow position: chr21:11027106-11027327 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 3-231
Cow position: chr21:11625998-11625772 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 220, 0

Conread position: 3-231
Cow position: chr21:12916166-12916395 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 217, 0

Conread position: 3-231
Cow position: chr21:15543987-15544192 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 3-231
Cow position: chr21:16794046-16793815 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 91

Conread position: 3-231
Cow position: chr21:17890555-17890327 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 77

Conread position: 3-231
Cow position: chr21:19067785-19067554 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 90

Conread position: 3-231
Cow position: chr21:20160930-20160704 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 3-231
Cow position: chr21:22718531-22718759 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 41

Conread position: 3-231
Cow position: chr21:29658526-29658303 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 100, 72

Conread position: 3-231
Cow position: chr21:30222594-30222372 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 3-231
Cow position: chr21:33413845-33414054 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 56

Conread position: 3-231
Cow position: chr21:33982562-33982780 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 3-231
Cow position: chr21:36910989-36910764 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 154, 55

Conread position: 3-231
Cow position: chr21:38449200-38449421 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 217, 70

Conread position: 3-231
Cow position: chr21:38901015-38900802 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 180
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 57, 0

Conread position: 3-231
Cow position: chr21:41140463-41140690 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 164, 0

Conread position: 3-231
Cow position: chr21:42145071-42144852 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 217, 44

Conread position: 3-231
Cow position: chr21:44113884-44114104 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 216, 69

Conread position: 3-231
Cow position: chr21:48527668-48527436 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 147

Conread position: 4-124
Cow position: chr21:20185498-20185382 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 4-131
Cow position: chr21:42441881-42441754 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 4-132
Cow position: chr21:5476833-5476705 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 48, 59

Conread position: 4-150
Cow position: chr21:31258720-31258574 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 124
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 4-158
Cow position: chr21:8358978-8359125 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 4-163
Cow position: chr21:19180755-19180596 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 4-168
Cow position: chr21:42455109-42454951 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 4-171
Cow position: chr21:45537441-45537271 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 4-174
Cow position: chr21:41193902-41194071 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 4-176
Cow position: chr21:36121480-36121309 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 29

Conread position: 4-181
Cow position: chr21:1283978-1283809 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 4-186
Cow position: chr21:18783215-18783397 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 94, 55

Conread position: 4-187
Cow position: chr21:42131087-42131284 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 4-191
Cow position: chr21:2785250-2785419 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 4-195
Cow position: chr21:14746023-14745833 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 186, 0

Conread position: 4-195
Cow position: chr21:42017350-42017541 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 35

Conread position: 4-202
Cow position: chr21:35801246-35801448 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 83, 96

Conread position: 4-203
Cow position: chr21:8497352-8497551 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 4-208
Cow position: chr21:14360619-14360415 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 4-216
Cow position: chr21:28028050-28027839 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 177, 0

Conread position: 4-217
Cow position: chr21:9278779-9278564 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 149, 209

Conread position: 4-219
Cow position: chr21:5538129-5538324 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 4-220
Cow position: chr21:4400044-4399843 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 4-220
Cow position: chr21:10114082-10114292 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 169
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 66, 0

Conread position: 4-222
Cow position: chr21:22014442-22014226 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 25, 15

Conread position: 4-222
Cow position: chr21:24266310-24266529 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 210

Conread position: 4-222
Cow position: chr21:44829505-44829723 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-224
Cow position: chr21:36763313-36763095 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 4-225
Cow position: chr21:8351043-8351280 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 157, 71

Conread position: 4-225
Cow position: chr21:12310724-12310509 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 212, 43

Conread position: 4-225
Cow position: chr21:14760808-14760607 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 4-225
Cow position: chr21:25345115-25344892 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 4-225
Cow position: chr21:34151827-34151619 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 4-225
Cow position: chr21:41287545-41287761 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 216, 56

Conread position: 4-225
Cow position: chr21:46809513-46809738 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 44

Conread position: 4-226
Cow position: chr21:10859061-10858840 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 154, 0

Conread position: 4-230
Cow position: chr21:26562908-26563131 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 114, 74

Conread position: 4-231
Cow position: chr21:6998192-6997966 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 175, 52

Conread position: 4-231
Cow position: chr21:9311306-9311073 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 179, 0

Conread position: 4-231
Cow position: chr21:14452484-14452259 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 22

Conread position: 5-131
Cow position: chr21:47784845-47784719 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 5-144
Cow position: chr21:40916731-40916597 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 5-155
Cow position: chr21:43655952-43655805 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 5-158
Cow position: chr21:40089514-40089668 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 5-173
Cow position: chr21:24757187-24757026 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 5-176
Cow position: chr21:27744279-27744107 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 52, 86

Conread position: 5-180
Cow position: chr21:7539275-7539450 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 5-182
Cow position: chr21:18450005-18449829 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 145, 0

Conread position: 5-187
Cow position: chr21:30977018-30977185 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 5-189
Cow position: chr21:11743243-11743435 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 5-193
Cow position: chr21:9346677-9346487 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 21, 0

Conread position: 5-197
Cow position: chr21:21940161-21940346 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 5-206
Cow position: chr21:40820601-40820801 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 93, 0

Conread position: 5-207
Cow position: chr21:37928901-37928700 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 5-214
Cow position: chr21:25014790-25014982 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 5-217
Cow position: chr21:38720499-38720293 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 75, 37

Conread position: 5-220
Cow position: chr21:11779288-11779498 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 131

Conread position: 5-222
Cow position: chr21:16498765-16498555 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 5-224
Cow position: chr21:5464997-5464784 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 0

Conread position: 5-225
Cow position: chr21:6713274-6713493 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 166, 76

Conread position: 5-225
Cow position: chr21:41156121-41155898 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 144, 56

Conread position: 5-226
Cow position: chr21:37835836-37835611 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 86, 94

Conread position: 5-227
Cow position: chr21:31652637-31652419 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 141, 0

Conread position: 5-227
Cow position: chr21:32339495-32339709 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 53

Conread position: 5-228
Cow position: chr21:802073-802286 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 56

Conread position: 5-230
Cow position: chr21:33983-33747 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 5-231
Cow position: chr21:16915031-16914800 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 164, 225

Conread position: 5-231
Cow position: chr21:36508480-36508266 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 17, 0

Conread position: 6-153
Cow position: chr21:34727453-34727312 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 118, 0

Conread position: 6-175
Cow position: chr21:19083336-19083503 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 6-181
Cow position: chr21:26454753-26454929 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 6-185
Cow position: chr21:36280542-36280363 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 6-192
Cow position: chr21:43316643-43316829 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 6-214
Cow position: chr21:20117609-20117822 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 17

Conread position: 6-216
Cow position: chr21:40291500-40291704 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 74, 0

Conread position: 6-222
Cow position: chr21:7394618-7394420 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 6-222
Cow position: chr21:7824941-7825155 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 106, 54

Conread position: 6-222
Cow position: chr21:9417895-9418119 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 164

Conread position: 6-225
Cow position: chr21:41917990-41918209 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 59, 32

Conread position: 7-154
Cow position: chr21:48204970-48205117 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 7-187
Cow position: chr21:5214600-5214419 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 147
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 69, 0

Conread position: 7-218
Cow position: chr21:28810027-28810222 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 152, 50

Conread position: 7-222
Cow position: chr21:10410471-10410261 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 7-228
Cow position: chr21:41610427-41610197 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 7-231
Cow position: chr21:49699789-49700011 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 8-156
Cow position: chr21:36398321-36398461 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 8-168
Cow position: chr21:6391591-6391431 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 8-221
Cow position: chr21:828963-829171 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 8-225
Cow position: chr21:42841338-42841566 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 54, 0

Conread position: 9-221
Cow position: chr21:20165886-20165679 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 66, 0

Conread position: 9-222
Cow position: chr21:24060945-24061155 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 145

Conread position: 9-231
Cow position: chr21:17983218-17983005 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 211, 48

Conread position: 9-231
Cow position: chr21:27521095-27521306 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 63

Conread position: 11-137
Cow position: chr21:16099316-16099444 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 11-156
Cow position: chr21:7424769-7424912 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 11-159
Cow position: chr21:19394636-19394784 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 11-189
Cow position: chr21:39269047-39268870 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 11-203
Cow position: chr21:17155704-17155897 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 11-218
Cow position: chr21:37789758-37789959 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 11-224
Cow position: chr21:31253777-31253571 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 66

Conread position: 11-225
Cow position: chr21:10978703-10978915 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 26

Conread position: 11-225
Cow position: chr21:12748992-12749206 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 11-228
Cow position: chr21:41198153-41198369 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 12-181
Cow position: chr21:19014632-19014801 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 12-182
Cow position: chr21:9341712-9341882 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 12-200
Cow position: chr21:14717801-14717991 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 155, 96

Conread position: 12-200
Cow position: chr21:16190526-16190716 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 155, 96

Conread position: 12-218
Cow position: chr21:18493123-18493332 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 132, 74

Conread position: 12-224
Cow position: chr21:18471817-18471612 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 155, 0

Conread position: 12-227
Cow position: chr21:19624647-19624431 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 129, 140

Conread position: 12-227
Cow position: chr21:44074935-44074723 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 159, 0

Conread position: 12-228
Cow position: chr21:46912792-46912576 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 176

Conread position: 13-132
Cow position: chr21:7535302-7535420 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 13-186
Cow position: chr21:20925220-20925406 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 7, 168

Conread position: 13-226
Cow position: chr21:13840571-13840359 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 5, 109

Conread position: 14-218
Cow position: chr21:22005659-22005869 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 167, 0

Conread position: 15-227
Cow position: chr21:6624399-6624187 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 204, 72

Conread position: 17-120
Cow position: chr21:40593455-40593356 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 17-146
Cow position: chr21:41692291-41692162 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 17-184
Cow position: chr21:13985827-13985660 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 17-186
Cow position: chr21:41540695-41540864 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 17-203
Cow position: chr21:19148354-19148165 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 45, 93

Conread position: 17-207
Cow position: chr21:2550464-2550273 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 177, 0

Conread position: 17-222
Cow position: chr21:9819289-9819489 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 17-223
Cow position: chr21:10980597-10980393 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 17-225
Cow position: chr21:9505107-9504899 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 132

Conread position: 17-231
Cow position: chr21:22856458-22856249 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 18-164
Cow position: chr21:42905158-42905304 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 125
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 18-178
Cow position: chr21:20199191-20199352 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 158, 0

Conread position: 19-170
Cow position: chr21:9873558-9873405 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 120, 24

Conread position: 19-183
Cow position: chr21:19248749-19248913 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-218
Cow position: chr21:28191585-28191396 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 155
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 112, 0

Conread position: 19-218
Cow position: chr21:49276373-49276174 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 186, 197

Conread position: 19-222
Cow position: chr21:7377687-7377890 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 21-169
Cow position: chr21:3178082-3177936 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 21-218
Cow position: chr21:7681331-7681139 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 22-193
Cow position: chr21:27409502-27409667 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 141
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 22-197
Cow position: chr21:31038025-31038206 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 105

Conread position: 22-202
Cow position: chr21:6154036-6153857 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 149, 0

Conread position: 22-214
Cow position: chr21:18341455-18341262 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 57, 52

Conread position: 22-218
Cow position: chr21:25127840-25127644 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 22-222
Cow position: chr21:17455618-17455422 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 22-222
Cow position: chr21:39319174-39319374 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 22-225
Cow position: chr21:643556-643357 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 198, 59

Conread position: 22-226
Cow position: chr21:23573570-23573369 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 183, 60

Conread position: 23-181
Cow position: chr21:39681371-39681213 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 60

Conread position: 23-189
Cow position: chr21:13883714-13883550 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 101, 54

Conread position: 23-196
Cow position: chr21:12640705-12640531 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 163, 0

Conread position: 23-231
Cow position: chr21:36177391-36177186 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 24-202
Cow position: chr21:41522177-41522356 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 139

Conread position: 24-216
Cow position: chr21:7221117-7221298 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 46

Conread position: 24-217
Cow position: chr21:10009583-10009782 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 156, 0

Conread position: 26-215
Cow position: chr21:6735964-6736146 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 156
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 26-217
Cow position: chr21:17433038-17433228 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 27-209
Cow position: chr21:40786908-40786727 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 29-159
Cow position: chr21:15413967-15414095 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 29-162
Cow position: chr21:9590766-9590635 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 89, 48

Conread position: 29-175
Cow position: chr21:3015959-3016103 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 135, 41

Conread position: 29-199
Cow position: chr21:40059251-40059087 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 150, 33

Conread position: 29-207
Cow position: chr21:30243459-30243630 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 29-222
Cow position: chr21:19259042-19258858 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 29-225
Cow position: chr21:7768661-7768471 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 44, 0

Conread position: 29-229
Cow position: chr21:29978538-29978731 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 0

Conread position: 29-231
Cow position: chr21:9416476-9416274 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 163
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 124, 48

Conread position: 29-231
Cow position: chr21:17642763-17642958 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 163
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 191, 32

Conread position: 29-231
Cow position: chr21:42007233-42007437 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 161
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 187, 156

Conread position: 29-231
Cow position: chr21:47763891-47764090 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 30-169
Cow position: chr21:13134827-13134690 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 30-198
Cow position: chr21:13043800-13043961 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 166, 32

Conread position: 30-227
Cow position: chr21:18790330-18790530 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 117

Conread position: 30-227
Cow position: chr21:34049661-34049852 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 147, 0

Conread position: 31-226
Cow position: chr21:20318743-20318546 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 134

Conread position: 31-230
Cow position: chr21:27145764-27145963 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 48, 41

Conread position: 34-217
Cow position: chr21:22313658-22313475 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 124

Conread position: 36-220
Cow position: chr21:976921-977110 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 79, 41

Conread position: 37-199
Cow position: chr21:5406048-5405875 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 37-218
Cow position: chr21:10633421-10633597 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 8, 45

Conread position: 37-224
Cow position: chr21:21169275-21169458 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 129, 0

Conread position: 37-226
Cow position: chr21:8549901-8549714 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 38-189
Cow position: chr21:17410129-17410280 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 39-218
Cow position: chr21:9990727-9990551 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 39-220
Cow position: chr21:33350964-33350776 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 39-231
Cow position: chr21:45329738-45329920 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 171, 38

Conread position: 44-221
Cow position: chr21:17710848-17710673 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 45-218
Cow position: chr21:2658024-2657849 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 45-231
Cow position: chr21:3818423-3818236 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 32, 70

Conread position: 48-230
Cow position: chr21:31159605-31159430 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 154
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 28, 11

Conread position: 48-231
Cow position: chr21:38121311-38121125 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 23, 16

Conread position: 49-214
Cow position: chr21:13726355-13726520 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 26

Conread position: 51-218
Cow position: chr21:40168418-40168585 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 12, 103

Conread position: 51-226
Cow position: chr21:30119901-30119726 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 54-186
Cow position: chr21:30622841-30622711 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 55-218
Cow position: chr21:11057678-11057838 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 55-225
Cow position: chr21:46470386-46470219 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 104, 0

Conread position: 55-226
Cow position: chr21:19359973-19360146 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 163, 0

Conread position: 55-229
Cow position: chr21:24642713-24642548 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 165, 21

Conread position: 55-231
Cow position: chr21:734792-734622 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 55-231
Cow position: chr21:42384712-42384535 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 33, 0

Conread position: 58-189
Cow position: chr21:19936674-19936809 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 60-216
Cow position: chr21:27429649-27429501 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 60-222
Cow position: chr21:45920865-45921022 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 60-228
Cow position: chr21:41598009-41597842 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 143
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 60-231
Cow position: chr21:28924308-28924136 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 144
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 26, 0

Conread position: 60-231
Cow position: chr21:30606899-30607063 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 82, 13

Conread position: 62-150
Cow position: chr21:19657816-19657728 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 77
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 62-163
Cow position: chr21:48478704-48478803 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 62-166
Cow position: chr21:19665706-19665810 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 62-221
Cow position: chr21:713139-712979 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 133
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 0

Conread position: 62-221
Cow position: chr21:3400636-3400796 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 136, 90

Conread position: 62-221
Cow position: chr21:13365536-13365380 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 62-224
Cow position: chr21:26245110-26244948 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 132
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 62-226
Cow position: chr21:7581709-7581874 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 154, 0

Conread position: 62-228
Cow position: chr21:10118762-10118590 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 25

Conread position: 62-229
Cow position: chr21:1591743-1591581 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 155, 38

Conread position: 62-231
Cow position: chr21:11360222-11360061 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 157, 53

Conread position: 62-231
Cow position: chr21:23321882-23322052 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 154, 0

Conread position: 62-231
Cow position: chr21:29014366-29014533 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 139, 19

Conread position: 63-174
Cow position: chr21:40305139-40305027 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 63-181
Cow position: chr21:16927910-16928029 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 63-203
Cow position: chr21:5130177-5130313 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 63-211
Cow position: chr21:5341898-5342047 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 63-218
Cow position: chr21:13164054-13163899 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 133
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 63-222
Cow position: chr21:30157611-30157769 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 63-225
Cow position: chr21:42463499-42463655 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 40, 95

Conread position: 63-227
Cow position: chr21:10538060-10538224 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 63-231
Cow position: chr21:43259416-43259246 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 12, 54

Conread position: 64-186
Cow position: chr21:35252640-35252519 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 106, 15

Conread position: 64-208
Cow position: chr21:14228084-14228230 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 64-222
Cow position: chr21:8213089-8213243 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 152, 11

Conread position: 64-222
Cow position: chr21:12801555-12801713 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 25

Conread position: 64-225
Cow position: chr21:46612603-46612761 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 65-202
Cow position: chr21:265815-265680 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 65-224
Cow position: chr21:13127906-13128063 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 65-231
Cow position: chr21:18779783-18779945 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 160, 118

Conread position: 66-185
Cow position: chr21:7686620-7686735 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 66-197
Cow position: chr21:41051081-41050950 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 66

Conread position: 66-217
Cow position: chr21:28989804-28989651 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 15

Conread position: 66-222
Cow position: chr21:40769484-40769329 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 69-176
Cow position: chr21:28617977-28617870 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 69-221
Cow position: chr21:22939959-22939804 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 69-231
Cow position: chr21:15976821-15976657 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 136
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 147, 61

Conread position: 69-231
Cow position: chr21:28429631-28429467 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 12

Conread position: 70-223
Cow position: chr21:42413910-42414063 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 105, 7

Conread position: 73-221
Cow position: chr21:26647831-26647971 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 73-231
Cow position: chr21:25764820-25764663 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 73-231
Cow position: chr21:26753677-26753520 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 127

Conread position: 74-218
Cow position: chr21:5153805-5153661 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 5, 20

Conread position: 74-221
Cow position: chr21:44671928-44671782 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 73

Conread position: 74-227
Cow position: chr21:27081228-27081078 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 128
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 24, 85

Conread position: 77-186
Cow position: chr21:43276123-43276014 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 77-202
Cow position: chr21:21077781-21077658 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 77-225
Cow position: chr21:2809984-2810128 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 140, 12

Conread position: 78-169
Cow position: chr21:4190290-4190199 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 57

Conread position: 78-185
Cow position: chr21:26658802-26658909 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 78-189
Cow position: chr21:43336786-43336675 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 78-189
Cow position: chr21:43362210-43362099 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 78-198
Cow position: chr21:8686963-8687083 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 103
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 78-221
Cow position: chr21:13395778-13395628 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 78-222
Cow position: chr21:46451774-46451916 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 78-226
Cow position: chr21:7584030-7583882 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 78-231
Cow position: chr21:396047-395896 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 130
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 93, 0

Conread position: 78-231
Cow position: chr21:10001255-10001101 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 128
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 71, 78

Conread position: 78-231
Cow position: chr21:41827978-41828141 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 79-181
Cow position: chr21:37361063-37361165 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 79-218
Cow position: chr21:38440438-38440299 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 79-222
Cow position: chr21:25383205-25383060 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 79-225
Cow position: chr21:17063101-17062957 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 81

Conread position: 79-226
Cow position: chr21:41046985-41046837 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 134, 88

Conread position: 80-218
Cow position: chr21:6758521-6758384 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 80-223
Cow position: chr21:42236624-42236484 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 29

Conread position: 80-228
Cow position: chr21:45473580-45473729 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 142, 0

Conread position: 81-176
Cow position: chr21:43642715-43642619 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 81-231
Cow position: chr21:6388176-6388027 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 143, 0

Conread position: 82-176
Cow position: chr21:38953607-38953512 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 82-227
Cow position: chr21:27624874-27624729 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 143

Conread position: 82-230
Cow position: chr21:471850-471704 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 82-231
Cow position: chr21:33563179-33563035 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 83-228
Cow position: chr21:44860944-44861083 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 84-193
Cow position: chr21:27406070-27406179 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 84-198
Cow position: chr21:19927093-19927204 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 51

Conread position: 84-208
Cow position: chr21:38267888-38268012 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 84-231
Cow position: chr21:8235388-8235529 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 136, 76

Conread position: 84-231
Cow position: chr21:37344927-37345071 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 109, 0

Conread position: 85-218
Cow position: chr21:12207629-12207762 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 86-218
Cow position: chr21:44214298-44214167 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 89-213
Cow position: chr21:35647659-35647783 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 89-225
Cow position: chr21:15911569-15911434 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 130, 71

Conread position: 90-218
Cow position: chr21:32237447-32237322 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 90-231
Cow position: chr21:42209461-42209600 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 126, 0

Conread position: 92-218
Cow position: chr21:36789962-36789835 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 92-231
Cow position: chr21:23460299-23460164 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 93-209
Cow position: chr21:8430570-8430686 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 53

Conread position: 93-222
Cow position: chr21:8231513-8231641 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 100-217
Cow position: chr21:33418966-33419080 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 8, 67

Conread position: 103-231
Cow position: chr21:13738707-13738587 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 103-231
Cow position: chr21:17695512-17695635 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 109-231
Cow position: chr21:34390826-34390949 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 111, 0

Conread position: 110-222
Cow position: chr21:43357108-43357218 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 0

Show alignments to all cow chromosomes.