Non-Coding RNA Search

Cow genome map


           Conread name:
           ramn3524b_e9.y1
        

               Conread position:
               1-116
               

               Cow position:
               chr29:35663727-35663843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-145
               

               Cow position:
               chr29:7143488-7143342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-169
               

               Cow position:
               chr29:16735415-16735247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-169
               

               Cow position:
               chr29:23991640-23991807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               1-175
               

               Cow position:
               chr29:20177501-20177687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-178
               

               Cow position:
               chr29:22128053-22127884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               1-182
               

               Cow position:
               chr29:25432643-25432464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               1-185
               

               Cow position:
               chr29:23142143-23142327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               168, 178
               

               Conread position:
               1-189
               

               Cow position:
               chr29:24365708-24365893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               1-201
               

               Cow position:
               chr29:1615116-1614921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr29:6819806-6819603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr29:36781121-36781315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr29:15944750-15944527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr29:16609939-16609715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-227
               

               Cow position:
               chr29:29923387-29923606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-231
               

               Cow position:
               chr29:9709882-9709656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               189, 59
               

               Conread position:
               2-133
               

               Cow position:
               chr29:4741201-4741332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-155
               

               Cow position:
               chr29:16438584-16438742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               74, 91
               

               Conread position:
               2-164
               

               Cow position:
               chr29:18748199-18748362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               62, 45
               

               Conread position:
               2-166
               

               Cow position:
               chr29:10191857-10192013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               2-169
               

               Cow position:
               chr29:30088867-30089032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               2-176
               

               Cow position:
               chr29:22576990-22577163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               2-187
               

               Cow position:
               chr29:8628909-8629094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-188
               

               Cow position:
               chr29:684989-685169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               2-189
               

               Cow position:
               chr29:5953668-5953856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               2-189
               

               Cow position:
               chr29:19187214-19187029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               2-194
               

               Cow position:
               chr29:4441017-4441207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               156
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               167, 77
               

               Conread position:
               2-200
               

               Cow position:
               chr29:19125518-19125314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               2-207
               

               Cow position:
               chr29:5666891-5667097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               137, 171
               

               Conread position:
               2-207
               

               Cow position:
               chr29:33511539-33511744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-212
               

               Cow position:
               chr29:22162076-22162269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               2-218
               

               Cow position:
               chr29:35458581-35458797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               100, 146
               

               Conread position:
               2-219
               

               Cow position:
               chr29:44937807-44938017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               58, 115
               

               Conread position:
               2-221
               

               Cow position:
               chr29:396590-396384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               2-221
               

               Cow position:
               chr29:9721490-9721272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               2-221
               

               Cow position:
               chr29:18449950-18450164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               2-221
               

               Cow position:
               chr29:26540352-26540569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               2-222
               

               Cow position:
               chr29:25944106-25944333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               2-222
               

               Cow position:
               chr29:31674819-31674603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               2-225
               

               Cow position:
               chr29:5789203-5788996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               2-225
               

               Cow position:
               chr29:7955800-7956023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               86, 124
               

               Conread position:
               2-225
               

               Cow position:
               chr29:29588737-29588959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               2-225
               

               Cow position:
               chr29:40791485-40791277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               2-226
               

               Cow position:
               chr29:11434300-11434085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               2-226
               

               Cow position:
               chr29:38581180-38580946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               54, 164
               

               Conread position:
               2-228
               

               Cow position:
               chr29:21645505-21645280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               60, 129
               

               Conread position:
               2-231
               

               Cow position:
               chr29:2262793-2263033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               66, 169
               

               Conread position:
               2-231
               

               Cow position:
               chr29:8292725-8292956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               127, 182
               

               Conread position:
               2-231
               

               Cow position:
               chr29:35405602-35405830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               216, 166
               

               Conread position:
               2-231
               

               Cow position:
               chr29:42771841-42771607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 129
               

               Conread position:
               2-231
               

               Cow position:
               chr29:44378219-44378455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 153
               

               Conread position:
               3-112
               

               Cow position:
               chr29:6716325-6716434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-117
               

               Cow position:
               chr29:31835455-31835347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               3-124
               

               Cow position:
               chr29:26777197-26777076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-131
               

               Cow position:
               chr29:34483438-34483567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               3-133
               

               Cow position:
               chr29:20644104-20643974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               91, 14
               

               Conread position:
               3-137
               

               Cow position:
               chr29:8841262-8841390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-138
               

               Cow position:
               chr29:27882029-27881896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               3-140
               

               Cow position:
               chr29:35281659-35281516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               3-151
               

               Cow position:
               chr29:11685356-11685208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-155
               

               Cow position:
               chr29:7040681-7040835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-156
               

               Cow position:
               chr29:22776263-22776115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-158
               

               Cow position:
               chr29:2219574-2219421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-158
               

               Cow position:
               chr29:7414681-7414535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               140, 14
               

               Conread position:
               3-158
               

               Cow position:
               chr29:38775802-38775654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-159
               

               Cow position:
               chr29:23678888-23678742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-159
               

               Cow position:
               chr29:25907439-25907279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               73, 57
               

               Conread position:
               3-159
               

               Cow position:
               chr29:33143169-33143321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               3-161
               

               Cow position:
               chr29:34274187-34274348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               3-162
               

               Cow position:
               chr29:38732342-38732183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-164
               

               Cow position:
               chr29:17663571-17663733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               3-166
               

               Cow position:
               chr29:1959768-1959920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               3-166
               

               Cow position:
               chr29:10203956-10203798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               3-166
               

               Cow position:
               chr29:11081207-11081370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-168
               

               Cow position:
               chr29:936390-936231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-168
               

               Cow position:
               chr29:42405136-42404971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-169
               

               Cow position:
               chr29:11894887-11894721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-169
               

               Cow position:
               chr29:35189796-35189630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-174
               

               Cow position:
               chr29:24065872-24065704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               3-174
               

               Cow position:
               chr29:24605083-24604914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               3-175
               

               Cow position:
               chr29:37293214-37293054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               3-175
               

               Cow position:
               chr29:40763509-40763677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               3-176
               

               Cow position:
               chr29:28949172-28948990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 162
               

               Conread position:
               3-176
               

               Cow position:
               chr29:34356158-34355985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 164
               

               Conread position:
               3-176
               

               Cow position:
               chr29:35737130-35737311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               3-176
               

               Cow position:
               chr29:42887158-42886981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               3-179
               

               Cow position:
               chr29:14746965-14746793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               3-179
               

               Cow position:
               chr29:17730756-17730580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-179
               

               Cow position:
               chr29:23819197-23819377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               3-179
               

               Cow position:
               chr29:34675820-34675996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-181
               

               Cow position:
               chr29:14756154-14756330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               3-181
               

               Cow position:
               chr29:20685358-20685180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-181
               

               Cow position:
               chr29:26563634-26563812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               115, 19
               

               Conread position:
               3-181
               

               Cow position:
               chr29:34668879-34669056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               3-183
               

               Cow position:
               chr29:9800846-9800659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               73, 140
               

               Conread position:
               3-183
               

               Cow position:
               chr29:13558524-13558342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-184
               

               Cow position:
               chr29:28087861-28087678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               123, 52
               

               Conread position:
               3-184
               

               Cow position:
               chr29:28715044-28715230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               83, 145
               

               Conread position:
               3-185
               

               Cow position:
               chr29:4648025-4648202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               3-186
               

               Cow position:
               chr29:26539418-26539241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               3-186
               

               Cow position:
               chr29:32215891-32215713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               164, 43
               

               Conread position:
               3-187
               

               Cow position:
               chr29:17436934-17436756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               3-188
               

               Cow position:
               chr29:353609-353794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-188
               

               Cow position:
               chr29:21018557-21018742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-191
               

               Cow position:
               chr29:24026889-24026695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               49, 179
               

               Conread position:
               3-191
               

               Cow position:
               chr29:40350894-40351074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               3-191
               

               Cow position:
               chr29:43088493-43088312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               3-192
               

               Cow position:
               chr29:2730094-2730286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               53, 166
               

               Conread position:
               3-192
               

               Cow position:
               chr29:19420433-19420613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               3-193
               

               Cow position:
               chr29:3711563-3711378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               3-193
               

               Cow position:
               chr29:14577044-14576858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               154
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               3-193
               

               Cow position:
               chr29:18878295-18878482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-193
               

               Cow position:
               chr29:20087193-20087381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               3-193
               

               Cow position:
               chr29:26631236-26631044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               73, 174
               

               Conread position:
               3-193
               

               Cow position:
               chr29:29544714-29544516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               3-193
               

               Cow position:
               chr29:31221929-31221750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               3-194
               

               Cow position:
               chr29:629724-629536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               3-194
               

               Cow position:
               chr29:29578784-29578975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-197
               

               Cow position:
               chr29:15796671-15796481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               3-197
               

               Cow position:
               chr29:15798138-15797947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               3-198
               

               Cow position:
               chr29:4023183-4022998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               3-199
               

               Cow position:
               chr29:23913210-23913400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               3-201
               

               Cow position:
               chr29:20933902-20933703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               152, 113
               

               Conread position:
               3-201
               

               Cow position:
               chr29:42363832-42364026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               143, 54
               

               Conread position:
               3-202
               

               Cow position:
               chr29:4053157-4053350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-203
               

               Cow position:
               chr29:29308395-29308582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               3-207
               

               Cow position:
               chr29:23155422-23155213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               51, 184
               

               Conread position:
               3-207
               

               Cow position:
               chr29:34773562-34773752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               121, 46
               

               Conread position:
               3-209
               

               Cow position:
               chr29:19176728-19176930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               97, 51
               

               Conread position:
               3-210
               

               Cow position:
               chr29:935113-934907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               48, 94
               

               Conread position:
               3-210
               

               Cow position:
               chr29:9378822-9378619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               3-211
               

               Cow position:
               chr29:34760214-34760432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               62, 172
               

               Conread position:
               3-211
               

               Cow position:
               chr29:38754751-38754958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 73
               

               Conread position:
               3-212
               

               Cow position:
               chr29:3293130-3292928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-213
               

               Cow position:
               chr29:30294684-30294886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               3-213
               

               Cow position:
               chr29:34832206-34832406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               50, 105
               

               Conread position:
               3-213
               

               Cow position:
               chr29:42444786-42444586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               3-214
               

               Cow position:
               chr29:22729752-22729545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               201, 75
               

               Conread position:
               3-215
               

               Cow position:
               chr29:501388-501176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               3-215
               

               Cow position:
               chr29:32655907-32656115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               138, 70
               

               Conread position:
               3-215
               

               Cow position:
               chr29:34745474-34745680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               3-216
               

               Cow position:
               chr29:11916008-11915803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               3-216
               

               Cow position:
               chr29:24952874-24952664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               54, 86
               

               Conread position:
               3-217
               

               Cow position:
               chr29:6636265-6636060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               3-217
               

               Cow position:
               chr29:22648034-22647821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               3-217
               

               Cow position:
               chr29:37618495-37618280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr29:3549792-3549577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr29:11227194-11227415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               175, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr29:12900366-12900577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr29:16272931-16272716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr29:16279164-16278962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr29:16290910-16290700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               92, 46
               

               Conread position:
               3-218
               

               Cow position:
               chr29:24187876-24188091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr29:26602387-26602167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               166, 78
               

               Conread position:
               3-218
               

               Cow position:
               chr29:28420944-28420729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 155
               

               Conread position:
               3-218
               

               Cow position:
               chr29:30827595-30827380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr29:31929173-31928963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr29:32656623-32656407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr29:35435046-35434831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr29:36249225-36249011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr29:40117752-40117546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               3-218
               

               Cow position:
               chr29:40610445-40610660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               196, 210
               

               Conread position:
               3-219
               

               Cow position:
               chr29:1011406-1011607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               3-219
               

               Cow position:
               chr29:4423263-4423466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               3-219
               

               Cow position:
               chr29:26259663-26259450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               166, 57
               

               Conread position:
               3-219
               

               Cow position:
               chr29:28979329-28979526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               212, 13
               

               Conread position:
               3-219
               

               Cow position:
               chr29:39329396-39329630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               3-220
               

               Cow position:
               chr29:377250-377468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               149, 157
               

               Conread position:
               3-220
               

               Cow position:
               chr29:7285640-7285435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               3-220
               

               Cow position:
               chr29:8163640-8163855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               3-220
               

               Cow position:
               chr29:9310790-9310572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               35, 156
               

               Conread position:
               3-221
               

               Cow position:
               chr29:5408955-5409170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               3-221
               

               Cow position:
               chr29:16657878-16657665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               182, 59
               

               Conread position:
               3-221
               

               Cow position:
               chr29:31934563-31934350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               3-221
               

               Cow position:
               chr29:35084036-35084251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               3-221
               

               Cow position:
               chr29:41112703-41112908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               3-222
               

               Cow position:
               chr29:1325633-1325413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               41, 82
               

               Conread position:
               3-222
               

               Cow position:
               chr29:4121043-4120824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-222
               

               Cow position:
               chr29:5046840-5046623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 19
               

               Conread position:
               3-222
               

               Cow position:
               chr29:8926263-8926491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               3-222
               

               Cow position:
               chr29:13028637-13028414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               70, 171
               

               Conread position:
               3-222
               

               Cow position:
               chr29:20770531-20770317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               3-222
               

               Cow position:
               chr29:26779063-26778853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               160, 57
               

               Conread position:
               3-222
               

               Cow position:
               chr29:30441126-30440904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 111
               

               Conread position:
               3-222
               

               Cow position:
               chr29:31982009-31981801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               3-222
               

               Cow position:
               chr29:32307378-32307581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               111, 56
               

               Conread position:
               3-222
               

               Cow position:
               chr29:33321536-33321320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               213, 164
               

               Conread position:
               3-222
               

               Cow position:
               chr29:35292273-35292062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 57
               

               Conread position:
               3-222
               

               Cow position:
               chr29:36357315-36357099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               3-223
               

               Cow position:
               chr29:2056247-2056030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               3-223
               

               Cow position:
               chr29:21196465-21196682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               185, 47
               

               Conread position:
               3-223
               

               Cow position:
               chr29:32799516-32799736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               57, 162
               

               Conread position:
               3-224
               

               Cow position:
               chr29:41531038-41530817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 97
               

               Conread position:
               3-225
               

               Cow position:
               chr29:1933383-1933604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               3-225
               

               Cow position:
               chr29:10058356-10058568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               3-225
               

               Cow position:
               chr29:15947356-15947133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 0
               

               Conread position:
               3-225
               

               Cow position:
               chr29:17804717-17804502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-225
               

               Cow position:
               chr29:19762450-19762236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               216, 23
               

               Conread position:
               3-225
               

               Cow position:
               chr29:22720460-22720684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               146, 66
               

               Conread position:
               3-225
               

               Cow position:
               chr29:23874649-23874426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 0
               

               Conread position:
               3-225
               

               Cow position:
               chr29:27668467-27668693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               3-225
               

               Cow position:
               chr29:28813785-28814013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               172, 0
               

               Conread position:
               3-226
               

               Cow position:
               chr29:12680345-12680120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               75, 91
               

               Conread position:
               3-226
               

               Cow position:
               chr29:25092291-25092079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               213, 57
               

               Conread position:
               3-227
               

               Cow position:
               chr29:4624810-4625031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               3-227
               

               Cow position:
               chr29:23698157-23697942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               155, 18
               

               Conread position:
               3-227
               

               Cow position:
               chr29:27911779-27911556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               217, 132
               

               Conread position:
               3-227
               

               Cow position:
               chr29:28195346-28195550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               3-227
               

               Cow position:
               chr29:31489511-31489284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               59, 81
               

               Conread position:
               3-227
               

               Cow position:
               chr29:31786861-31786633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               166, 32
               

               Conread position:
               3-227
               

               Cow position:
               chr29:36220730-36220500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 228
               

               Conread position:
               3-228
               

               Cow position:
               chr29:17462592-17462821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               3-228
               

               Cow position:
               chr29:18200972-18200748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               3-228
               

               Cow position:
               chr29:27926961-27926738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               217, 57
               

               Conread position:
               3-228
               

               Cow position:
               chr29:30227093-30227310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               3-230
               

               Cow position:
               chr29:34358792-34359016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               3-231
               

               Cow position:
               chr29:3685334-3685556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               111, 57
               

               Conread position:
               3-231
               

               Cow position:
               chr29:4492619-4492399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               3-231
               

               Cow position:
               chr29:5063330-5063105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               202, 53
               

               Conread position:
               3-231
               

               Cow position:
               chr29:6337838-6337622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               215, 45
               

               Conread position:
               3-231
               

               Cow position:
               chr29:7310850-7310638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               3-231
               

               Cow position:
               chr29:11612034-11611799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               3-231
               

               Cow position:
               chr29:13373508-13373259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               65, 243
               

               Conread position:
               3-231
               

               Cow position:
               chr29:17297325-17297094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 0
               

               Conread position:
               3-231
               

               Cow position:
               chr29:19756624-19756394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               101, 16
               

               Conread position:
               3-231
               

               Cow position:
               chr29:20167610-20167381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               87, 26
               

               Conread position:
               3-231
               

               Cow position:
               chr29:22690414-22690186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-231
               

               Cow position:
               chr29:34744444-34744662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               217, 19
               

               Conread position:
               3-231
               

               Cow position:
               chr29:40994692-40994930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               57, 163
               

               Conread position:
               4-128
               

               Cow position:
               chr29:16164248-16164372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-141
               

               Cow position:
               chr29:18577628-18577497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               4-157
               

               Cow position:
               chr29:6517414-6517264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               4-166
               

               Cow position:
               chr29:3826152-3825998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               4-167
               

               Cow position:
               chr29:22652505-22652348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               4-178
               

               Cow position:
               chr29:39639026-39638856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               166, 73
               

               Conread position:
               4-188
               

               Cow position:
               chr29:24319776-24319964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               4-188
               

               Cow position:
               chr29:26211239-26211056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               4-189
               

               Cow position:
               chr29:25793327-25793149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               4-191
               

               Cow position:
               chr29:21666272-21666088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               72, 56
               

               Conread position:
               4-193
               

               Cow position:
               chr29:31211796-31211618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               4-203
               

               Cow position:
               chr29:14552886-14552687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-207
               

               Cow position:
               chr29:16200290-16200493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-207
               

               Cow position:
               chr29:39038083-39038285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               201, 76
               

               Conread position:
               4-214
               

               Cow position:
               chr29:32894443-32894241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               4-215
               

               Cow position:
               chr29:7290955-7290753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               4-217
               

               Cow position:
               chr29:4460312-4460099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               199, 179
               

               Conread position:
               4-217
               

               Cow position:
               chr29:29769168-29769376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               138, 77
               

               Conread position:
               4-218
               

               Cow position:
               chr29:11647300-11647069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 212
               

               Conread position:
               4-218
               

               Cow position:
               chr29:23114814-23115027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               4-218
               

               Cow position:
               chr29:36586755-36586541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               201, 209
               

               Conread position:
               4-219
               

               Cow position:
               chr29:34359640-34359848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 62
               

               Conread position:
               4-220
               

               Cow position:
               chr29:7125007-7124784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               4-221
               

               Cow position:
               chr29:22028775-22028983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               186, 65
               

               Conread position:
               4-222
               

               Cow position:
               chr29:34297385-34297599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 72
               

               Conread position:
               4-224
               

               Cow position:
               chr29:24293056-24292835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               72, 38
               

               Conread position:
               4-224
               

               Cow position:
               chr29:29183909-29183685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               167, 121
               

               Conread position:
               4-225
               

               Cow position:
               chr29:2744083-2744300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               4-225
               

               Cow position:
               chr29:4085482-4085280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               178
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               4-225
               

               Cow position:
               chr29:5302040-5302261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               87, 144
               

               Conread position:
               4-225
               

               Cow position:
               chr29:29324234-29324455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               51, 125
               

               Conread position:
               4-225
               

               Cow position:
               chr29:35677355-35677577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 68
               

               Conread position:
               4-226
               

               Cow position:
               chr29:23711718-23711946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               174, 0
               

               Conread position:
               4-226
               

               Cow position:
               chr29:29188911-29189129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               4-227
               

               Cow position:
               chr29:32197880-32197663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               4-229
               

               Cow position:
               chr29:16196041-16195805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               71, 180
               

               Conread position:
               4-231
               

               Cow position:
               chr29:12025293-12025509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               216, 18
               

               Conread position:
               4-231
               

               Cow position:
               chr29:22166901-22167117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               4-231
               

               Cow position:
               chr29:26017314-26017544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               4-231
               

               Cow position:
               chr29:28994042-28993819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               134, 53
               

               Conread position:
               5-122
               

               Cow position:
               chr29:6515618-6515502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               5-127
               

               Cow position:
               chr29:774175-774053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-147
               

               Cow position:
               chr29:23734901-23735043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-148
               

               Cow position:
               chr29:29296573-29296438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               5-164
               

               Cow position:
               chr29:6756169-6756016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               5-164
               

               Cow position:
               chr29:22019002-22019159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               5-176
               

               Cow position:
               chr29:3538500-3538660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               5-180
               

               Cow position:
               chr29:4484282-4484112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               5-183
               

               Cow position:
               chr29:25288734-25288914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               55, 132
               

               Conread position:
               5-203
               

               Cow position:
               chr29:19363893-19363700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               5-205
               

               Cow position:
               chr29:22734921-22735118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               71, 12
               

               Conread position:
               5-216
               

               Cow position:
               chr29:4520517-4520316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               5-216
               

               Cow position:
               chr29:40097166-40096942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               44, 165
               

               Conread position:
               5-217
               

               Cow position:
               chr29:36531051-36530842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               5-222
               

               Cow position:
               chr29:4070805-4070598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               5-222
               

               Cow position:
               chr29:5568677-5568460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-222
               

               Cow position:
               chr29:38858027-38858243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               64, 38
               

               Conread position:
               5-224
               

               Cow position:
               chr29:22613606-22613398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               5-225
               

               Cow position:
               chr29:5520299-5520518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               5-225
               

               Cow position:
               chr29:20526977-20527198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               215, 142
               

               Conread position:
               5-225
               

               Cow position:
               chr29:21706212-21706429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 101
               

               Conread position:
               5-226
               

               Cow position:
               chr29:44139060-44139279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               105, 74
               

               Conread position:
               5-228
               

               Cow position:
               chr29:11397728-11397961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               62, 96
               

               Conread position:
               5-230
               

               Cow position:
               chr29:22068556-22068778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               5-231
               

               Cow position:
               chr29:40891522-40891735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               5-231
               

               Cow position:
               chr29:42630302-42630082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               6-143
               

               Cow position:
               chr29:24119314-24119451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-158
               

               Cow position:
               chr29:2414567-2414718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               6-186
               

               Cow position:
               chr29:14375695-14375875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-190
               

               Cow position:
               chr29:41422725-41422907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               173, 154
               

               Conread position:
               6-193
               

               Cow position:
               chr29:8634836-8634653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               6-221
               

               Cow position:
               chr29:12783771-12783989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               51, 123
               

               Conread position:
               6-222
               

               Cow position:
               chr29:29552031-29551823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               6-222
               

               Cow position:
               chr29:36632676-36632891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               183, 66
               

               Conread position:
               6-222
               

               Cow position:
               chr29:43544421-43544632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               6-229
               

               Cow position:
               chr29:25475117-25474882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               6-231
               

               Cow position:
               chr29:39131277-39131498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               7-180
               

               Cow position:
               chr29:33393871-33393690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               7-224
               

               Cow position:
               chr29:17110136-17109927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               213, 14
               

               Conread position:
               8-149
               

               Cow position:
               chr29:36546600-36546739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               8-202
               

               Cow position:
               chr29:28478510-28478317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               8-217
               

               Cow position:
               chr29:44684279-44684078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               8-218
               

               Cow position:
               chr29:5109001-5109210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 14
               

               Conread position:
               8-225
               

               Cow position:
               chr29:7109520-7109303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-228
               

               Cow position:
               chr29:5769973-5769758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               95, 50
               

               Conread position:
               8-231
               

               Cow position:
               chr29:29057357-29057140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               9-181
               

               Cow position:
               chr29:8798828-8799004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               9-218
               

               Cow position:
               chr29:8176838-8176629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-222
               

               Cow position:
               chr29:5994907-5995124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               10-158
               

               Cow position:
               chr29:14828047-14828194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               10-207
               

               Cow position:
               chr29:23876652-23876849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-164
               

               Cow position:
               chr29:41223343-41223194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               11-180
               

               Cow position:
               chr29:29312364-29312535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               11-184
               

               Cow position:
               chr29:30742768-30742595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-198
               

               Cow position:
               chr29:32713343-32713155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               11-207
               

               Cow position:
               chr29:23825033-23825226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               194, 64
               

               Conread position:
               11-222
               

               Cow position:
               chr29:8815960-8816172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               194, 154
               

               Conread position:
               11-222
               

               Cow position:
               chr29:19253650-19253860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               197, 34
               

               Conread position:
               11-225
               

               Cow position:
               chr29:19389659-19389445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-225
               

               Cow position:
               chr29:23845019-23844805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               197, 202
               

               Conread position:
               11-225
               

               Cow position:
               chr29:28396876-28396657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               11-225
               

               Cow position:
               chr29:38582149-38581938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               207, 160
               

               Conread position:
               11-229
               

               Cow position:
               chr29:22936465-22936236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               63, 32
               

               Conread position:
               11-231
               

               Cow position:
               chr29:23825841-23825629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               131, 48
               

               Conread position:
               11-231
               

               Cow position:
               chr29:27524654-27524877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               197, 202
               

               Conread position:
               12-165
               

               Cow position:
               chr29:28257320-28257168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               12-222
               

               Cow position:
               chr29:25949975-25950189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               12-230
               

               Cow position:
               chr29:17168583-17168371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               193, 101
               

               Conread position:
               12-231
               

               Cow position:
               chr29:28739805-28739586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 92
               

               Conread position:
               13-187
               

               Cow position:
               chr29:11116486-11116656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               13-207
               

               Cow position:
               chr29:5830839-5831035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               14-227
               

               Cow position:
               chr29:7621382-7621601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               34, 126
               

               Conread position:
               14-231
               

               Cow position:
               chr29:8669531-8669326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 67
               

               Conread position:
               14-231
               

               Cow position:
               chr29:32733472-32733259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               17-163
               

               Cow position:
               chr29:29264906-29265053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               17-179
               

               Cow position:
               chr29:3661958-3662120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-203
               

               Cow position:
               chr29:21932948-21933132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               17-218
               

               Cow position:
               chr29:363424-363223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-218
               

               Cow position:
               chr29:3237178-3237379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-225
               

               Cow position:
               chr29:2188182-2188389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               18-213
               

               Cow position:
               chr29:20781192-20780991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               19-211
               

               Cow position:
               chr29:29973842-29974034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               157
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               21-218
               

               Cow position:
               chr29:30548945-30548750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               22-147
               

               Cow position:
               chr29:41094287-41094162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               22-184
               

               Cow position:
               chr29:42865728-42865567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               22-193
               

               Cow position:
               chr29:22579640-22579470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               22-209
               

               Cow position:
               chr29:24051210-24051398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               155
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 116
               

               Conread position:
               22-213
               

               Cow position:
               chr29:40633821-40633622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               22-217
               

               Cow position:
               chr29:86836-87036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               159
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               49, 78
               

               Conread position:
               22-217
               

               Cow position:
               chr29:22723767-22723576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               22-222
               

               Cow position:
               chr29:27619049-27618851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               183, 119
               

               Conread position:
               22-222
               

               Cow position:
               chr29:29795212-29795412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               186, 191
               

               Conread position:
               22-225
               

               Cow position:
               chr29:5893017-5892812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               22-231
               

               Cow position:
               chr29:22778010-22778217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               98, 38
               

               Conread position:
               22-231
               

               Cow position:
               chr29:38347859-38348071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               129, 90
               

               Conread position:
               22-231
               

               Cow position:
               chr29:40583956-40583754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               54, 26
               

               Conread position:
               23-159
               

               Cow position:
               chr29:29447551-29447414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               118, 57
               

               Conread position:
               23-231
               

               Cow position:
               chr29:13639197-13639405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               166
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               53, 6
               

               Conread position:
               23-231
               

               Cow position:
               chr29:19428823-19428619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               112, 50
               

               Conread position:
               23-231
               

               Cow position:
               chr29:45005458-45005666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               24-172
               

               Cow position:
               chr29:27042442-27042292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               24-193
               

               Cow position:
               chr29:29546185-29546018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               145, 54
               

               Conread position:
               24-225
               

               Cow position:
               chr29:21443170-21443371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-225
               

               Cow position:
               chr29:45589434-45589622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               166, 36
               

               Conread position:
               24-230
               

               Cow position:
               chr29:30713551-30713749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               196, 78
               

               Conread position:
               25-166
               

               Cow position:
               chr29:28279120-28279261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-189
               

               Cow position:
               chr29:5043547-5043383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-164
               

               Cow position:
               chr29:13091307-13091439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 33
               

               Conread position:
               29-218
               

               Cow position:
               chr29:14112546-14112353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               142, 76
               

               Conread position:
               29-225
               

               Cow position:
               chr29:41082186-41082382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-230
               

               Cow position:
               chr29:109841-109656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               191, 33
               

               Conread position:
               29-231
               

               Cow position:
               chr29:27858958-27858753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 138
               

               Conread position:
               30-222
               

               Cow position:
               chr29:35259145-35258955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               151
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               31-143
               

               Cow position:
               chr29:18211628-18211740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               31-185
               

               Cow position:
               chr29:40916966-40916815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               28, 114
               

               Conread position:
               31-197
               

               Cow position:
               chr29:18579681-18579839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               32-231
               

               Cow position:
               chr29:28775305-28775500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               184, 54
               

               Conread position:
               34-218
               

               Cow position:
               chr29:749748-749931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               38-223
               

               Cow position:
               chr29:18203229-18203416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               40-212
               

               Cow position:
               chr29:7966395-7966225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               144
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               167, 36
               

               Conread position:
               42-225
               

               Cow position:
               chr29:32926255-32926068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               46-225
               

               Cow position:
               chr29:20689586-20689763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               47-192
               

               Cow position:
               chr29:42406838-42406693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               50-188
               

               Cow position:
               chr29:44309667-44309800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               51-231
               

               Cow position:
               chr29:13867070-13867251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               151
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               169, 25
               

               Conread position:
               53-216
               

               Cow position:
               chr29:29512002-29512164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               57-225
               

               Cow position:
               chr29:7103693-7103525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               59-219
               

               Cow position:
               chr29:33548089-33548251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               10, 146
               

               Conread position:
               61-180
               

               Cow position:
               chr29:20604504-20604623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               62-172
               

               Cow position:
               chr29:28242213-28242321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               62-188
               

               Cow position:
               chr29:22818904-22818778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               62-205
               

               Cow position:
               chr29:22175812-22175668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               62-213
               

               Cow position:
               chr29:1220001-1220152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               62-218
               

               Cow position:
               chr29:21941731-21941575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               62-224
               

               Cow position:
               chr29:6844502-6844664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               102, 129
               

               Conread position:
               62-225
               

               Cow position:
               chr29:34687963-34687803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               62-226
               

               Cow position:
               chr29:25333331-25333492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               137
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               62-227
               

               Cow position:
               chr29:27664658-27664821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               52, 88
               

               Conread position:
               63-176
               

               Cow position:
               chr29:17022279-17022166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               63-176
               

               Cow position:
               chr29:26943038-26942926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               63-180
               

               Cow position:
               chr29:32301880-32301763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               63-218
               

               Cow position:
               chr29:16365756-16365914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               107, 156
               

               Conread position:
               63-218
               

               Cow position:
               chr29:23243749-23243903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               63-219
               

               Cow position:
               chr29:25088871-25088719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               63-221
               

               Cow position:
               chr29:40298893-40299049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               134
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               63-225
               

               Cow position:
               chr29:18403988-18404149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               63-225
               

               Cow position:
               chr29:42883828-42883991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               100, 60
               

               Conread position:
               63-231
               

               Cow position:
               chr29:24252358-24252199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               156, 14
               

               Conread position:
               64-217
               

               Cow position:
               chr29:28166094-28166245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               141, 97
               

               Conread position:
               64-219
               

               Cow position:
               chr29:12310136-12309981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-231
               

               Cow position:
               chr29:40853056-40852889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               64-231
               

               Cow position:
               chr29:42886670-42886504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               65-176
               

               Cow position:
               chr29:29940769-29940656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               65-201
               

               Cow position:
               chr29:16672616-16672482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               65-217
               

               Cow position:
               chr29:43251040-43251192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               67-222
               

               Cow position:
               chr29:5210618-5210462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 87
               

               Conread position:
               67-222
               

               Cow position:
               chr29:11042553-11042402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               67-224
               

               Cow position:
               chr29:36217235-36217081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               153, 8
               

               Conread position:
               69-207
               

               Cow position:
               chr29:4874757-4874898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               101, 54
               

               Conread position:
               69-211
               

               Cow position:
               chr29:34517368-34517502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               69-222
               

               Cow position:
               chr29:22519004-22519157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               57, 47
               

               Conread position:
               69-231
               

               Cow position:
               chr29:847519-847683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               75, 106
               

               Conread position:
               70-220
               

               Cow position:
               chr29:6293359-6293507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               146, 7
               

               Conread position:
               71-231
               

               Cow position:
               chr29:31491354-31491185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               77-231
               

               Cow position:
               chr29:11053744-11053898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               11, 88
               

               Conread position:
               78-180
               

               Cow position:
               chr29:26208089-26207987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               78-192
               

               Cow position:
               chr29:19059969-19060082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               78-225
               

               Cow position:
               chr29:21509965-21509819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               126, 93
               

               Conread position:
               78-231
               

               Cow position:
               chr29:27562879-27563032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               142, 116
               

               Conread position:
               78-231
               

               Cow position:
               chr29:37599106-37599250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               142, 33
               

               Conread position:
               79-222
               

               Cow position:
               chr29:20903177-20903315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               79-229
               

               Cow position:
               chr29:17409448-17409297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               80-231
               

               Cow position:
               chr29:8004815-8004962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               149, 77
               

               Conread position:
               81-198
               

               Cow position:
               chr29:19244348-19244465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               81-220
               

               Cow position:
               chr29:8862370-8862507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               81-221
               

               Cow position:
               chr29:6015237-6015095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               102, 87
               

               Conread position:
               81-222
               

               Cow position:
               chr29:9912286-9912146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               81-225
               

               Cow position:
               chr29:5947695-5947837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               81-231
               

               Cow position:
               chr29:10235027-10235172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               138, 8
               

               Conread position:
               84-231
               

               Cow position:
               chr29:27873709-27873562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               134, 118
               

               Conread position:
               89-218
               

               Cow position:
               chr29:17154881-17154753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               89-221
               

               Cow position:
               chr29:30918652-30918520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               89-225
               

               Cow position:
               chr29:12625873-12626009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-222
               

               Cow position:
               chr29:8686432-8686300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-222
               

               Cow position:
               chr29:18012660-18012528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-231
               

               Cow position:
               chr29:19821385-19821247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               91-189
               

               Cow position:
               chr29:39285596-39285498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               91-218
               

               Cow position:
               chr29:28868744-28868613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               93-221
               

               Cow position:
               chr29:9638221-9638349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-231
               

               Cow position:
               chr29:19558923-19559060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               102-231
               

               Cow position:
               chr29:41365199-41365072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               128-222
               

               Cow position:
               chr29:2071507-2071602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-116
Cow position:	chr29:35663727-35663843 (view UCSC Genome Browser custom track)
Alignm length:	117
Alignm identity:	94
Alignm E-value:	4e-24
Alignm gaps (pig, cow):	75, 0
Conread position:	1-145
Cow position:	chr29:7143488-7143342 (view UCSC Genome Browser custom track)
Alignm length:	147
Alignm identity:	113
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	75, 0
Conread position:	1-169
Cow position:	chr29:16735415-16735247 (view UCSC Genome Browser custom track)
Alignm length:	169
Alignm identity:	134
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	0, 0
Conread position:	1-175
Cow position:	chr29:20177501-20177687 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	139
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	75, 0
Conread position:	1-178
Cow position:	chr29:22128053-22127884 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	133
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	52, 0
Conread position:	1-182
Cow position:	chr29:25432643-25432464 (view UCSC Genome Browser custom track)
Alignm length:	183
Alignm identity:	133
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	48, 34
Conread position:	1-185
Cow position:	chr29:23142143-23142327 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	148
Alignm E-value:	8.00001e-42
Alignm gaps (pig, cow):	168, 178
Conread position:	1-189
Cow position:	chr29:24365708-24365893 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	149
Alignm E-value:	2e-40
Alignm gaps (pig, cow):	128, 0
Conread position:	1-201
Cow position:	chr29:1615116-1614921 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	136
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	80, 0
Conread position:	1-203
Cow position:	chr29:6819806-6819603 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	142
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	90, 0
Conread position:	1-225
Cow position:	chr29:15944750-15944527 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	151
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	156, 0
Conread position:	1-227
Cow position:	chr29:29923387-29923606 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	152
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	55, 0
Conread position:	1-231
Cow position:	chr29:9709882-9709656 (view UCSC Genome Browser custom track)
Alignm length:	232
Alignm identity:	171
Alignm E-value:	6e-39
Alignm gaps (pig, cow):	189, 59
Conread position:	2-133
Cow position:	chr29:4741201-4741332 (view UCSC Genome Browser custom track)
Alignm length:	132
Alignm identity:	108
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	0, 0
Conread position:	2-155
Cow position:	chr29:16438584-16438742 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	126
Alignm E-value:	7e-30
Alignm gaps (pig, cow):	74, 91
Conread position:	2-164
Cow position:	chr29:18748199-18748362 (view UCSC Genome Browser custom track)
Alignm length:	166
Alignm identity:	127
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	62, 45
Conread position:	2-166
Cow position:	chr29:10191857-10192013 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	129
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	142, 53
Conread position:	2-169
Cow position:	chr29:30088867-30089032 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	117
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	136, 0
Conread position:	2-176
Cow position:	chr29:22576990-22577163 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	143
Alignm E-value:	2.99878e-43
Alignm gaps (pig, cow):	84, 0
Conread position:	2-187
Cow position:	chr29:8628909-8629094 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	130
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	0, 0