Cow genome map

Conread name: raor017_a12.y1

Conread position: 13-266
Cow position: chr21:17982935-17983181 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 223, 38

Conread position: 20-243
Cow position: chr21:10001041-10001256 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 217, 40

Conread position: 20-254
Cow position: chr21:4399769-4399997 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 216, 34

Conread position: 20-256
Cow position: chr21:6997906-6998140 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 34

Conread position: 20-259
Cow position: chr21:7581940-7581708 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 40, 67

Conread position: 20-259
Cow position: chr21:23322110-23321885 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 20-261
Cow position: chr21:13365304-13365539 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 20-262
Cow position: chr21:33687-33919 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 217, 40

Conread position: 20-262
Cow position: chr21:29484945-29485178 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 217, 34

Conread position: 20-263
Cow position: chr21:25628944-25628710 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 225, 31

Conread position: 20-264
Cow position: chr21:30607123-30606897 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 162, 34

Conread position: 20-265
Cow position: chr21:32339771-32339537 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 217, 34

Conread position: 20-265
Cow position: chr21:47363772-47363530 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 130, 34

Conread position: 20-281
Cow position: chr21:23568187-23568441 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 92, 34

Conread position: 20-281
Cow position: chr21:45329980-45329738 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 35

Conread position: 20-283
Cow position: chr21:4281905-4281665 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 20-283
Cow position: chr21:16152402-16152658 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 40

Conread position: 20-283
Cow position: chr21:17183889-17184136 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 217, 34

Conread position: 20-283
Cow position: chr21:20152920-20153175 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 215, 34

Conread position: 20-283
Cow position: chr21:28919558-28919313 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 20-283
Cow position: chr21:29014947-29014699 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 20-284
Cow position: chr21:8549646-8549902 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 31

Conread position: 20-287
Cow position: chr21:39403570-39403306 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 31

Conread position: 20-288
Cow position: chr21:41140751-41140492 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 209, 31

Conread position: 20-289
Cow position: chr21:641552-641808 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 34, 0

Conread position: 20-289
Cow position: chr21:868959-868695 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 225, 42

Conread position: 20-289
Cow position: chr21:3361047-3360792 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 156, 33

Conread position: 20-289
Cow position: chr21:4905000-4904740 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 216, 34

Conread position: 20-289
Cow position: chr21:9311011-9311279 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 115, 34

Conread position: 20-289
Cow position: chr21:10004921-10004659 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 34

Conread position: 20-289
Cow position: chr21:10114367-10114109 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 19, 24

Conread position: 20-289
Cow position: chr21:10263999-10264259 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 217, 21

Conread position: 20-289
Cow position: chr21:10410186-10410447 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 217, 34

Conread position: 20-289
Cow position: chr21:10816989-10817258 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 177
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 73, 34

Conread position: 20-289
Cow position: chr21:11740155-11739895 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 217, 34

Conread position: 20-289
Cow position: chr21:12462004-12461746 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 177, 34

Conread position: 20-289
Cow position: chr21:17193787-17193524 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 163, 40

Conread position: 20-289
Cow position: chr21:17875225-17874966 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 221, 31

Conread position: 20-289
Cow position: chr21:18155601-18155340 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 216, 34

Conread position: 20-289
Cow position: chr21:19060121-19059867 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 20-289
Cow position: chr21:20160644-20160903 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 221, 34

Conread position: 20-289
Cow position: chr21:21907463-21907218 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 20-289
Cow position: chr21:23980214-23979955 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 220, 31

Conread position: 20-289
Cow position: chr21:28244435-28244691 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 20-289
Cow position: chr21:30231725-30231472 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 221, 31

Conread position: 20-289
Cow position: chr21:30835329-30835590 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 216, 34

Conread position: 20-289
Cow position: chr21:34654042-34654294 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 20-289
Cow position: chr21:38449481-38449228 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 20-289
Cow position: chr21:45971205-45970955 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 23-289
Cow position: chr21:10072115-10072390 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 16

Conread position: 23-289
Cow position: chr21:19196193-19195937 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 218, 28

Conread position: 23-289
Cow position: chr21:33982837-33982590 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 23-289
Cow position: chr21:36696121-36695863 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 217, 28

Conread position: 23-289
Cow position: chr21:36909904-36910155 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 256, 31

Conread position: 24-212
Cow position: chr21:34391005-34390826 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 24-289
Cow position: chr21:29978790-29978540 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 24-289
Cow position: chr21:41198434-41198172 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 212, 30

Conread position: 27-235
Cow position: chr21:44214097-44214298 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 98, 26

Conread position: 27-263
Cow position: chr21:395843-396069 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 210, 24

Conread position: 27-289
Cow position: chr21:11644997-11644742 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 87, 27

Conread position: 27-289
Cow position: chr21:24858288-24858540 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 210, 21

Conread position: 27-289
Cow position: chr21:28030261-28030507 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 27-289
Cow position: chr21:29014587-29014334 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 252, 21

Conread position: 27-289
Cow position: chr21:29069356-29069099 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 77, 26

Conread position: 27-289
Cow position: chr21:31691455-31691697 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 149, 27

Conread position: 28-242
Cow position: chr21:45262837-45262631 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 28-287
Cow position: chr21:30222318-30222564 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 28-289
Cow position: chr21:47465147-47464895 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 39, 0

Conread position: 29-225
Cow position: chr21:46141019-46141210 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 25

Conread position: 29-252
Cow position: chr21:15976608-15976822 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 207, 25

Conread position: 29-259
Cow position: chr21:5392565-5392340 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 126, 64

Conread position: 29-262
Cow position: chr21:10538275-10538055 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 207, 19

Conread position: 29-262
Cow position: chr21:36795575-36795803 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 128, 25

Conread position: 29-281
Cow position: chr21:7377952-7377707 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 212, 22

Conread position: 29-281
Cow position: chr21:42007488-42007243 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 25

Conread position: 29-283
Cow position: chr21:21169517-21169275 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 208, 25

Conread position: 29-283
Cow position: chr21:40589510-40589262 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 121, 25

Conread position: 29-288
Cow position: chr21:22856195-22856444 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 207, 31

Conread position: 29-289
Cow position: chr21:47012-47271 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 210, 32

Conread position: 29-289
Cow position: chr21:957647-957893 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 189, 25

Conread position: 29-289
Cow position: chr21:6051482-6051728 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 29-289
Cow position: chr21:6624135-6624383 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 29-289
Cow position: chr21:6713551-6713300 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 119, 22

Conread position: 29-289
Cow position: chr21:6834025-6834274 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 29-289
Cow position: chr21:8349303-8349549 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 29-289
Cow position: chr21:8546045-8545796 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 10

Conread position: 29-289
Cow position: chr21:9416223-9416474 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 142, 25

Conread position: 29-289
Cow position: chr21:9698108-9697854 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 207, 35

Conread position: 29-289
Cow position: chr21:13048220-13047966 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 203, 25

Conread position: 29-289
Cow position: chr21:14452211-14452461 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 210, 22

Conread position: 29-289
Cow position: chr21:17890278-17890527 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 29-289
Cow position: chr21:20165616-20165864 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 29-289
Cow position: chr21:22014162-22014415 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 214, 25

Conread position: 29-289
Cow position: chr21:27863540-27863295 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 25, 0

Conread position: 29-289
Cow position: chr21:28237737-28237475 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 208, 33

Conread position: 29-289
Cow position: chr21:34151559-34151804 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 29-289
Cow position: chr21:37790025-37789778 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 29-289
Cow position: chr21:41522432-41522184 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 210, 26

Conread position: 29-289
Cow position: chr21:42135645-42135395 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 29-289
Cow position: chr21:42501014-42501276 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 114, 22

Conread position: 30-229
Cow position: chr21:36789767-36789962 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 179, 24

Conread position: 30-263
Cow position: chr21:15584444-15584218 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 205, 30

Conread position: 30-280
Cow position: chr21:712903-713161 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 18

Conread position: 30-285
Cow position: chr21:41621100-41621348 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 210, 24

Conread position: 30-289
Cow position: chr21:23535689-23535936 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 213, 23

Conread position: 30-289
Cow position: chr21:25127578-25127831 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 206, 24

Conread position: 30-289
Cow position: chr21:37706443-37706188 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 84, 24

Conread position: 30-289
Cow position: chr21:41155839-41156095 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 135, 21

Conread position: 31-281
Cow position: chr21:49700057-49699821 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 205, 23

Conread position: 31-289
Cow position: chr21:71559-71810 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 24, 50

Conread position: 32-289
Cow position: chr21:33580399-33580635 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 33-289
Cow position: chr21:18318692-18318937 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 203, 18

Conread position: 34-281
Cow position: chr21:9990490-9990727 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 203, 19

Conread position: 34-289
Cow position: chr21:29214181-29213931 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 200, 38

Conread position: 34-289
Cow position: chr21:41590586-41590342 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 34-289
Cow position: chr21:47719325-47719080 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 18

Conread position: 35-274
Cow position: chr21:33350721-33350957 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 202, 19

Conread position: 35-289
Cow position: chr21:742266-742498 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 35-289
Cow position: chr21:8426427-8426666 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 35-289
Cow position: chr21:13089489-13089241 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 201, 27

Conread position: 35-289
Cow position: chr21:19258805-19259040 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 35-289
Cow position: chr21:44251860-44251616 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 202, 13

Conread position: 49-283
Cow position: chr21:16604325-16604096 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 183, 29

Conread position: 53-289
Cow position: chr21:8431105-8430873 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 184, 26

Conread position: 54-277
Cow position: chr21:37299456-37299677 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 180, 43

Conread position: 54-281
Cow position: chr21:3585369-3585148 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 194, 14

Conread position: 54-282
Cow position: chr21:41918248-41918021 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 35

Conread position: 54-289
Cow position: chr21:643322-643547 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 54-289
Cow position: chr21:7768432-7768659 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 54-289
Cow position: chr21:10147989-10148223 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 25

Conread position: 54-289
Cow position: chr21:13588760-13588986 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 181, 38

Conread position: 54-289
Cow position: chr21:38918201-38918426 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 64, 25

Conread position: 56-283
Cow position: chr21:18568640-18568419 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 57-257
Cow position: chr21:28924111-28924305 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 28

Conread position: 57-272
Cow position: chr21:31159404-31159605 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 57-283
Cow position: chr21:12739080-12739306 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 179, 20

Conread position: 57-289
Cow position: chr21:22718783-22718559 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 178, 25

Conread position: 57-289
Cow position: chr21:36508242-36508457 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 57-289
Cow position: chr21:36763050-36763286 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 189

Conread position: 57-289
Cow position: chr21:41040931-41041172 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 9

Conread position: 57-289
Cow position: chr21:44724364-44724152 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 59-287
Cow position: chr21:21615777-21616001 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 183

Conread position: 59-288
Cow position: chr21:10292495-10292717 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 152
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 59-289
Cow position: chr21:21686420-21686642 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 188, 26

Conread position: 61-289
Cow position: chr21:829207-828986 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 94, 31

Conread position: 63-259
Cow position: chr21:2657815-2658006 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 177, 22

Conread position: 64-289
Cow position: chr21:39319406-39319183 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 173, 15

Conread position: 69-262
Cow position: chr21:36682334-36682525 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 167, 16

Conread position: 77-289
Cow position: chr21:17403836-17403623 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 23

Conread position: 80-283
Cow position: chr21:11174256-11174462 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 23

Conread position: 85-289
Cow position: chr21:24296746-24296541 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 115, 133

Conread position: 85-289
Cow position: chr21:25344883-25345088 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 152, 0

Conread position: 86-263
Cow position: chr21:11057854-11057680 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 151, 16

Conread position: 86-289
Cow position: chr21:8713937-8713733 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 36

Conread position: 88-289
Cow position: chr21:12310503-12310697 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 15

Conread position: 91-289
Cow position: chr21:40475528-40475725 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 146, 16

Conread position: 92-283
Cow position: chr21:20318540-20318737 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 62

Conread position: 92-284
Cow position: chr21:17252949-17252758 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 92-289
Cow position: chr21:20163737-20163931 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 5, 11

Conread position: 93-289
Cow position: chr21:48637727-48637531 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 43

Conread position: 94-272
Cow position: chr21:38121132-38121311 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 142, 166

Conread position: 94-289
Cow position: chr21:10009793-10009590 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 29

Conread position: 94-289
Cow position: chr21:10978917-10978722 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 147, 72

Conread position: 94-289
Cow position: chr21:17842965-17842771 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 144, 24

Conread position: 96-262
Cow position: chr21:13163892-13164059 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 145, 0

Conread position: 96-262
Cow position: chr21:27569136-27568972 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 141, 65

Conread position: 96-287
Cow position: chr21:9477197-9477386 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 62

Conread position: 96-287
Cow position: chr21:32297486-32297286 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 140, 0

Conread position: 96-289
Cow position: chr21:802284-802100 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 145, 0

Conread position: 96-289
Cow position: chr21:16914805-16915005 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 97-289
Cow position: chr21:13580446-13580639 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 66

Conread position: 97-289
Cow position: chr21:19561534-19561340 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 97-289
Cow position: chr21:26018413-26018605 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 137, 98

Conread position: 97-289
Cow position: chr21:31652422-31652611 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 150, 49

Conread position: 97-289
Cow position: chr21:42328631-42328437 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 152, 0

Conread position: 98-283
Cow position: chr21:39393783-39393966 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 115, 144

Conread position: 98-289
Cow position: chr21:24875386-24875576 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 8, 145

Conread position: 99-289
Cow position: chr21:14464616-14464810 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 81

Conread position: 100-289
Cow position: chr21:19868917-19868738 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 101-289
Cow position: chr21:16498557-16498739 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 101-289
Cow position: chr21:24266527-24266337 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 143, 11

Conread position: 101-289
Cow position: chr21:27677520-27677707 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 135, 54

Conread position: 103-289
Cow position: chr21:11625783-11625970 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 37

Conread position: 103-289
Cow position: chr21:22005869-22005676 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 103-289
Cow position: chr21:44829720-44829532 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 103-289
Cow position: chr21:46809731-46809540 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 177

Conread position: 105-289
Cow position: chr21:13674610-13674425 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 62

Conread position: 106-272
Cow position: chr21:13225758-13225925 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 131, 0

Conread position: 107-289
Cow position: chr21:38482425-38482606 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 152, 49

Conread position: 109-288
Cow position: chr21:18341264-18341445 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 112-289
Cow position: chr21:30938623-30938442 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 154

Conread position: 115-289
Cow position: chr21:15012491-15012658 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 116-283
Cow position: chr21:6153854-6154021 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 45, 17

Conread position: 117-283
Cow position: chr21:37928703-37928870 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 117-289
Cow position: chr21:2537085-2536912 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 39, 45

Conread position: 117-289
Cow position: chr21:3415708-3415880 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 117-289
Cow position: chr21:14360419-14360592 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 117-289
Cow position: chr21:25012136-25012302 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 117-289
Cow position: chr21:27712189-27712010 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 117-289
Cow position: chr21:40820799-40820627 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 108

Conread position: 119-289
Cow position: chr21:6736133-6735969 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 128, 0

Conread position: 119-289
Cow position: chr21:19161768-19161939 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 119-289
Cow position: chr21:31659091-31658930 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 121-288
Cow position: chr21:8506487-8506324 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 121-288
Cow position: chr21:8509375-8509212 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 123-289
Cow position: chr21:6584078-6583916 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 132-289
Cow position: chr21:48482461-48482306 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 109, 0

Conread position: 133-276
Cow position: chr21:14745839-14745983 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 142-283
Cow position: chr21:16796930-16797073 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 145-253
Cow position: chr21:28617870-28617979 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 145-281
Cow position: chr21:30970017-30970152 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 145-289
Cow position: chr21:12348847-12348992 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 146-281
Cow position: chr21:745258-745386 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 152-289
Cow position: chr21:15271348-15271213 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 158-289
Cow position: chr21:11099876-11099744 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 160-289
Cow position: chr21:4108872-4109001 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 79, 109

Conread position: 161-262
Cow position: chr21:19665804-19665702 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 87
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 161-281
Cow position: chr21:3177945-3178065 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 161-281
Cow position: chr21:27567992-27568111 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 62

Conread position: 161-283
Cow position: chr21:6291844-6291967 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 161-289
Cow position: chr21:5214446-5214576 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 161-289
Cow position: chr21:27409634-27409511 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 161-289
Cow position: chr21:27744123-27744253 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 161-289
Cow position: chr21:28882280-28882407 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 161-289
Cow position: chr21:34738676-34738799 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 161-289
Cow position: chr21:41738006-41738132 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 162-254
Cow position: chr21:32536495-32536588 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 81
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 162-282
Cow position: chr21:42017504-42017382 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 162-287
Cow position: chr21:8351194-8351072 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 85

Conread position: 162-288
Cow position: chr21:18056030-18055906 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 64

Conread position: 162-289
Cow position: chr21:7460706-7460829 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 162-289
Cow position: chr21:11353159-11353287 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 162-289
Cow position: chr21:27521240-27521117 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 108
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 162-289
Cow position: chr21:29418667-29418795 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 162-289
Cow position: chr21:42905299-42905171 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 163-283
Cow position: chr21:3135769-3135648 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 163-283
Cow position: chr21:42189656-42189542 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 163-283
Cow position: chr21:45537284-45537406 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 163-289
Cow position: chr21:1464443-1464570 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 163-289
Cow position: chr21:12640570-12640697 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 163-289
Cow position: chr21:27810487-27810616 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 165-283
Cow position: chr21:43655804-43655920 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 166-289
Cow position: chr21:5344981-5345105 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 168-283
Cow position: chr21:15305194-15305077 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 96

Conread position: 168-284
Cow position: chr21:13134705-13134822 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 168-289
Cow position: chr21:11006666-11006544 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 58

Conread position: 168-289
Cow position: chr21:48205116-48204994 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 169-289
Cow position: chr21:7424908-7424789 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 77

Conread position: 171-289
Cow position: chr21:31258574-31258693 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 175-289
Cow position: chr21:15444973-15444858 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 99
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 175-289
Cow position: chr21:16120049-16119936 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 178-289
Cow position: chr21:19340117-19340006 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 184-289
Cow position: chr21:16099444-16099336 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 184-289
Cow position: chr21:28191467-28191573 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 189-283
Cow position: chr21:26828848-26828753 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 190-289
Cow position: chr21:34209889-34209789 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 195-289
Cow position: chr21:40821763-40821668 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.