Cow genome map

Conread name: raor017_a12.y1

Conread position: 1-262
Cow position: chr3:22716445-22716184 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 15

Conread position: 1-289
Cow position: chr3:19711476-19711200 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 51

Conread position: 5-289
Cow position: chr3:59604709-59604978 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 28

Conread position: 5-289
Cow position: chr3:60264852-60264585 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 11-289
Cow position: chr3:29891542-29891270 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 226, 43

Conread position: 12-288
Cow position: chr3:49678999-49679269 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 8

Conread position: 12-289
Cow position: chr3:48459463-48459193 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 181
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 144, 11

Conread position: 18-289
Cow position: chr3:15951035-15950782 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 19-283
Cow position: chr3:11254281-11254035 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 218, 35

Conread position: 19-289
Cow position: chr3:66900858-66900590 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 218, 31

Conread position: 20-200
Cow position: chr3:71161674-71161848 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 20-232
Cow position: chr3:5097085-5097288 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 20-232
Cow position: chr3:55109738-55109532 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 20-244
Cow position: chr3:55085298-55085077 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 67

Conread position: 20-249
Cow position: chr3:72504021-72503797 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 5, 41

Conread position: 20-254
Cow position: chr3:63269101-63269323 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 20-254
Cow position: chr3:80053660-80053440 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 20-261
Cow position: chr3:55712310-55712551 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 40

Conread position: 20-261
Cow position: chr3:66884061-66883834 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 20-262
Cow position: chr3:12712039-12711805 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 217, 34

Conread position: 20-262
Cow position: chr3:52863305-52863071 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 203, 34

Conread position: 20-262
Cow position: chr3:55970385-55970618 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 94, 28

Conread position: 20-262
Cow position: chr3:84175947-84175712 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 20-265
Cow position: chr3:14465832-14465592 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 20-265
Cow position: chr3:53739307-53739074 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 20-266
Cow position: chr3:48252763-48253000 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 20-272
Cow position: chr3:52017647-52017894 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 137, 34

Conread position: 20-273
Cow position: chr3:18067014-18067255 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 94, 34

Conread position: 20-274
Cow position: chr3:2025065-2025324 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 77, 31

Conread position: 20-275
Cow position: chr3:82461057-82461298 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 20-281
Cow position: chr3:57577578-57577825 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 20-281
Cow position: chr3:70334816-70334564 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 220, 31

Conread position: 20-281
Cow position: chr3:73708927-73709175 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 217, 18

Conread position: 20-281
Cow position: chr3:74878710-74878462 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 259, 33

Conread position: 20-283
Cow position: chr3:6689880-6690133 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 31

Conread position: 20-283
Cow position: chr3:21015082-21014823 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 160, 34

Conread position: 20-283
Cow position: chr3:45183957-45183691 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 28

Conread position: 20-283
Cow position: chr3:51578442-51578194 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 34

Conread position: 20-287
Cow position: chr3:15052073-15051818 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 168, 40

Conread position: 20-287
Cow position: chr3:36375662-36375404 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 83, 22

Conread position: 20-287
Cow position: chr3:55177872-55177617 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 34

Conread position: 20-287
Cow position: chr3:68616446-68616201 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 20-287
Cow position: chr3:81039866-81039612 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 227, 31

Conread position: 20-288
Cow position: chr3:19198860-19199123 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 33

Conread position: 20-288
Cow position: chr3:43233387-43233638 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 31

Conread position: 20-288
Cow position: chr3:53318283-53318545 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 132, 31

Conread position: 20-289
Cow position: chr3:2393084-2392833 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 171, 34

Conread position: 20-289
Cow position: chr3:2506597-2506340 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 136, 34

Conread position: 20-289
Cow position: chr3:3032284-3032545 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 209, 34

Conread position: 20-289
Cow position: chr3:3985206-3985452 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 20-289
Cow position: chr3:8061006-8061260 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 20-289
Cow position: chr3:9663292-9663033 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 216, 21

Conread position: 20-289
Cow position: chr3:10958364-10958105 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 131, 31

Conread position: 20-289
Cow position: chr3:11987207-11987464 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 20-289
Cow position: chr3:13380408-13380142 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 74, 28

Conread position: 20-289
Cow position: chr3:19793712-19793454 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 20-289
Cow position: chr3:31309475-31309215 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 216, 31

Conread position: 20-289
Cow position: chr3:39969989-39969727 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 153, 60

Conread position: 20-289
Cow position: chr3:46006147-46005879 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 82, 34

Conread position: 20-289
Cow position: chr3:53270708-53270969 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 94, 31

Conread position: 20-289
Cow position: chr3:54373980-54373721 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 227, 31

Conread position: 20-289
Cow position: chr3:55819629-55819885 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 85, 34

Conread position: 20-289
Cow position: chr3:59040446-59040706 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 31

Conread position: 20-289
Cow position: chr3:62046541-62046807 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 117, 31

Conread position: 20-289
Cow position: chr3:65413401-65413138 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 211, 34

Conread position: 20-289
Cow position: chr3:65969040-65969310 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 92, 31

Conread position: 20-289
Cow position: chr3:67520293-67520040 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 123, 40

Conread position: 20-289
Cow position: chr3:68145963-68145715 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 20-289
Cow position: chr3:68586899-68587154 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 42

Conread position: 20-289
Cow position: chr3:70334085-70333833 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 221, 31

Conread position: 20-289
Cow position: chr3:70762244-70761987 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 79, 44

Conread position: 20-289
Cow position: chr3:71478471-71478730 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 111, 31

Conread position: 20-289
Cow position: chr3:72390964-72391224 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 220, 31

Conread position: 20-289
Cow position: chr3:75158238-75158494 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 222, 34

Conread position: 20-289
Cow position: chr3:76268100-76267838 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 217, 34

Conread position: 20-289
Cow position: chr3:77188317-77188576 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 123, 28

Conread position: 20-289
Cow position: chr3:77365419-77365151 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 33

Conread position: 21-289
Cow position: chr3:12978736-12978479 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 173, 26

Conread position: 23-243
Cow position: chr3:4050076-4050286 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 213, 31

Conread position: 23-289
Cow position: chr3:174829-175080 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 89, 28

Conread position: 23-289
Cow position: chr3:7661734-7661993 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 47, 30

Conread position: 23-289
Cow position: chr3:72473794-72474058 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 205, 31

Conread position: 23-289
Cow position: chr3:74119558-74119292 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 23

Conread position: 24-274
Cow position: chr3:73395004-73395238 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 24-276
Cow position: chr3:25690675-25690923 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 212, 30

Conread position: 24-276
Cow position: chr3:49461047-49460800 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 212, 36

Conread position: 24-289
Cow position: chr3:15954204-15953946 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 212, 36

Conread position: 24-289
Cow position: chr3:48241499-48241746 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 0

Conread position: 24-289
Cow position: chr3:59649138-59649394 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 132, 30

Conread position: 24-289
Cow position: chr3:69416900-69416642 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 175
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 152, 30

Conread position: 25-283
Cow position: chr3:60597425-60597667 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 197, 29

Conread position: 27-232
Cow position: chr3:79094162-79093962 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 33

Conread position: 27-262
Cow position: chr3:62789294-62789063 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 157
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 129, 27

Conread position: 27-262
Cow position: chr3:80072012-80072239 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 27-281
Cow position: chr3:71497258-71497001 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 27

Conread position: 27-288
Cow position: chr3:23169180-23168930 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 0

Conread position: 27-289
Cow position: chr3:27274415-27274663 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 27-289
Cow position: chr3:53221900-53222148 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 123, 27

Conread position: 27-289
Cow position: chr3:55189871-55189614 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 149, 27

Conread position: 27-289
Cow position: chr3:76155873-76156122 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 27-289
Cow position: chr3:79196645-79196899 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 71, 26

Conread position: 29-239
Cow position: chr3:76922775-76922575 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 29-240
Cow position: chr3:5365565-5365766 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 29-240
Cow position: chr3:49650274-49650477 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 29-244
Cow position: chr3:55272159-55271951 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 207, 25

Conread position: 29-246
Cow position: chr3:42423445-42423232 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 72, 26

Conread position: 29-256
Cow position: chr3:57624352-57624566 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 29-257
Cow position: chr3:49790922-49790707 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 29-257
Cow position: chr3:56059695-56059918 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 211, 22

Conread position: 29-259
Cow position: chr3:57760387-57760607 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 208, 31

Conread position: 29-261
Cow position: chr3:26874480-26874700 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 29-261
Cow position: chr3:55835937-55835709 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 24

Conread position: 29-261
Cow position: chr3:81471207-81470987 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 22

Conread position: 29-263
Cow position: chr3:53113061-53113288 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 210, 25

Conread position: 29-266
Cow position: chr3:5366658-5366884 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 207, 22

Conread position: 29-271
Cow position: chr3:30222075-30222314 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 125, 25

Conread position: 29-272
Cow position: chr3:49327829-49328062 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 29-281
Cow position: chr3:22221207-22221454 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 68, 25

Conread position: 29-281
Cow position: chr3:28898334-28898091 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 210, 22

Conread position: 29-281
Cow position: chr3:55094347-55094100 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 26, 0

Conread position: 29-283
Cow position: chr3:13301960-13301719 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 209, 25

Conread position: 29-283
Cow position: chr3:15443842-15443596 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 208, 25

Conread position: 29-283
Cow position: chr3:58318066-58317813 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 25

Conread position: 29-288
Cow position: chr3:12705658-12705412 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 29-288
Cow position: chr3:19585749-19585999 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 29-288
Cow position: chr3:70565850-70565599 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 207, 25

Conread position: 29-288
Cow position: chr3:70609514-70609760 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 29-288
Cow position: chr3:75479890-75480133 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 29-289
Cow position: chr3:210205-210458 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 211, 12

Conread position: 29-289
Cow position: chr3:1517625-1517376 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 256, 33

Conread position: 29-289
Cow position: chr3:3883931-3883684 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 25

Conread position: 29-289
Cow position: chr3:13890363-13890616 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 213, 33

Conread position: 29-289
Cow position: chr3:14552766-14553008 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 29-289
Cow position: chr3:18686795-18687037 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 29-289
Cow position: chr3:19792781-19793036 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 25

Conread position: 29-289
Cow position: chr3:23408464-23408227 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 29-289
Cow position: chr3:23920541-23920290 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 211, 25

Conread position: 29-289
Cow position: chr3:24468491-24468246 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 207, 22

Conread position: 29-289
Cow position: chr3:30179969-30180219 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 85, 31

Conread position: 29-289
Cow position: chr3:31225326-31225562 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 29-289
Cow position: chr3:32787347-32787598 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 207, 33

Conread position: 29-289
Cow position: chr3:35056091-35055840 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 116, 19

Conread position: 29-289
Cow position: chr3:37041302-37041557 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 29-289
Cow position: chr3:44101859-44102103 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 134, 22

Conread position: 29-289
Cow position: chr3:44932400-44932648 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 205, 25

Conread position: 29-289
Cow position: chr3:45667457-45667207 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 149, 22

Conread position: 29-289
Cow position: chr3:47417678-47417435 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 29-289
Cow position: chr3:50768570-50768815 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 29-289
Cow position: chr3:53150216-53150469 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 125, 24

Conread position: 29-289
Cow position: chr3:53592806-53592550 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 207, 33

Conread position: 29-289
Cow position: chr3:54946016-54946260 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 29-289
Cow position: chr3:58134800-58134548 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 29-289
Cow position: chr3:59474008-59474256 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 29-289
Cow position: chr3:64010935-64010674 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 25

Conread position: 29-289
Cow position: chr3:64281044-64280802 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 119, 33

Conread position: 29-289
Cow position: chr3:64526735-64526985 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 211, 25

Conread position: 29-289
Cow position: chr3:71231286-71231534 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 219, 25

Conread position: 29-289
Cow position: chr3:71238044-71238286 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 29-289
Cow position: chr3:73820482-73820226 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 85, 25

Conread position: 29-289
Cow position: chr3:74079751-74079502 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 29-289
Cow position: chr3:77271386-77271142 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 29-289
Cow position: chr3:80564851-80565100 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 30-256
Cow position: chr3:59884183-59883964 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 30-262
Cow position: chr3:13507353-13507580 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 184, 23

Conread position: 30-262
Cow position: chr3:59621758-59621536 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 207, 21

Conread position: 30-262
Cow position: chr3:70899783-70900002 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 207, 24

Conread position: 30-277
Cow position: chr3:25944973-25945220 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 49, 24

Conread position: 30-283
Cow position: chr3:4319600-4319847 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 209, 24

Conread position: 30-283
Cow position: chr3:59000863-59000633 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 30

Conread position: 30-285
Cow position: chr3:53910001-53910241 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 156, 21

Conread position: 30-289
Cow position: chr3:2674917-2675168 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 207, 24

Conread position: 30-289
Cow position: chr3:3913556-3913301 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 24

Conread position: 30-289
Cow position: chr3:18059590-18059840 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 129, 21

Conread position: 30-289
Cow position: chr3:51234207-51233968 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 30-289
Cow position: chr3:57273954-57274195 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 153, 30

Conread position: 30-289
Cow position: chr3:65058590-65058834 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 111, 24

Conread position: 31-263
Cow position: chr3:22509916-22510136 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 31-289
Cow position: chr3:55124395-55124145 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 8, 24

Conread position: 32-289
Cow position: chr3:188754-189011 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 167
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 51, 22

Conread position: 32-289
Cow position: chr3:4268692-4268438 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 114, 21

Conread position: 32-289
Cow position: chr3:55319012-55318762 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 114, 19

Conread position: 32-289
Cow position: chr3:73837826-73837582 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 33-253
Cow position: chr3:33693709-33693922 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 21

Conread position: 33-262
Cow position: chr3:55983986-55984210 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 204, 21

Conread position: 33-283
Cow position: chr3:83215151-83215399 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 206, 21

Conread position: 33-289
Cow position: chr3:57704214-57704468 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 103, 18

Conread position: 33-289
Cow position: chr3:75050728-75050485 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 79, 18

Conread position: 34-257
Cow position: chr3:54290623-54290407 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 149
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 34-281
Cow position: chr3:9116920-9117157 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 199, 26

Conread position: 34-289
Cow position: chr3:45881796-45882035 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 203, 20

Conread position: 34-289
Cow position: chr3:54506596-54506842 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 34-289
Cow position: chr3:61224856-61224613 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 34-289
Cow position: chr3:74234083-74234321 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 203, 17

Conread position: 35-262
Cow position: chr3:49382840-49383060 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 7, 17

Conread position: 35-266
Cow position: chr3:23471575-23471342 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 58, 67

Conread position: 35-275
Cow position: chr3:45211188-45211426 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 60, 19

Conread position: 35-281
Cow position: chr3:1830681-1830445 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 206, 16

Conread position: 35-281
Cow position: chr3:14801635-14801875 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 111, 14

Conread position: 35-283
Cow position: chr3:48900449-48900200 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 65, 54

Conread position: 35-288
Cow position: chr3:68627793-68627552 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 35-289
Cow position: chr3:3656407-3656654 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 77, 19

Conread position: 35-289
Cow position: chr3:7566531-7566285 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 35-289
Cow position: chr3:30009020-30008770 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 18

Conread position: 35-289
Cow position: chr3:39661562-39661318 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 201, 13

Conread position: 35-289
Cow position: chr3:53046769-53046522 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 202, 13

Conread position: 35-289
Cow position: chr3:74134593-74134843 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 202, 19

Conread position: 35-289
Cow position: chr3:83988425-83988673 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 121, 11

Conread position: 36-283
Cow position: chr3:52652187-52651950 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 138, 15

Conread position: 36-289
Cow position: chr3:3316918-3316672 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 207, 15

Conread position: 36-289
Cow position: chr3:22165523-22165279 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 201, 18

Conread position: 36-289
Cow position: chr3:59945020-59945263 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 202, 18

Conread position: 39-286
Cow position: chr3:19626612-19626374 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 182, 15

Conread position: 39-289
Cow position: chr3:15153586-15153824 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 45-289
Cow position: chr3:17222244-17221997 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 153, 37

Conread position: 49-259
Cow position: chr3:15506351-15506558 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 188, 31

Conread position: 49-262
Cow position: chr3:17935035-17934827 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 34

Conread position: 50-265
Cow position: chr3:82629216-82629430 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 33, 43

Conread position: 50-289
Cow position: chr3:51609280-51609048 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 36

Conread position: 51-289
Cow position: chr3:27976619-27976386 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 190, 41

Conread position: 53-289
Cow position: chr3:49996817-49996581 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 9

Conread position: 54-239
Cow position: chr3:15228910-15228735 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 60, 28

Conread position: 54-269
Cow position: chr3:15172988-15173202 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 182, 26

Conread position: 54-284
Cow position: chr3:30463259-30463044 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 186, 23

Conread position: 54-289
Cow position: chr3:17456357-17456131 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 200, 26

Conread position: 54-289
Cow position: chr3:31350195-31349972 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 54-289
Cow position: chr3:52608090-52608317 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 54-289
Cow position: chr3:73961789-73961558 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 182, 31

Conread position: 55-283
Cow position: chr3:11640639-11640866 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 182, 37

Conread position: 56-289
Cow position: chr3:23203323-23203093 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 44

Conread position: 57-283
Cow position: chr3:81087719-81087506 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 153, 25

Conread position: 57-289
Cow position: chr3:2648598-2648372 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 57-289
Cow position: chr3:72342158-72342384 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 179, 28

Conread position: 57-289
Cow position: chr3:75238371-75238596 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 95, 28

Conread position: 57-289
Cow position: chr3:84250631-84250413 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 29

Conread position: 58-239
Cow position: chr3:83928162-83928334 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 58-274
Cow position: chr3:54481889-54481676 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 180, 32

Conread position: 58-288
Cow position: chr3:64196738-64196960 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 58-289
Cow position: chr3:34871479-34871704 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 180, 33

Conread position: 59-289
Cow position: chr3:4548930-4549159 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 186

Conread position: 59-289
Cow position: chr3:7763572-7763794 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 178, 23

Conread position: 61-277
Cow position: chr3:73460881-73461090 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 211, 31

Conread position: 61-289
Cow position: chr3:71474491-71474271 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 62-265
Cow position: chr3:84157533-84157330 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 34

Conread position: 62-288
Cow position: chr3:1890194-1889971 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 30

Conread position: 62-289
Cow position: chr3:40145385-40145603 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 177, 29

Conread position: 63-279
Cow position: chr3:36160276-36160066 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 174, 16

Conread position: 63-280
Cow position: chr3:47316461-47316251 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 46

Conread position: 63-283
Cow position: chr3:5707295-5707080 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 19

Conread position: 64-261
Cow position: chr3:4480860-4481053 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 169, 18

Conread position: 64-289
Cow position: chr3:31361338-31361559 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 15

Conread position: 75-283
Cow position: chr3:84174225-84174434 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 162, 0

Conread position: 75-289
Cow position: chr3:9026157-9025947 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 155, 17

Conread position: 76-289
Cow position: chr3:79272650-79272440 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 88

Conread position: 85-279
Cow position: chr3:33252953-33252766 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 85-288
Cow position: chr3:53428981-53428783 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 86-289
Cow position: chr3:38035654-38035452 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 142, 11

Conread position: 88-289
Cow position: chr3:42796576-42796382 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 91-289
Cow position: chr3:33048455-33048256 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 92-272
Cow position: chr3:7581775-7581595 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 144, 7

Conread position: 92-289
Cow position: chr3:12090615-12090813 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 152, 11

Conread position: 92-289
Cow position: chr3:23105422-23105229 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 6, 154

Conread position: 93-276
Cow position: chr3:13241132-13240950 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 5

Conread position: 93-287
Cow position: chr3:16752316-16752120 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 144, 78

Conread position: 93-289
Cow position: chr3:26982001-26982194 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 93-289
Cow position: chr3:31077786-31077588 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 8

Conread position: 93-289
Cow position: chr3:49482773-49482576 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 144, 9

Conread position: 93-289
Cow position: chr3:54100785-54100577 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 94-239
Cow position: chr3:18459583-18459440 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 94-262
Cow position: chr3:10103984-10104152 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 153, 76

Conread position: 94-287
Cow position: chr3:79271768-79271575 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 7

Conread position: 94-289
Cow position: chr3:48072939-48072747 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 142, 153

Conread position: 94-289
Cow position: chr3:52845503-52845691 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 94-289
Cow position: chr3:76269835-76270024 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 95-271
Cow position: chr3:66631408-66631230 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 95-283
Cow position: chr3:2483948-2484131 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 145, 0

Conread position: 95-283
Cow position: chr3:48468117-48468306 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 17

Conread position: 95-288
Cow position: chr3:16505530-16505349 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 95-289
Cow position: chr3:17134278-17134467 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 141, 0

Conread position: 95-289
Cow position: chr3:51033310-51033509 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 141, 0

Conread position: 96-263
Cow position: chr3:53508556-53508724 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 140, 0

Conread position: 96-289
Cow position: chr3:8349620-8349432 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 30

Conread position: 96-289
Cow position: chr3:52487559-52487765 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 8, 54

Conread position: 96-289
Cow position: chr3:54067741-54067933 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 50

Conread position: 96-289
Cow position: chr3:68303262-68303454 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 6

Conread position: 96-289
Cow position: chr3:69650944-69650753 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 18, 26

Conread position: 97-289
Cow position: chr3:39996945-39996755 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 142

Conread position: 97-289
Cow position: chr3:78092565-78092375 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 144, 112

Conread position: 98-289
Cow position: chr3:68156669-68156864 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 99-257
Cow position: chr3:20841925-20841768 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 152, 0

Conread position: 99-289
Cow position: chr3:9120793-9120981 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 142, 52

Conread position: 99-289
Cow position: chr3:11281714-11281905 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 139, 0

Conread position: 99-289
Cow position: chr3:49363057-49363243 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 147, 0

Conread position: 100-288
Cow position: chr3:53084039-53083848 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 100-289
Cow position: chr3:27083100-27082905 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 100-289
Cow position: chr3:32409161-32409356 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 0

Conread position: 101-239
Cow position: chr3:51349773-51349911 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 101-289
Cow position: chr3:5305748-5305944 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 136, 0

Conread position: 101-289
Cow position: chr3:6182271-6182096 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 101-289
Cow position: chr3:10668929-10668743 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 116, 65

Conread position: 101-289
Cow position: chr3:16107407-16107236 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 101-289
Cow position: chr3:21867088-21866902 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 58, 51

Conread position: 101-289
Cow position: chr3:23132219-23132032 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 0

Conread position: 101-289
Cow position: chr3:40213083-40212899 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 101-289
Cow position: chr3:56949138-56948957 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 101-289
Cow position: chr3:73335234-73335418 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 102-281
Cow position: chr3:46792336-46792511 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 102-283
Cow position: chr3:38783557-38783738 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 135, 155

Conread position: 102-289
Cow position: chr3:1011437-1011628 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 126

Conread position: 102-289
Cow position: chr3:3556496-3556684 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 135, 0

Conread position: 103-284
Cow position: chr3:2518587-2518411 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 138, 0

Conread position: 103-284
Cow position: chr3:26338075-26337886 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 103-288
Cow position: chr3:75107726-75107907 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 133, 0

Conread position: 103-289
Cow position: chr3:1028694-1028511 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 103-289
Cow position: chr3:29946339-29946525 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 103-289
Cow position: chr3:83889199-83889385 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 127, 55

Conread position: 104-289
Cow position: chr3:15158984-15159170 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 130, 0

Conread position: 104-289
Cow position: chr3:26603602-26603411 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 105-289
Cow position: chr3:10841766-10841952 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 111-289
Cow position: chr3:44959901-44960081 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 112-274
Cow position: chr3:6728369-6728206 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 112-289
Cow position: chr3:15973527-15973706 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 124, 0

Conread position: 113-283
Cow position: chr3:82123585-82123420 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 50, 42

Conread position: 116-289
Cow position: chr3:70756676-70756503 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 120, 17

Conread position: 117-283
Cow position: chr3:72255453-72255288 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 121, 88

Conread position: 117-289
Cow position: chr3:35624579-35624407 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 124, 103

Conread position: 117-289
Cow position: chr3:83770697-83770870 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 119-289
Cow position: chr3:5703146-5703312 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 122, 77

Conread position: 119-289
Cow position: chr3:8814145-8813965 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 119-289
Cow position: chr3:28902791-28902626 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 43

Conread position: 119-289
Cow position: chr3:48483146-48483317 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 120-288
Cow position: chr3:35238982-35239146 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 120-289
Cow position: chr3:11229396-11229232 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 120-289
Cow position: chr3:20021238-20021404 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 124-289
Cow position: chr3:32376785-32376948 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 123

Conread position: 125-289
Cow position: chr3:45314318-45314488 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 126-289
Cow position: chr3:81666774-81666935 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 38

Conread position: 128-289
Cow position: chr3:19788853-19788695 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 91

Conread position: 129-289
Cow position: chr3:47199149-47198989 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 108, 149

Conread position: 130-284
Cow position: chr3:59947644-59947799 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 130-287
Cow position: chr3:77171294-77171452 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 37

Conread position: 130-289
Cow position: chr3:18700132-18699972 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 130-289
Cow position: chr3:43389149-43388989 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 111, 0

Conread position: 130-289
Cow position: chr3:83199491-83199649 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 131-289
Cow position: chr3:45743885-45744046 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 12, 63

Conread position: 132-289
Cow position: chr3:7381850-7381696 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 105, 23

Conread position: 132-289
Cow position: chr3:27286499-27286651 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 142-289
Cow position: chr3:55730478-55730330 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 144-289
Cow position: chr3:25735913-25735767 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 145-283
Cow position: chr3:79398136-79398275 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 145-289
Cow position: chr3:36412094-36411947 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 151-288
Cow position: chr3:17531738-17531601 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 160-288
Cow position: chr3:62789946-62789815 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 160-289
Cow position: chr3:51150137-51150268 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 161-283
Cow position: chr3:37851506-37851629 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 16, 109

Conread position: 161-289
Cow position: chr3:17039622-17039753 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 161-289
Cow position: chr3:25702332-25702195 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 161-289
Cow position: chr3:28884151-28884026 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 95, 45

Conread position: 161-289
Cow position: chr3:35079498-35079369 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 161-289
Cow position: chr3:59271841-59271967 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 161-289
Cow position: chr3:62186161-62186294 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 161-289
Cow position: chr3:67942526-67942397 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 161-289
Cow position: chr3:70402654-70402774 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 161-289
Cow position: chr3:70431440-70431570 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 80, 32

Conread position: 162-283
Cow position: chr3:24596412-24596294 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 162-283
Cow position: chr3:25037981-25037864 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 162-283
Cow position: chr3:25060338-25060459 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 105

Conread position: 162-286
Cow position: chr3:41366699-41366574 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 162-289
Cow position: chr3:49733042-49732914 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 80, 52

Conread position: 162-289
Cow position: chr3:59317713-59317836 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 162-289
Cow position: chr3:63069355-63069225 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 162-289
Cow position: chr3:68624228-68624355 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 75, 96

Conread position: 162-289
Cow position: chr3:84137804-84137678 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 91

Conread position: 163-271
Cow position: chr3:28415774-28415882 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 163-274
Cow position: chr3:21694236-21694349 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 163-283
Cow position: chr3:80958499-80958379 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 15

Conread position: 163-289
Cow position: chr3:3453591-3453718 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 163-289
Cow position: chr3:4071759-4071633 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 78, 39

Conread position: 163-289
Cow position: chr3:9718240-9718113 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 163-289
Cow position: chr3:10115310-10115431 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 163-289
Cow position: chr3:23804517-23804641 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 163-289
Cow position: chr3:42589110-42589238 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 163-289
Cow position: chr3:53875753-53875626 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 163-289
Cow position: chr3:58614468-58614600 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 163-289
Cow position: chr3:61024011-61023884 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 109
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 163-289
Cow position: chr3:62312808-62312934 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 15

Conread position: 163-289
Cow position: chr3:62370067-62370193 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 15

Conread position: 163-289
Cow position: chr3:75966772-75966646 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 54, 81

Conread position: 163-289
Cow position: chr3:76168620-76168493 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 163-289
Cow position: chr3:76300783-76300910 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 163-289
Cow position: chr3:79893486-79893360 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 163-289
Cow position: chr3:80910607-80910733 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 164-289
Cow position: chr3:986027-986151 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 73, 52

Conread position: 164-289
Cow position: chr3:63860598-63860474 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 72, 93

Conread position: 165-289
Cow position: chr3:18479284-18479160 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 37

Conread position: 165-289
Cow position: chr3:42483940-42484067 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 165-289
Cow position: chr3:60370996-60371121 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 165-289
Cow position: chr3:83934739-83934860 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 166-289
Cow position: chr3:8523139-8523018 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 45

Conread position: 166-289
Cow position: chr3:80023296-80023173 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 71, 109

Conread position: 168-289
Cow position: chr3:2016452-2016568 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 168-289
Cow position: chr3:29234664-29234541 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 168-289
Cow position: chr3:35802924-35802800 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 168-289
Cow position: chr3:55106132-55106010 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 168-289
Cow position: chr3:76056268-76056152 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 104
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 169-289
Cow position: chr3:49787576-49787692 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 169-289
Cow position: chr3:58929517-58929396 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 169-289
Cow position: chr3:84807310-84807189 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 170-281
Cow position: chr3:28897003-28896893 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 170-288
Cow position: chr3:20911391-20911272 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 170-289
Cow position: chr3:621453-621577 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 170-289
Cow position: chr3:37641345-37641462 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 170-289
Cow position: chr3:70319786-70319665 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 172-283
Cow position: chr3:22078096-22078208 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 175-282
Cow position: chr3:20066126-20066018 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 175-282
Cow position: chr3:44218789-44218897 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 94
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 178-289
Cow position: chr3:58010804-58010692 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 178-289
Cow position: chr3:61171342-61171228 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 181-289
Cow position: chr3:78115563-78115454 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 199-289
Cow position: chr3:42933528-42933619 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Show alignments to all cow chromosomes.