Cow genome map

Conread name: raor017_a12.y1

Conread position: 4-259
Cow position: chrX:9416780-9416524 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 56

Conread position: 7-289
Cow position: chrX:20151768-20152037 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 13

Conread position: 10-254
Cow position: chrX:22915118-22914891 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 45

Conread position: 11-280
Cow position: chrX:19965482-19965215 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 178
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 85, 51

Conread position: 12-287
Cow position: chrX:24331702-24331964 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 224, 8

Conread position: 17-255
Cow position: chrX:27511353-27511582 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 220, 64

Conread position: 19-289
Cow position: chrX:31489448-31489710 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 133, 36

Conread position: 19-289
Cow position: chrX:34554654-34554913 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 63, 32

Conread position: 20-221
Cow position: chrX:11856358-11856551 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 20-254
Cow position: chrX:6265670-6265442 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 199, 34

Conread position: 20-257
Cow position: chrX:29549618-29549394 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 20-259
Cow position: chrX:5872250-5872477 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 221, 34

Conread position: 20-260
Cow position: chrX:6278571-6278337 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 217, 40

Conread position: 20-261
Cow position: chrX:46433420-46433652 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 20-262
Cow position: chrX:11717859-11717618 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 217, 34

Conread position: 20-262
Cow position: chrX:23562564-23562796 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 217, 27

Conread position: 20-262
Cow position: chrX:27394091-27393863 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 220, 32

Conread position: 20-262
Cow position: chrX:29680331-29680099 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 20-262
Cow position: chrX:45884046-45883808 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 130, 31

Conread position: 20-271
Cow position: chrX:14599462-14599704 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 216, 31

Conread position: 20-273
Cow position: chrX:28878240-28878001 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 217, 34

Conread position: 20-275
Cow position: chrX:13868632-13868879 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 179
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 204, 40

Conread position: 20-275
Cow position: chrX:34441522-34441278 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 219, 34

Conread position: 20-275
Cow position: chrX:41879003-41878758 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 18

Conread position: 20-276
Cow position: chrX:32330089-32330347 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 21

Conread position: 20-281
Cow position: chrX:27509094-27508843 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 226, 31

Conread position: 20-281
Cow position: chrX:27705516-27705768 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 217, 34

Conread position: 20-281
Cow position: chrX:31729371-31729618 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 20-281
Cow position: chrX:46532572-46532309 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 225, 34

Conread position: 20-283
Cow position: chrX:8731016-8731277 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 217, 34

Conread position: 20-283
Cow position: chrX:20339960-20339710 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 221, 34

Conread position: 20-283
Cow position: chrX:27174925-27175182 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 217, 35

Conread position: 20-283
Cow position: chrX:30962944-30962692 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 203, 42

Conread position: 20-283
Cow position: chrX:31252347-31252591 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 221, 34

Conread position: 20-283
Cow position: chrX:31294634-31294386 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 224, 40

Conread position: 20-283
Cow position: chrX:33466539-33466808 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 60, 31

Conread position: 20-283
Cow position: chrX:41068650-41068903 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 173
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 20-287
Cow position: chrX:21672485-21672749 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 120, 31

Conread position: 20-289
Cow position: chrX:6690326-6690072 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 20-289
Cow position: chrX:9201479-9201731 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 20-289
Cow position: chrX:9635256-9635000 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 238, 31

Conread position: 20-289
Cow position: chrX:10831564-10831292 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 156, 31

Conread position: 20-289
Cow position: chrX:13647856-13647595 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 217, 34

Conread position: 20-289
Cow position: chrX:14955835-14955579 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 219, 33

Conread position: 20-289
Cow position: chrX:20168487-20168747 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 221, 31

Conread position: 20-289
Cow position: chrX:23563861-23563601 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 216, 34

Conread position: 20-289
Cow position: chrX:24365896-24365633 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 220, 31

Conread position: 20-289
Cow position: chrX:25815977-25815710 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 83, 29

Conread position: 20-289
Cow position: chrX:27228057-27228318 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 193, 40

Conread position: 20-289
Cow position: chrX:27261117-27261380 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 12, 16

Conread position: 20-289
Cow position: chrX:27301800-27302066 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 34

Conread position: 20-289
Cow position: chrX:29601901-29601640 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 217, 34

Conread position: 20-289
Cow position: chrX:30133391-30133131 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 20-289
Cow position: chrX:32820959-32821229 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 130, 34

Conread position: 20-289
Cow position: chrX:33000832-33001087 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 204, 34

Conread position: 20-289
Cow position: chrX:34313958-34314210 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 20-289
Cow position: chrX:34411771-34412037 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 217, 34

Conread position: 20-289
Cow position: chrX:34502851-34503117 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 221, 34

Conread position: 20-289
Cow position: chrX:35885798-35885543 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 20-289
Cow position: chrX:36866100-36866362 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 214, 31

Conread position: 20-289
Cow position: chrX:37955762-37956037 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 69, 22

Conread position: 20-289
Cow position: chrX:38549376-38549635 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 34

Conread position: 20-289
Cow position: chrX:39220009-39220275 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 219, 26

Conread position: 20-289
Cow position: chrX:40035514-40035250 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 126, 34

Conread position: 20-289
Cow position: chrX:40283055-40283312 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 211, 31

Conread position: 20-289
Cow position: chrX:44054736-44054992 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 216, 31

Conread position: 20-289
Cow position: chrX:44961678-44961943 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 219, 33

Conread position: 20-289
Cow position: chrX:48010530-48010794 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 175
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 216, 28

Conread position: 22-242
Cow position: chrX:11073261-11073049 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 31

Conread position: 22-289
Cow position: chrX:16762700-16762957 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 177, 40

Conread position: 23-254
Cow position: chrX:19097290-19097065 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 117, 31

Conread position: 23-262
Cow position: chrX:619072-618847 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 23-262
Cow position: chrX:43730286-43730061 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 212, 29

Conread position: 23-276
Cow position: chrX:23113210-23113459 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 73, 18

Conread position: 23-289
Cow position: chrX:21642546-21642292 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 215, 31

Conread position: 23-289
Cow position: chrX:22283764-22284028 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 31

Conread position: 23-289
Cow position: chrX:38094589-38094335 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 24-283
Cow position: chrX:40680544-40680798 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 213, 27

Conread position: 24-289
Cow position: chrX:1055461-1055192 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 63, 27

Conread position: 24-289
Cow position: chrX:36975885-36976141 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 213, 24

Conread position: 24-289
Cow position: chrX:47344227-47344488 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 212, 30

Conread position: 25-287
Cow position: chrX:1466095-1466347 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 0

Conread position: 27-228
Cow position: chrX:35224232-35224424 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 27-237
Cow position: chrX:20584260-20584465 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 27-256
Cow position: chrX:40557745-40557523 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 27

Conread position: 27-259
Cow position: chrX:33493713-33493933 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 27-259
Cow position: chrX:41884478-41884252 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 215, 33

Conread position: 27-261
Cow position: chrX:17725910-17726138 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 204, 24

Conread position: 27-283
Cow position: chrX:21986356-21986118 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 27-286
Cow position: chrX:9651089-9650841 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 27-287
Cow position: chrX:27431978-27431734 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 27-288
Cow position: chrX:29050183-29050431 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 194, 27

Conread position: 27-288
Cow position: chrX:40685395-40685141 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 214, 24

Conread position: 27-289
Cow position: chrX:9252226-9251974 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 27-289
Cow position: chrX:22115380-22115126 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 230, 24

Conread position: 27-289
Cow position: chrX:34532457-34532707 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 216, 25

Conread position: 27-289
Cow position: chrX:34792372-34792131 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 183
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 26

Conread position: 27-289
Cow position: chrX:35542831-35543073 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 28-262
Cow position: chrX:616325-616097 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 69, 26

Conread position: 29-239
Cow position: chrX:46072882-46072678 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 29-252
Cow position: chrX:31311967-31312182 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 210, 19

Conread position: 29-257
Cow position: chrX:38964043-38964266 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 42, 25

Conread position: 29-259
Cow position: chrX:25036925-25037147 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 210, 25

Conread position: 29-261
Cow position: chrX:36067951-36068177 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 205, 25

Conread position: 29-262
Cow position: chrX:9365737-9365513 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 127, 25

Conread position: 29-280
Cow position: chrX:35590819-35590578 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 207, 25

Conread position: 29-281
Cow position: chrX:38218648-38218894 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 23

Conread position: 29-281
Cow position: chrX:42855393-42855644 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 208, 23

Conread position: 29-281
Cow position: chrX:44657023-44656781 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 25

Conread position: 29-283
Cow position: chrX:12309447-12309202 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 207, 22

Conread position: 29-283
Cow position: chrX:41790507-41790244 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 62, 22

Conread position: 29-286
Cow position: chrX:37781173-37780925 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 185, 35

Conread position: 29-287
Cow position: chrX:5118564-5118311 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 114, 33

Conread position: 29-287
Cow position: chrX:33855295-33855036 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 25

Conread position: 29-288
Cow position: chrX:6413986-6414226 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 29-289
Cow position: chrX:161351-161592 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 204, 24

Conread position: 29-289
Cow position: chrX:296333-296581 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 22

Conread position: 29-289
Cow position: chrX:1616106-1615869 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 29-289
Cow position: chrX:2675019-2674768 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 114, 33

Conread position: 29-289
Cow position: chrX:3579884-3580134 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 207, 22

Conread position: 29-289
Cow position: chrX:4109128-4109374 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 207, 22

Conread position: 29-289
Cow position: chrX:4515622-4515877 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 119, 31

Conread position: 29-289
Cow position: chrX:7351239-7351493 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 209, 25

Conread position: 29-289
Cow position: chrX:11633618-11633871 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 22

Conread position: 29-289
Cow position: chrX:13121868-13122133 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 22

Conread position: 29-289
Cow position: chrX:26881630-26881373 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 192, 25

Conread position: 29-289
Cow position: chrX:40826813-40826561 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 190, 25

Conread position: 29-289
Cow position: chrX:41027094-41027349 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 208, 25

Conread position: 29-289
Cow position: chrX:42247248-42246992 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 25

Conread position: 29-289
Cow position: chrX:43008535-43008799 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 69, 0

Conread position: 29-289
Cow position: chrX:47484327-47484073 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 235, 25

Conread position: 30-259
Cow position: chrX:33639912-33640135 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 207, 24

Conread position: 30-262
Cow position: chrX:42235589-42235362 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 127, 23

Conread position: 30-281
Cow position: chrX:21327845-21328095 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 105, 30

Conread position: 30-289
Cow position: chrX:12095834-12095582 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 106, 21

Conread position: 30-289
Cow position: chrX:17231672-17231926 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 193, 24

Conread position: 30-289
Cow position: chrX:25035440-25035192 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 205, 21

Conread position: 30-289
Cow position: chrX:31250326-31250578 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 206, 31

Conread position: 30-289
Cow position: chrX:46587759-46588009 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 207, 24

Conread position: 31-239
Cow position: chrX:46429881-46429680 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 6, 18

Conread position: 31-262
Cow position: chrX:40269428-40269653 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 137, 22

Conread position: 31-289
Cow position: chrX:31948998-31948745 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 24

Conread position: 31-289
Cow position: chrX:34222654-34222902 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 31-289
Cow position: chrX:34565221-34565474 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 220, 23

Conread position: 32-286
Cow position: chrX:4279176-4278932 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 33-285
Cow position: chrX:14275804-14275563 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 65, 21

Conread position: 33-289
Cow position: chrX:8869462-8869215 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 189, 21

Conread position: 33-289
Cow position: chrX:13146923-13147169 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 205, 21

Conread position: 34-289
Cow position: chrX:169602-169352 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 207, 17

Conread position: 34-289
Cow position: chrX:22074737-22074985 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 82, 13

Conread position: 34-289
Cow position: chrX:41526584-41526344 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 50

Conread position: 35-261
Cow position: chrX:878439-878222 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 35-279
Cow position: chrX:34238659-34238902 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 177, 25

Conread position: 35-280
Cow position: chrX:44192505-44192263 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 144, 25

Conread position: 35-289
Cow position: chrX:6407488-6407733 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 79, 25

Conread position: 35-289
Cow position: chrX:10516194-10516443 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 202, 19

Conread position: 35-289
Cow position: chrX:12290666-12290907 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 202, 25

Conread position: 35-289
Cow position: chrX:29544931-29544693 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 36-276
Cow position: chrX:6541791-6541549 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 111, 15

Conread position: 36-289
Cow position: chrX:44339379-44339131 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 201, 18

Conread position: 37-289
Cow position: chrX:35985764-35986009 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 200, 23

Conread position: 38-289
Cow position: chrX:20887698-20887456 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 186, 13

Conread position: 39-283
Cow position: chrX:18964876-18964642 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 201, 10

Conread position: 39-289
Cow position: chrX:34505103-34504864 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 142, 15

Conread position: 39-289
Cow position: chrX:43321119-43320863 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 15

Conread position: 48-281
Cow position: chrX:34315471-34315703 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 41

Conread position: 51-289
Cow position: chrX:4645953-4645725 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 53-248
Cow position: chrX:41192660-41192853 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 184, 24

Conread position: 54-260
Cow position: chrX:37489684-37489877 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 54-265
Cow position: chrX:11326139-11325935 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 54-266
Cow position: chrX:41871026-41871233 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 54-274
Cow position: chrX:6599823-6599609 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 183, 31

Conread position: 54-289
Cow position: chrX:19394513-19394744 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 168, 53

Conread position: 55-262
Cow position: chrX:40532082-40531880 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 182, 25

Conread position: 55-275
Cow position: chrX:35268827-35269031 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 55-284
Cow position: chrX:38642211-38642430 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 55-289
Cow position: chrX:17956657-17956878 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 188, 25

Conread position: 55-289
Cow position: chrX:22393024-22392799 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 57-264
Cow position: chrX:6260184-6259985 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 57-276
Cow position: chrX:38321423-38321207 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 57-289
Cow position: chrX:28866041-28865815 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 29

Conread position: 57-289
Cow position: chrX:42893881-42894111 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 186

Conread position: 58-289
Cow position: chrX:43150385-43150620 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 24

Conread position: 59-279
Cow position: chrX:46793780-46793571 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 59-287
Cow position: chrX:24749053-24749274 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 178, 28

Conread position: 59-288
Cow position: chrX:17794941-17795168 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 50

Conread position: 59-289
Cow position: chrX:12979871-12979646 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 21

Conread position: 59-289
Cow position: chrX:13913033-13913264 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 26

Conread position: 59-289
Cow position: chrX:36367976-36367745 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 21

Conread position: 59-289
Cow position: chrX:44660622-44660399 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 160, 16

Conread position: 59-289
Cow position: chrX:48473873-48474098 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 178, 20

Conread position: 60-262
Cow position: chrX:37129234-37129432 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 26

Conread position: 60-288
Cow position: chrX:22482732-22482501 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 20

Conread position: 60-289
Cow position: chrX:5919457-5919681 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 140, 30

Conread position: 61-289
Cow position: chrX:31442863-31442650 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 61-289
Cow position: chrX:40336866-40337100 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 18, 108

Conread position: 63-283
Cow position: chrX:34543750-34543968 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 176, 19

Conread position: 63-289
Cow position: chrX:1397596-1397814 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 164, 16

Conread position: 66-262
Cow position: chrX:20743575-20743766 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 66-281
Cow position: chrX:32318276-32318482 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 25

Conread position: 83-289
Cow position: chrX:24170746-24170536 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 20

Conread position: 85-262
Cow position: chrX:22822032-22822211 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 150, 13

Conread position: 85-288
Cow position: chrX:25207869-25207673 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 90-256
Cow position: chrX:20697618-20697454 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 90-283
Cow position: chrX:38967878-38968078 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 89

Conread position: 90-289
Cow position: chrX:27668967-27668773 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 91-289
Cow position: chrX:28940233-28940433 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 161

Conread position: 91-289
Cow position: chrX:30672405-30672195 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 91-289
Cow position: chrX:34837072-34836882 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 91-289
Cow position: chrX:44040172-44040366 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 31

Conread position: 92-262
Cow position: chrX:16409594-16409765 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 7

Conread position: 92-283
Cow position: chrX:15147200-15147014 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 92-284
Cow position: chrX:34376936-34377123 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 92-289
Cow position: chrX:4403303-4403507 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 92-289
Cow position: chrX:26979797-26979600 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 141, 94

Conread position: 92-289
Cow position: chrX:42927832-42927641 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 5

Conread position: 93-281
Cow position: chrX:3806676-3806859 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 8

Conread position: 93-283
Cow position: chrX:40108525-40108330 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 8

Conread position: 93-288
Cow position: chrX:47345319-47345518 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 93-289
Cow position: chrX:5063245-5063427 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 93-289
Cow position: chrX:7648417-7648224 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 63, 69

Conread position: 93-289
Cow position: chrX:26843276-26843077 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 145, 0

Conread position: 93-289
Cow position: chrX:29733599-29733393 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 155, 0

Conread position: 94-268
Cow position: chrX:4616017-4615843 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 123

Conread position: 94-270
Cow position: chrX:42492529-42492351 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 28

Conread position: 94-289
Cow position: chrX:26205454-26205265 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 147, 0

Conread position: 94-289
Cow position: chrX:30337958-30337765 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 155, 34

Conread position: 94-289
Cow position: chrX:31436468-31436658 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 142, 0

Conread position: 94-289
Cow position: chrX:32574311-32574505 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 142, 173

Conread position: 95-281
Cow position: chrX:23335977-23335794 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 145, 38

Conread position: 95-288
Cow position: chrX:2935952-2936141 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 151, 0

Conread position: 95-288
Cow position: chrX:10252203-10252014 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 63

Conread position: 95-289
Cow position: chrX:27145599-27145788 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 146, 0

Conread position: 96-281
Cow position: chrX:16575107-16575294 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 96-281
Cow position: chrX:33204973-33204787 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 150, 140

Conread position: 96-287
Cow position: chrX:26493000-26493194 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 96-289
Cow position: chrX:13177483-13177292 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 14, 148

Conread position: 96-289
Cow position: chrX:27075055-27074862 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 96-289
Cow position: chrX:27446682-27446872 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 26

Conread position: 96-289
Cow position: chrX:42381117-42380921 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 97-289
Cow position: chrX:18111376-18111568 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 5

Conread position: 97-289
Cow position: chrX:45448899-45449099 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 98-283
Cow position: chrX:4559737-4559917 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 46

Conread position: 98-283
Cow position: chrX:34420732-34420919 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 98-288
Cow position: chrX:33654846-33654655 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 138, 0

Conread position: 98-289
Cow position: chrX:20677365-20677556 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 136, 5

Conread position: 98-289
Cow position: chrX:39180236-39180044 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 6, 106

Conread position: 99-289
Cow position: chrX:4632859-4632665 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 57, 0

Conread position: 99-289
Cow position: chrX:11656080-11656267 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 142, 0

Conread position: 99-289
Cow position: chrX:17704388-17704577 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 137, 154

Conread position: 100-283
Cow position: chrX:4328183-4328000 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 142, 125

Conread position: 100-287
Cow position: chrX:36283338-36283527 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 118

Conread position: 100-289
Cow position: chrX:29451547-29451356 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 115, 18

Conread position: 101-288
Cow position: chrX:42479834-42480015 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 144, 0

Conread position: 101-289
Cow position: chrX:6559447-6559267 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 88

Conread position: 101-289
Cow position: chrX:11859536-11859347 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 136, 85

Conread position: 101-289
Cow position: chrX:29478725-29478911 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 136, 74

Conread position: 101-289
Cow position: chrX:35275987-35276175 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 30

Conread position: 101-289
Cow position: chrX:38587842-38587653 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 24

Conread position: 101-289
Cow position: chrX:39290360-39290543 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 128, 0

Conread position: 101-289
Cow position: chrX:43115152-43115338 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 135, 57

Conread position: 101-289
Cow position: chrX:46770962-46770773 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 107, 122

Conread position: 102-289
Cow position: chrX:42450012-42449824 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 135, 0

Conread position: 103-274
Cow position: chrX:25049279-25049107 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 133, 0

Conread position: 103-289
Cow position: chrX:17524381-17524194 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 49, 56

Conread position: 103-289
Cow position: chrX:35658803-35658986 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 138, 18

Conread position: 103-289
Cow position: chrX:41941626-41941812 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 134, 170

Conread position: 103-289
Cow position: chrX:42432512-42432325 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 82

Conread position: 105-289
Cow position: chrX:19761759-19761938 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 136, 0

Conread position: 112-265
Cow position: chrX:31829448-31829295 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 125, 6

Conread position: 112-289
Cow position: chrX:32420226-32420400 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 112-289
Cow position: chrX:35392282-35392114 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 113-289
Cow position: chrX:20957252-20957428 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 127, 8

Conread position: 117-271
Cow position: chrX:36313989-36313835 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 145

Conread position: 117-289
Cow position: chrX:1122526-1122357 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 120, 42

Conread position: 117-289
Cow position: chrX:20345470-20345640 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 120, 16

Conread position: 117-289
Cow position: chrX:20583683-20583852 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 119, 0

Conread position: 117-289
Cow position: chrX:31479988-31480155 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 59

Conread position: 118-289
Cow position: chrX:15545900-15546071 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 118-289
Cow position: chrX:42836199-42836370 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 119-289
Cow position: chrX:19018812-19018639 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 119-289
Cow position: chrX:19717540-19717703 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 119-289
Cow position: chrX:32877356-32877187 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 132, 0

Conread position: 120-289
Cow position: chrX:28067870-28068040 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 0

Conread position: 120-289
Cow position: chrX:35285193-35285363 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 117, 0

Conread position: 124-289
Cow position: chrX:8642070-8642234 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 65

Conread position: 128-287
Cow position: chrX:2314591-2314431 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 109, 0

Conread position: 128-289
Cow position: chrX:23359083-23358928 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 130-289
Cow position: chrX:4091954-4092114 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 144-289
Cow position: chrX:41010942-41011081 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 16

Conread position: 145-289
Cow position: chrX:46068714-46068574 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 146-289
Cow position: chrX:42760298-42760442 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 152-289
Cow position: chrX:4169979-4169846 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 152-289
Cow position: chrX:47100545-47100405 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 84

Conread position: 156-289
Cow position: chrX:22552923-22552789 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 158-289
Cow position: chrX:6480538-6480406 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 161-262
Cow position: chrX:23187532-23187430 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 161-283
Cow position: chrX:42875273-42875392 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 161-283
Cow position: chrX:46533244-46533121 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 161-289
Cow position: chrX:5915249-5915380 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 161-289
Cow position: chrX:10237852-10237724 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 161-289
Cow position: chrX:11653831-11653956 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 161-289
Cow position: chrX:26882019-26881890 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 161-289
Cow position: chrX:31986513-31986383 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 161-289
Cow position: chrX:41166764-41166640 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 161-289
Cow position: chrX:41199285-41199411 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 35, 78

Conread position: 161-289
Cow position: chrX:45759732-45759858 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 121, 80

Conread position: 162-283
Cow position: chrX:27270437-27270556 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 80

Conread position: 162-283
Cow position: chrX:37867494-37867616 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 162-286
Cow position: chrX:31983523-31983392 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 162-289
Cow position: chrX:1960363-1960236 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 79, 98

Conread position: 162-289
Cow position: chrX:8326966-8327094 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 162-289
Cow position: chrX:8759688-8759812 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 24

Conread position: 162-289
Cow position: chrX:11589305-11589178 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 104

Conread position: 162-289
Cow position: chrX:17498384-17498512 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 162-289
Cow position: chrX:35681629-35681756 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 162-289
Cow position: chrX:37867315-37867443 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 162-289
Cow position: chrX:44995560-44995689 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 162-289
Cow position: chrX:48822280-48822153 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 163-288
Cow position: chrX:1938077-1938201 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 163-289
Cow position: chrX:51838-51713 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 163-289
Cow position: chrX:10278933-10279065 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 163-289
Cow position: chrX:14925335-14925462 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 163-289
Cow position: chrX:16770127-16770254 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 163-289
Cow position: chrX:16801200-16801076 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 34

Conread position: 163-289
Cow position: chrX:28106910-28107035 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 77, 90

Conread position: 163-289
Cow position: chrX:34270624-34270750 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 108

Conread position: 163-289
Cow position: chrX:34398721-34398594 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 163-289
Cow position: chrX:34754113-34753985 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 163-289
Cow position: chrX:35409815-35409941 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 39

Conread position: 163-289
Cow position: chrX:41215385-41215512 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 163-289
Cow position: chrX:42086890-42087017 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 163-289
Cow position: chrX:46909878-46909999 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 165-289
Cow position: chrX:28850788-28850907 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 165-289
Cow position: chrX:48574292-48574165 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 170-289
Cow position: chrX:11813143-11813263 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 170-289
Cow position: chrX:16763855-16763741 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 170-289
Cow position: chrX:33678403-33678281 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 170-289
Cow position: chrX:37749914-37749800 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 170-289
Cow position: chrX:39094252-39094141 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 171-288
Cow position: chrX:38346992-38347110 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 175-289
Cow position: chrX:231943-231832 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 175-289
Cow position: chrX:4486949-4486835 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 175-289
Cow position: chrX:42506874-42506757 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 178-283
Cow position: chrX:30958808-30958914 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 178-289
Cow position: chrX:11602407-11602295 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 178-289
Cow position: chrX:37717800-37717911 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 11

Conread position: 180-289
Cow position: chrX:35509599-35509491 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 71

Conread position: 182-289
Cow position: chrX:43028314-43028418 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 185-289
Cow position: chrX:19356548-19356653 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 186-289
Cow position: chrX:1996366-1996262 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 0

Show alignments to all cow chromosomes.