Cow genome map
| Conread name: | raor023_p21.y1 |
| Conread position: | 1-161 |
| Cow position: | chr1:28722215-28722378 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-161 |
| Cow position: | chr1:69536334-69536493 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 1-162 |
| Cow position: | chr1:31344978-31344815 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 1-162 |
| Cow position: | chr1:59672485-59672647 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 85, 31 |
| Conread position: | 1-169 |
| Cow position: | chr1:8971605-8971434 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 1-169 |
| Cow position: | chr1:69764392-69764562 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 29 |
| Conread position: | 1-184 |
| Cow position: | chr1:89478587-89478770 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 98, 126 |
| Conread position: | 1-193 |
| Cow position: | chr1:52323294-52323488 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 86, 52 |
| Conread position: | 1-207 |
| Cow position: | chr1:45096998-45097207 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-333 |
| Cow position: | chr1:40907516-40907845 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 1-342 |
| Cow position: | chr1:9382884-9382518 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-402 |
| Cow position: | chr1:72134829-72135223 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 283 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 88, 183 |
| Conread position: | 1-428 |
| Cow position: | chr1:30284232-30283791 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 300 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 84, 256 |
| Conread position: | 1-435 |
| Cow position: | chr1:97560079-97560536 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 84, 219 |
| Conread position: | 1-451 |
| Cow position: | chr1:8027782-8027306 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 289 |
| Conread position: | 1-453 |
| Cow position: | chr1:58223669-58224132 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 326 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 170, 72 |
| Conread position: | 1-492 |
| Cow position: | chr1:88758926-88759441 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 240 |
| Conread position: | 1-521 |
| Cow position: | chr1:30023830-30023288 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 372 |
| Conread position: | 1-542 |
| Cow position: | chr1:59210774-59210213 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 240 |
| Conread position: | 1-543 |
| Cow position: | chr1:87449314-87449878 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 111 |
| Conread position: | 1-553 |
| Cow position: | chr1:28802011-28801489 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 138 |
| Conread position: | 1-556 |
| Cow position: | chr1:76703954-76703439 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 364 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 295, 62 |
| Conread position: | 1-558 |
| Cow position: | chr1:18406776-18406250 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 166 |
| Conread position: | 1-558 |
| Cow position: | chr1:40514097-40513558 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 22 |
| Conread position: | 1-558 |
| Cow position: | chr1:55324131-55323580 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 219 |
| Conread position: | 1-558 |
| Cow position: | chr1:57655919-57656490 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 276 |
| Conread position: | 1-558 |
| Cow position: | chr1:62854417-62853902 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 222 |
| Conread position: | 1-558 |
| Cow position: | chr1:79637551-79636988 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 27 |
| Conread position: | 1-558 |
| Cow position: | chr1:85791060-85791629 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 238 |
| Conread position: | 1-558 |
| Cow position: | chr1:101149250-101149774 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 42 |
| Conread position: | 1-562 |
| Cow position: | chr1:56162692-56163270 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 1-563 |
| Cow position: | chr1:17013368-17012791 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 266 |
| Conread position: | 1-563 |
| Cow position: | chr1:86548761-86548189 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 1-564 |
| Cow position: | chr1:6708730-6708148 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 240 |
| Conread position: | 1-564 |
| Cow position: | chr1:8553687-8554274 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 290 |
| Conread position: | 1-564 |
| Cow position: | chr1:11292744-11292158 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 289 |
| Conread position: | 1-564 |
| Cow position: | chr1:13449552-13450154 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 1-564 |
| Cow position: | chr1:17942435-17941865 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 119 |
| Conread position: | 1-564 |
| Cow position: | chr1:18014795-18014244 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 351 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 72, 94 |
| Conread position: | 1-564 |
| Cow position: | chr1:18881023-18880447 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 52 |
| Conread position: | 1-564 |
| Cow position: | chr1:22000560-22000010 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 173 |
| Conread position: | 1-564 |
| Cow position: | chr1:33711460-33712009 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 115 |
| Conread position: | 1-564 |
| Cow position: | chr1:39543136-39543717 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 76 |
| Conread position: | 1-564 |
| Cow position: | chr1:40052720-40053301 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 104 |
| Conread position: | 1-564 |
| Cow position: | chr1:40685327-40684744 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 28 |
| Conread position: | 1-564 |
| Cow position: | chr1:43019489-43020069 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 210 |
| Conread position: | 1-564 |
| Cow position: | chr1:55775552-55776099 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 15 |
| Conread position: | 1-564 |
| Cow position: | chr1:61308376-61308948 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 76 |
| Conread position: | 1-564 |
| Cow position: | chr1:62924992-62925559 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 199 |
| Conread position: | 1-564 |
| Cow position: | chr1:63500852-63501404 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 370 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 39, 34 |
| Conread position: | 1-564 |
| Cow position: | chr1:71563207-71562632 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 249 |
| Conread position: | 1-564 |
| Cow position: | chr1:79921366-79920781 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 239 |
| Conread position: | 1-564 |
| Cow position: | chr1:80359805-80359224 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 276 |
| Conread position: | 1-564 |
| Cow position: | chr1:82563875-82564449 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 226 |
| Conread position: | 1-564 |
| Cow position: | chr1:82652007-82652582 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 121 |
| Conread position: | 1-564 |
| Cow position: | chr1:82919247-82918716 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 53 |
| Conread position: | 1-564 |
| Cow position: | chr1:88130151-88130704 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 175 |
| Conread position: | 1-564 |
| Cow position: | chr1:88634792-88635317 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 166 |
| Conread position: | 1-564 |
| Cow position: | chr1:89424951-89425533 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 190 |
| Conread position: | 1-564 |
| Cow position: | chr1:89740845-89740298 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 220 |
| Conread position: | 1-564 |
| Cow position: | chr1:91719278-91718688 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 290 |
| Conread position: | 1-564 |
| Cow position: | chr1:91898372-91898944 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 244 |
| Conread position: | 1-564 |
| Cow position: | chr1:101858566-101858038 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 158 |
| Conread position: | 2-563 |
| Cow position: | chr1:13645137-13645672 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 164 |
| Conread position: | 2-564 |
| Cow position: | chr1:52233682-52233166 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 165 |
| Conread position: | 3-558 |
| Cow position: | chr1:42289824-42290335 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 162 |
| Conread position: | 3-562 |
| Cow position: | chr1:87244204-87244737 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 70 |
| Conread position: | 3-564 |
| Cow position: | chr1:18244989-18244434 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 226 |
| Conread position: | 4-439 |
| Cow position: | chr1:11863882-11863439 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 220 |
| Conread position: | 4-456 |
| Cow position: | chr1:73071632-73071178 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 14 |
| Conread position: | 4-530 |
| Cow position: | chr1:53198156-53198705 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 103 |
| Conread position: | 4-555 |
| Cow position: | chr1:58335230-58335773 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 171 |
| Conread position: | 4-557 |
| Cow position: | chr1:67285902-67286428 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 195 |
| Conread position: | 6-559 |
| Cow position: | chr1:5318174-5318701 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 352 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 66, 81 |
| Conread position: | 7-373 |
| Cow position: | chr1:37455114-37455470 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 82, 144 |
| Conread position: | 7-451 |
| Cow position: | chr1:23050043-23050481 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 80, 159 |
| Conread position: | 7-500 |
| Cow position: | chr1:52173112-52172589 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 286 |
| Conread position: | 7-564 |
| Cow position: | chr1:89900287-89899756 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 166 |
| Conread position: | 7-564 |
| Cow position: | chr1:93853919-93854466 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 146 |
| Conread position: | 8-169 |
| Cow position: | chr1:68501391-68501555 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 8-532 |
| Cow position: | chr1:67903023-67902508 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 360 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 154, 59 |
| Conread position: | 8-562 |
| Cow position: | chr1:21086776-21087357 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 388 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 81, 178 |
| Conread position: | 8-564 |
| Cow position: | chr1:33850627-33851225 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 502 |
| Conread position: | 9-183 |
| Cow position: | chr1:77122173-77122004 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 9-224 |
| Cow position: | chr1:53364101-53364318 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 77 |
| Conread position: | 9-557 |
| Cow position: | chr1:34688759-34689276 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 75 |
| Conread position: | 11-557 |
| Cow position: | chr1:20828284-20828828 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 185 |
| Conread position: | 12-564 |
| Cow position: | chr1:25887722-25887211 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 177 |
| Conread position: | 13-433 |
| Cow position: | chr1:3934739-3934348 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 76, 152 |
| Conread position: | 13-564 |
| Cow position: | chr1:31395803-31396359 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 251 |
| Conread position: | 13-564 |
| Cow position: | chr1:42735862-42736403 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 160 |
| Conread position: | 13-564 |
| Cow position: | chr1:62245246-62244702 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 161 |
| Conread position: | 13-564 |
| Cow position: | chr1:67835748-67835193 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 13-564 |
| Cow position: | chr1:72187468-72186927 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 101 |
| Conread position: | 13-564 |
| Cow position: | chr1:72980687-72981213 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 162 |
| Conread position: | 16-403 |
| Cow position: | chr1:72079890-72080265 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 151 |
| Conread position: | 16-468 |
| Cow position: | chr1:94659285-94659735 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 127 |
| Conread position: | 16-543 |
| Cow position: | chr1:76623536-76623023 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 136 |
| Conread position: | 16-558 |
| Cow position: | chr1:8824475-8824999 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 57 |
| Conread position: | 16-562 |
| Cow position: | chr1:3386590-3386063 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 61 |
| Conread position: | 16-562 |
| Cow position: | chr1:56194523-56193988 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 16-564 |
| Cow position: | chr1:13254020-13253492 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 16-564 |
| Cow position: | chr1:25180623-25180085 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 132 |
| Conread position: | 16-564 |
| Cow position: | chr1:25549472-25550009 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 114 |
| Conread position: | 16-564 |
| Cow position: | chr1:49974779-49974245 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 121 |
| Conread position: | 16-564 |
| Cow position: | chr1:57367724-57367187 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 159 |
| Conread position: | 16-564 |
| Cow position: | chr1:57567368-57567896 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 20 |
| Conread position: | 16-564 |
| Cow position: | chr1:62806395-62805860 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 126 |
| Conread position: | 16-564 |
| Cow position: | chr1:63606375-63605836 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 16-564 |
| Cow position: | chr1:76546130-76545597 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 135 |
| Conread position: | 16-564 |
| Cow position: | chr1:79336386-79335859 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 157 |
| Conread position: | 16-564 |
| Cow position: | chr1:85781366-85780832 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 106 |
| Conread position: | 16-564 |
| Cow position: | chr1:85881159-85881688 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 159 |
| Conread position: | 16-564 |
| Cow position: | chr1:86699812-86699272 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 18-563 |
| Cow position: | chr1:76753239-76752708 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 155 |
| Conread position: | 18-564 |
| Cow position: | chr1:33550332-33550864 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 150 |
| Conread position: | 18-564 |
| Cow position: | chr1:79457557-79457022 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 132 |
| Conread position: | 19-564 |
| Cow position: | chr1:102435618-102435081 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 25-169 |
| Cow position: | chr1:102548582-102548729 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 25-564 |
| Cow position: | chr1:5501395-5501921 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 148 |
| Conread position: | 25-564 |
| Cow position: | chr1:100597964-100597436 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 53 |
| Conread position: | 28-558 |
| Cow position: | chr1:69923046-69922523 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 148 |
| Conread position: | 28-564 |
| Cow position: | chr1:69402411-69402938 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 147 |
| Conread position: | 41-235 |
| Cow position: | chr1:87208195-87208002 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 111 |
| Conread position: | 45-470 |
| Cow position: | chr1:99995689-99995239 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 221 |
| Conread position: | 46-386 |
| Cow position: | chr1:56722537-56722902 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 46-562 |
| Cow position: | chr1:1461885-1461383 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 119 |
| Conread position: | 56-500 |
| Cow position: | chr1:72119608-72120034 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 119 |
| Conread position: | 58-450 |
| Cow position: | chr1:37420524-37420140 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 126 |
| Conread position: | 66-564 |
| Cow position: | chr1:98661829-98661350 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 341 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 85-564 |
| Cow position: | chr1:97227228-97226760 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 64 |
| Conread position: | 90-564 |
| Cow position: | chr1:28872562-28873023 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 74 |
| Conread position: | 104-564 |
| Cow position: | chr1:31366595-31366131 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 47 |
| Conread position: | 142-559 |
| Cow position: | chr1:30027995-30027602 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 40 |
| Conread position: | 147-562 |
| Cow position: | chr1:56722660-56723098 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 121 |
| Conread position: | 150-564 |
| Cow position: | chr1:17037018-17036612 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 46 |
| Conread position: | 150-564 |
| Cow position: | chr1:55276946-55276540 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 116 |
| Conread position: | 150-564 |
| Cow position: | chr1:56489380-56489785 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 116 |
| Conread position: | 164-564 |
| Cow position: | chr1:29950751-29950364 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 55 |
| Conread position: | 189-523 |
| Cow position: | chr1:42176807-42176495 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 190-492 |
| Cow position: | chr1:32342469-32342169 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 72 |
| Conread position: | 192-564 |
| Cow position: | chr1:68607972-68607602 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 8 |
| Conread position: | 204-564 |
| Cow position: | chr1:38414396-38414746 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 206-558 |
| Cow position: | chr1:38388034-38387707 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 218-558 |
| Cow position: | chr1:69766072-69766404 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 223-564 |
| Cow position: | chr1:89771070-89770737 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 33 |
| Conread position: | 235-558 |
| Cow position: | chr1:69536517-69536844 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 231 |
| Conread position: | 257-564 |
| Cow position: | chr1:59674127-59674435 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 114 |
| Conread position: | 258-501 |
| Cow position: | chr1:28722431-28722675 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 215 |
| Conread position: | 258-530 |
| Cow position: | chr1:40953350-40953622 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 36, 160 |
| Conread position: | 258-564 |
| Cow position: | chr1:45097364-45097648 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 59, 43 |
| Conread position: | 258-564 |
| Cow position: | chr1:57661181-57661486 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 258-564 |
| Cow position: | chr1:72656622-72656927 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 126 |
| Conread position: | 258-564 |
| Cow position: | chr1:89809987-89809676 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 217 |
| Conread position: | 258-564 |
| Cow position: | chr1:97123472-97123778 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 157 |
| Conread position: | 264-564 |
| Cow position: | chr1:87207778-87207471 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 198 |
| Conread position: | 287-557 |
| Cow position: | chr1:54366139-54365882 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 21 |
| Conread position: | 293-564 |
| Cow position: | chr1:33895354-33895625 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 175 |
| Conread position: | 295-524 |
| Cow position: | chr1:56144652-56144425 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 172 |
| Conread position: | 301-558 |
| Cow position: | chr1:40307755-40308004 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 65 |
| Conread position: | 320-552 |
| Cow position: | chr1:99349315-99349084 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 323-545 |
| Cow position: | chr1:29361715-29361935 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 347-564 |
| Cow position: | chr1:102548967-102549176 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 349-564 |
| Cow position: | chr1:52359545-52359330 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 119 |
| Conread position: | 363-558 |
| Cow position: | chr1:72136390-72136581 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 372-557 |
| Cow position: | chr1:98783810-98783993 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 372-564 |
| Cow position: | chr1:22864162-22863972 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 377-563 |
| Cow position: | chr1:82407579-82407400 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
Show alignments to all cow chromosomes.